prot_E-fasciculatus_F_contig12704.2063.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12704.2063.1
Unique Nameprot_E-fasciculatus_F_contig12704.2063.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length245
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12704.2063.1 vs. uniprot
Match: D7FZ11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ11_ECTSI)

HSP 1 Score: 436 bits (1121), Expect = 7.390e-144
Identity = 234/244 (95.90%), Postives = 239/244 (97.95%), Query Frame = 0 
Query:    1 VGEGGGSLDGGEQTVVAKMLLRSAQMAAAEAKTGRRAAAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSRVKDAFLMSNSPLVMDAAASSLGWFLNADHAKRAEVQAVAQGMVEELFAKVSALCQQDQKAAPTPAKGKARGAGGKGRWKDTGIALASSFRRLRCLAGCTDASGCVDSTTLSEAWEGVEGAVRRRCLLDEVL 244
            VGEGGGSLDGGEQTVVAKMLLRSAQMAAAEAKTGRRAAAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSR+KDAFLMSNSPLVMDAAASSLGWFLNADHAKRAEV+AV QGMVEELFAKVSALCQQDQKA  TPAKGKA+GAGGKGRWKDTGI LA+SFRRLRCLAGCTDASGCVD TTLSEAWEGV+GAVRRRCLLDEVL
Sbjct:   38 VGEGGGSLDGGEQTVVAKMLLRSAQMAAAEAKTGRRAAAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSRMKDAFLMSNSPLVMDAAASSLGWFLNADHAKRAEVKAVVQGMVEELFAKVSALCQQDQKA--TPAKGKAKGAGGKGRWKDTGIGLANSFRRLRCLAGCTDASGCVDGTTLSEAWEGVQGAVRRRCLLDEVL 279
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BLAST of mRNA_E-fasciculatus_F_contig12704.2063.1 vs. uniprot
Match: A0A6H5J7R4_9PHAE (SCD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R4_9PHAE)

HSP 1 Score: 422 bits (1086), Expect = 7.310e-135
Identity = 227/244 (93.03%), Postives = 234/244 (95.90%), Query Frame = 0 
Query:    1 VGEGGGSLDGGEQTVVAKMLLRSAQMAAAEAKTGRRAAAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSRVKDAFLMSNSPLVMDAAASSLGWFLNADHAKRAEVQAVAQGMVEELFAKVSALCQQDQKAAPTPAKGKARGAGGKGRWKDTGIALASSFRRLRCLAGCTDASGCVDSTTLSEAWEGVEGAVRRRCLLDEVL 244
            VG+GGGSLDGGEQTVVAKMLL SAQMAAAEAKTGRR AAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSR+KDAFLMSNSPLVMDAAA+SLGWFLNADHAKRAEVQAVAQGMVEELFAKVS LC QDQKA  TPA+GKA+GAGGKGRWKDTGI LA+SFRRLRCLAGCTD SGCVD TTLSEAWEGV+GAVRRRCLL EVL
Sbjct:  467 VGDGGGSLDGGEQTVVAKMLLLSAQMAAAEAKTGRRTAAGYQLGKEAKQEVREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVSGSGKGAFSDLVSRMKDAFLMSNSPLVMDAAAASLGWFLNADHAKRAEVQAVAQGMVEELFAKVSTLCLQDQKA--TPARGKAKGAGGKGRWKDTGIGLANSFRRLRCLAGCTDVSGCVDDTTLSEAWEGVQGAVRRRCLLAEVL 708
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12704.2063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZ11_ECTSI7.390e-14495.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7R4_9PHAE7.310e-13593.03SCD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039662Cohesin subunit Scc3/SAPANTHERPTHR11199STROMAL ANTIGENcoord: 7..219
NoneNo IPR availablePANTHERPTHR11199:SF0LD34181P-RELATEDcoord: 7..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12704contigE-fasciculatus_F_contig12704:694..3585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12704.2063.1mRNA_E-fasciculatus_F_contig12704.2063.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12704 694..3585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12704.2063.1 ID=prot_E-fasciculatus_F_contig12704.2063.1|Name=mRNA_E-fasciculatus_F_contig12704.2063.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=245bp
VGEGGGSLDGGEQTVVAKMLLRSAQMAAAEAKTGRRAAAGYQLGKEAKQE
VREAVAELAEACLTHLPNLLAKYQSDDAKLALLAELPTCIPSEALASLVS
GSGKGAFSDLVSRVKDAFLMSNSPLVMDAAASSLGWFLNADHAKRAEVQA
VAQGMVEELFAKVSALCQQDQKAAPTPAKGKARGAGGKGRWKDTGIALAS
SFRRLRCLAGCTDASGCVDSTTLSEAWEGVEGAVRRRCLLDEVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039662Cohesin_Scc3/SA