prot_E-fasciculatus_F_contig127.2060.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig127.2060.1
Unique Nameprot_E-fasciculatus_F_contig127.2060.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length150
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig127.2060.1 vs. uniprot
Match: D7FM02_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM02_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 5.600e-89
Identity = 141/149 (94.63%), Postives = 144/149 (96.64%), Query Frame = 0 
Query:    1 MCYPAYCLGAWCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGARLMCFCSVCLMPCLHIAQMRAEVAFRKHGKPTVCPXXXXXXXXXXXXGETTYKEEDLDYPRDDGVKRPHAIEEAXXXXEGGKRVELTPEKEVEVVLDYPR 149
            MCYPAYCLGA CPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGARLMCFCSVCLMPCLHI+QMRAEVAFRKHGK TVCPXXXXXXXXXXXXGETTYKEE+LDYPRDDGVKRPHAIE  XXXX GGKRVELTPEKEV+VVLDYPR
Sbjct:   91 MCYPAYCLGASCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGARLMCFCSVCLMPCLHISQMRAEVAFRKHGKATVCPXXXXXXXXXXXXGETTYKEEELDYPRDDGVKRPHAIEXXXXXXXGGKRVELTPEKEVKVVLDYPR 239
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig127.2060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM02_ECTSI5.600e-8994.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig127contigE-fasciculatus_F_contig127:38362..38811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig127.2060.1mRNA_E-fasciculatus_F_contig127.2060.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig127 38362..38832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig127.2060.1 ID=prot_E-fasciculatus_F_contig127.2060.1|Name=mRNA_E-fasciculatus_F_contig127.2060.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=150bp
MCYPAYCLGAWCPCCVGDTRELVAEKYNLPIVSWDPDEFGWCFVKMIGAR
LMCFCSVCLMPCLHIAQMRAEVAFRKHGKPTVCPCCCCGCGGGKGPGETT
YKEEDLDYPRDDGVKRPHAIEEADYPREGGKRVELTPEKEVEVVLDYPR*
back to top