prot_E-fasciculatus_F_contig12680.2048.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12680.2048.1
Unique Nameprot_E-fasciculatus_F_contig12680.2048.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length340
Homology
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 568 bits (1463), Expect = 7.900e-201
Identity = 298/337 (88.43%), Postives = 306/337 (90.80%), Query Frame = 0
Query:    4 TPAPTSASREVASTTTAPAAPAITPSPVGTPXXXXMXXXXVIVATTAAPTPAAGEPGSPGVPPTPVPAKTVCDPDAALSFTYDSREEDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            TPAPT  SREV STTTAPA            XXXX XXXX +V       PA GEPGSPGVPP PVPAKTVCDP A LSFTYD+RE DEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTM+LKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDE+LLTAHILADDS+GDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMV+SELGHMGYFASESYGITWKVRGFC DM+NPEVFDNV VYGDITNCDIHHMWYGMYSYGHQGGVWTD+LMH
Sbjct:   45 TPAPTPGSREVPSTTTAPA------XXXXXXXXXXXXXXXXVVTAXXXXXPATGEPGSPGVPPIPVPAKTVCDPAAELSFTYDARE-DEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMH 374          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 1.400e-178
Identity = 247/260 (95.00%), Postives = 256/260 (98.46%), Query Frame = 0
Query:   81 LSFTYDSREEDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            LSFTYD+RE DEEIEG+LVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTM+LKGTSVGGDCDELKIRSS TLIHAVRGHGGNLDIYKTLIQSWDE+LLTAHILADDS+GDEPRSYIAC+SEVVNENDTCDSGYAREDKGECRMDMV+SELGHMGYFASESYGITWKVRGFC DM+NPEVFDNV VYGDITNCDIHHMWYGMYSYGHQGGVWTD+LMH
Sbjct:   51 LSFTYDARE-DEEIEGALVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTSVGGDCDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMH 309          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 3.390e-93
Identity = 154/283 (54.42%), Postives = 196/283 (69.26%), Query Frame = 0
Query:   60 GSPGVPPTPVPAKTVCDPDAALSFTYDSREEDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNEND-TCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPE-VFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            GSPG PPTPVP K VCD  A LSF Y      E+ +  LVT+ HASGDR+E GC+TLT+++ WL + P  VPT +L  VD  T  A+    T    TG+WL+ TS+ ++NGVT ++KGTS+GGDCDELK  S+    + + GHGGN+DI  T+++SWD      HIL D   G   RS+IAC SEVV + D TCD G A+ D GECRMD+V+S + + GY  +ESYGITWKVRG C D++N + +FD+V+VYGD+ N DI+ MWYG YSYGH GGVWTD LMH
Sbjct:  320 GSPGFPPTPVPDKVVCDDSAELSFVYTL----EDTKRPLVTVAHASGDRSEAGCLTLTKLYDWLATEPADVPTGMLLTVDSTTETAVN--GTTATPTGIWLLDTSVVITNGVTFEIKGTSIGGDCDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCD-GTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMH 595          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 3.160e-82
Identity = 140/286 (48.95%), Postives = 194/286 (67.83%), Query Frame = 0
Query:   62 PGVPPTPVPAKTVCDPDAALSFTYDSREEDEEIEGS----LVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSV-GGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSS-GDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPE-VFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            PG PPTPVP +  CDP A ++F+Y       ++E S    L+TI H S DR E GC   + +W+W+++    V  +LLYP DP TG A TT       TGVWL+RTS+ V+NGV  ++ GT   GGD D++ + SSPT    +RG GG+L  Y+T + SW E+ L  H L DD+  G EPRSYI C SE++ E  TCD G A++++GECRMD++ES + ++GY A+ESYG++WKVRG CTD++N + +FD+V+VYGD+ + DI+ +WYG YSYGH GG+WT+  MH
Sbjct:  215 PGTPPTPVPPRVTCDPAAVVAFSY-------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKAQDADVQ-ELLYPADPTTGEADTTGGAA---TGVWLLRTSVDVTNGVMFEVMGTQAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCD-GVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMH 488          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 7.600e-80
Identity = 147/306 (48.04%), Postives = 202/306 (66.01%), Query Frame = 0
Query:   47 ATTAAPTPAAGEPGS-----PGVPPTPVPAKTVCDPDAALSFTYDSREEDEEIEGS----LVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSV-GGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSS-GDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPE-VFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            A  AAP P+A    +     PG PPTPVP +  CDP A ++F+Y       ++E S    L+TI H S DR E GC   + +W+W+++    V  +LLYP DP TG A TT       TGVWL+RTS+ V+NGV  ++ GT   GGD D++ + SSPT    +RG GG+L  Y+T + SW E+ L  H+L DD+  G EPRSYI C SE++ E  TCD G A++++GECRMD++ES + ++GY A+ESYG++WKVRG C D++N + +F++V+VYGDI N DI+ +WYG YSYGH GGVWT+  MH
Sbjct:  391 AAEAAPVPSATSSATESGEIPGTPPTPVPLRVTCDPAAVVAFSY-------KLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDADVQ-ELLYPADPTTGEADTTGGAA---TGVWLLRTSVDVTNGVMFEVMGTEAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCD-GVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMH 684          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 4.920e-61
Identity = 112/233 (48.07%), Postives = 147/233 (63.09%), Query Frame = 0
Query:  112 GCVTLTEMWQW---LQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRS-SPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            GC TL++++ W     +G    P  +L   D     A TT       TG WL+   L V+ G T+  +G  VGG+C EL+IRS S +    +RGHGGNL    T++ SWD D         D      RS+I C SEV+   DTC    A  + GECRMD+++SE+G++GY ASE+YGITWKVRGFC+D++NP+VFD+V VYGD+   DIHHM+YGMYS+GHQGGVWT+ LMH
Sbjct:   10 GCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTT-------TGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG-----RSFIRCVSEVLTGEDTC----AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMH 226          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.290e-56
Identity = 105/241 (43.57%), Postives = 146/241 (60.58%), Query Frame = 0
Query:  101 IEHASGDRTELGCVTLTEMWQWLQS-GPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            +E A    T  GCVTL ++W+     GP       LY VDP +G   T+A      TG WL+   L V +G+T+++ G+  GGD DEL++ S+      +R HGG+LD   T + SWD    +     D++ G   RSYI+  SE++ + D    G A+   GE RMD+  SE+G++GY+ SESYG+TWKVRGFC D +NPEVFD+V VYG++ + DIHHM +G+Y+YGHQ G W    MH
Sbjct:   57 LESADNGTTRGGCVTLGQIWESRAGKGP-------LYAVDPDSGNVSTSA------TGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPD--EDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMH 279          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 7.830e-56
Identity = 109/244 (44.67%), Postives = 150/244 (61.48%), Query Frame = 0
Query:  107 DRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSS-PTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVR---------GFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            D    GC TLT+++ +  +  +G     LY +D  +G+ IT  ++V   T  WL+   L V+NG      G+  GGDCDEL+I+S+ P   + VRGHGG++    T++ SWD             + +  RS++ C SE +   +TCD G A+ D GECRMD++ SE+G+MG+F SESYG+TWKVR         GFC D++NP+VF+   VYGDI N DIHHM+YG YSYGHQGGVWT+  MH
Sbjct:   16 DAESEGCFTLTDLYNFRGTENDGSSKGPLYMLD-GSGSKITAPTSV---TKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQ-----ETYEGGRSFLNCVSEKLT-GETCD-GMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMH 248          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.870e-55
Identity = 105/241 (43.57%), Postives = 145/241 (60.17%), Query Frame = 0
Query:  101 IEHASGDRTELGCVTLTEMWQWLQS-GPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            +E A    T  GCVTL ++W+     GP       LY VDP +G   T+A      TG WL+   L V +G+T+ + G+  GGD DEL++ S+      +R HGG+LD   T + SWD    +     D++ G   RSYI+  SE++ + D    G A+   GE RMD+  SE+G++GY+ SESYG+TWKVRGFC D +NPEVFD+V VYG++ + DIHHM +G+Y+YGHQ G W    MH
Sbjct:   57 LESADNGTTRGGCVTLGQIWESRAGKGP-------LYAVDPDSGNVSTSA------TGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPD--EDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMH 279          
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 8.860e-55
Identity = 110/270 (40.74%), Postives = 155/270 (57.41%), Query Frame = 0
Query:   71 AKTVCDPDAALSFTYDSREEDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNPEVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH 340
            +K  CD D A+S  Y S  +        + +E A G+ T  GCVTL ++W+   +     P   LY VDP +G      +  E  TG WL+   L V +G+T+ + GT  GGD DEL++ S+      +R HGG+LD   T + SWD    +     D++ G   RSYI+  SE++ + D    G A+   GE RMD+  SE+G++G+  SESYG+TWKVRGFC D +NP +FD V VYG++ + DIHHM +G+Y+YGHQ G W    MH
Sbjct:   38 SKPDCDSDIAVSIRYASSTK-------RLYLESADGE-TRGGCVTLGQIWE---NRAGKAP---LYAVDPESG------NESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPD--EDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMH 282          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12680.2048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNF4_9PHAE7.900e-20188.43MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWW1_ECTSI1.400e-17895.00Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G257_ECTSI3.390e-9354.42Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G261_ECTSI3.160e-8248.95Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5J745_9PHAE7.600e-8048.04MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7FRR8_ECTSI4.920e-6148.07Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI1.290e-5643.57Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JGU8_9PHAE7.830e-5644.67MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G339_ECTSI3.870e-5543.57Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE8.860e-5540.74MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 141..340
e-value: 7.1E-40
score: 139.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12680contigE-fasciculatus_F_contig12680:12..3589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12680.2048.1mRNA_E-fasciculatus_F_contig12680.2048.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12680 12..3589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12680.2048.1 ID=prot_E-fasciculatus_F_contig12680.2048.1|Name=mRNA_E-fasciculatus_F_contig12680.2048.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=340bp
AASTPAPTSASREVASTTTAPAAPAITPSPVGTPAPVAMTASPVIVATTA
APTPAAGEPGSPGVPPTPVPAKTVCDPDAALSFTYDSREEDEEIEGSLVT
IEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTAS
TVEELTGVWLVRTSLAVSNGVTMDLKGTSVGGDCDELKIRSSPTLIHAVR
GHGGNLDIYKTLIQSWDEDLLTAHILADDSSGDEPRSYIACSSEVVNEND
TCDSGYAREDKGECRMDMVESELGHMGYFASESYGITWKVRGFCTDMTNP
EVFDNVQVYGDITNCDIHHMWYGMYSYGHQGGVWTDTLMH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold