prot_E-fasciculatus_F_contig12663.2035.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12663.2035.1
Unique Nameprot_E-fasciculatus_F_contig12663.2035.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length66
Homology
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: D7FSA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA5_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 5.220e-31
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 60
            VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR
Sbjct:  774 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 833          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 5.220e-31
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 60
            VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR
Sbjct:  693 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 752          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.070e-16
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVE--GRMTAKQVEDR 60
            VK+ARLYLLSDILHNSSAPV+ AS+YRT LQ  LP+IF+ LN  FR VE  GRM+A+ +E++
Sbjct:  583 VKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEK 644          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.080e-16
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    1 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVE--GRMTAKQVEDR 60
            VK+ARLYLLSDILHNSSAPV+ AS+YRT LQ  LP+IF+ LN  FR VE  GRM+A+ +E++
Sbjct:  583 VKLARLYLLSDILHNSSAPVQHASTYRTLLQACLPQIFEHLNRIFRDVERLGRMSARSLEEK 644          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A118JTZ7_CYNCS (CID domain-containing protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JTZ7_CYNCS)

HSP 1 Score: 79.7 bits (195), Expect = 7.230e-16
Identity = 35/65 (53.85%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    2 KIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRSVLVFE 66
            K+ARL L+SDILHNSSAPVK ASSYRT  +  LP+I +  N+ +RG+ GR+TA+ +++R + V +
Sbjct:  497 KVARLMLVSDILHNSSAPVKNASSYRTKFEAALPDILESFNDLYRGITGRITAEALKERVLKVLQ 561          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A836CAC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC0_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 9.870e-16
Identity = 34/60 (56.67%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 60
            V +ARLYL+SD+LHNS+APV+ A+S+RT LQ  LP++F+ L  A RG+ GR+TA+Q+ +R
Sbjct:  601 VIVARLYLVSDVLHNSAAPVRNATSFRTLLQSCLPQVFEALGTALRGIAGRLTARQLRER 660          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A0U9HP58_KLENI (RNA recognition motif (RRM)-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HP58_KLENI)

HSP 1 Score: 79.3 bits (194), Expect = 9.890e-16
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    2 KIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDR 60
            K+ARL L+SDILHNSSAPVK AS+YRT LQ  LP+IF+  NE  R V GRMTA+ ++ R
Sbjct:  494 KVARLMLVSDILHNSSAPVKNASAYRTLLQARLPDIFESFNETLRNVTGRMTAEALKAR 552          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A392PU32_9FABA (U2 snRNP-associated SURP motif-containing protein-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PU32_9FABA)

HSP 1 Score: 74.3 bits (181), Expect = 1.060e-15
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    2 KIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRSVLVFE 66
            KIARL L+SDILHNSSAPV+ AS+YRT  +  LP+I +  N+ +R + GR+TA+ +++R + V +
Sbjct:   31 KIARLMLVSDILHNSSAPVRNASAYRTKFEATLPDIMESFNDLYRSIMGRITAEALKERVLKVLQ 95          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: A0A2J6LMV1_LACSA (Uncharacterized protein n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LMV1_LACSA)

HSP 1 Score: 78.6 bits (192), Expect = 1.840e-15
Identity = 34/65 (52.31%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    2 KIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRSVLVFE 66
            K+ARL L+SDILHNSSAPVK AS+YRT  +  LP+I +  N+ +RG+ GR+TA+ +++R + V +
Sbjct:  496 KVARLMLVSDILHNSSAPVKNASAYRTKFEANLPDILESFNDLYRGITGRITAEALKERVLKVLQ 560          
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Match: UPI001CC3BA1D (protein RRC1-like isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3BA1D)

HSP 1 Score: 78.6 bits (192), Expect = 1.840e-15
Identity = 34/65 (52.31%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    2 KIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEGRMTAKQVEDRSVLVFE 66
            K+ARL L+SDILHNSSAPVK AS+YRT  +  LP+I +  N+ +RG+ GR+TA+ +++R + V +
Sbjct:  501 KVARLMLVSDILHNSSAPVKNASAYRTKFEAALPDIMESFNDLYRGITGRITAEALKERVLKVLQ 565          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12663.2035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSA5_ECTSI5.220e-31100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCR2_9PHAE5.220e-31100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WJA8_9STRA2.070e-1666.13Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WJ81_9STRA2.080e-1666.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A118JTZ7_CYNCS7.230e-1653.85CID domain-containing protein n=1 Tax=Cynara cardu... [more]
A0A836CAC0_9STRA9.870e-1656.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0U9HP58_KLENI9.890e-1664.41RNA recognition motif (RRM)-containing protein n=1... [more]
A0A392PU32_9FABA1.060e-1550.77U2 snRNP-associated SURP motif-containing protein-... [more]
A0A2J6LMV1_LACSA1.840e-1552.31Uncharacterized protein n=2 Tax=Lactuca sativa Tax... [more]
UPI001CC3BA1D1.840e-1552.31protein RRC1-like isoform X1 n=2 Tax=Telopea speci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 1..64
e-value: 1.8E-8
score: 36.3
NoneNo IPR availablePANTHERPTHR23140:SF0SWAP/SURP DOMAIN-CONTAINING PROTEINcoord: 2..65
NoneNo IPR availablePANTHERPTHR23140RNA PROCESSING PROTEIN LD23810Pcoord: 2..65
IPR006569CID domainPROSITEPS51391CIDcoord: 1..66
score: 16.259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12663contigE-fasciculatus_F_contig12663:2877..3788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12663.2035.1mRNA_E-fasciculatus_F_contig12663.2035.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12663 2877..3788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12663.2035.1 ID=prot_E-fasciculatus_F_contig12663.2035.1|Name=mRNA_E-fasciculatus_F_contig12663.2035.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=66bp
VKIARLYLLSDILHNSSAPVKKASSYRTHLQKGLPEIFDGLNEAFRGVEG
RMTAKQVEDRSVLVFE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS