prot_E-fasciculatus_F_contig12557.1957.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12557.1957.1
Unique Nameprot_E-fasciculatus_F_contig12557.1957.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length497
Homology
BLAST of mRNA_E-fasciculatus_F_contig12557.1957.1 vs. uniprot
Match: D8LB82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB82_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 4.750e-73
Identity = 291/448 (64.96%), Postives = 294/448 (65.62%), Query Frame = 0
Query:   67 SHAPRAARPPPVPGVAPRAGGNRVWVNAEAGAPSNGSSSAARQTAPAPARGSAAQAAVISTKSKTGNRNRVWTN----------TSKVATKTPVGRPXXXXXXXXXXXXXXXXXXQRRGPGHNRVWTKATAGRGETAAGPARSDSRGVAPASSAGSSGSSSTARSRKEQPQSVGAAAISSRNAHSSVQ---EASPRVTPASSPRAALSKAPAXXXXXXXXXXXXXXXPSSPTKTVARYSGSAAGRSPATTSAAVTAPAPSALTLALSKAPATTTVRPKPVAAAPPSSPTKPVARYSG----LAGGRISATTAAAVAVPALAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGAHGSKSKAFGXXXXXXXXXXXXXXXXXXXXXXXXXGTGAGVRGRYKSPRGGLLASQGGWGAWRFNDRG 497
            SH P AA P PVPG APRAG NRVWVNAEAG PSNG SSA RQT  A ARGSAAQA VISTKSKTGNRNRVWTN          TS VATK PVG  XXXXXXXXXXXXXX     RRGPGHN VWTKAT GRGETA GPARSDSRGVAPASSAG +G+SSTARS KEQP S GA AISSRNAHSSV     AS RVTPA  P AA      XXXXXXXXXXXXXXX SSPTK VARYSGSA GRS ATT+AAVTAP                          PPSSPTKPVARYSG                          XXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXARGGAH SKSKAFG                     XXXX   AG RGRYKSPRG LLASQGGW AW FN RG
Sbjct:   22 SHVPGAASPSPVPGTAPRAGVNRVWVNAEAGGPSNGPSSATRQTTTALARGSAAQA-VISTKSKTGNRNRVWTNSSTTAAQIAGTSNVATKKPVGXXXXXXXXXXXXXXXXSAAQPRRGPGHNLVWTKAT-GRGETAGGPARSDSRGVAPASSAGGNGNSSTARSWKEQPPSAGATAISSRNAHSSVAGGAAASSRVTPA--PLAAAVSKXXXXXXXXXXXXXXXXXXSSPTKPVARYSGSAVGRSSATTAAAVTAPXXXXXXXXXXXXXXXXXXXXXXXXXXPPSSPTKPVARYSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRRAAAAAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGAHCSKSKAFGRGGAVGRTFGRAGRGVVAWRGXXXXXXXAGARGRYKSPRG-LLASQGGWAAWHFNGRG 464          
BLAST of mRNA_E-fasciculatus_F_contig12557.1957.1 vs. uniprot
Match: A0A6H5KC32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC32_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 5.840e-66
Identity = 261/487 (53.59%), Postives = 270/487 (55.44%), Query Frame = 0
Query:   67 SHAPRAARPPPVPGVAPRAGGNRVWVNAEAGAPSNGSSSAARQTAPAPARGSAAQAAVISTKSKTGNRNRVWTN---------TSKVATKTPVGRPXXXXXXXXXXXXXXXXXXQRRGPGHNRVWTKATAGRGETAAGPARSDSRGVAPASSAGSSGSSSTARSRKEQPQSVGAAAISSRNAHSSVQ---EASPRVTPASSPRAALSKAPAXXXXXXXXXXXXXXXPSSPTKTVARYSGSAAGRSPATTSAA--------------------------------------------VTAPAPSALTLALSKAPATTTVRPKPVAAAPPSSPTKPVARYSGLAGGRISATTAAAVAVPALAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGAHGSKSKAFGXXXXXXXXXXXXXXXXXXXXXXXXXGTGAGVRGRYKSPRGGLLASQGGWGAWRFNDRG 497
            SH P AA P PVPGVAPR GGNRVWVNAEAG PSNG SSA RQT P  ARGSAAQA VISTK K GNRNRVWTN         TS VATK PVGRP                   RRGPGHN VWTKAT  RGE A GPARSDSRGVAPASS GS+ +SSTAR+ KEQ  S  A A+S RNAHSSV     AS RVTP S   AA+SKAP XXXXXXXXXXXXXX PSSPTK VARYSGSA GRS AT +                                              V AP+        S AP TT+   KP+           VARYSG A                                   XXXXXXXXXXXX              X XXXXXXXX  ARGGAHGSKSKAFG     XXXXXXXXX         X GTGAG RGRYKSPRG LLASQGGWGAW FN RG
Sbjct:   59 SHVPGAASPSPVPGVAPRVGGNRVWVNAEAGGPSNGPSSATRQTTPTLARGSAAQA-VISTKYKAGNRNRVWTNSSTAAQIAGTSNVATKKPVGRPPPPSTHVAAYRGGASAAQPRRGPGHNLVWTKATR-RGEAAGGPARSDSRGVAPASSEGSNQTSSTARTWKEQSLSAWATAVSIRNAHSSVAGGAAASSRVTP-SPLAAAVSKAPXXXXXXXXXXXXXXXPPSSPTKPVARYSGSAVGRSSATIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPS------GASPAPVTTS---KPL-----------VARYSGSAASXXX------------------------------XXXXXXXXXXXXATRAGKGPPSRQTGXQXXXXXXXXAAARGGAHGSKSKAFGRGGEAXXXXXXXXXDMVAWSVRGXTGTGAGARGRYKSPRG-LLASQGGWGAWYFNGRG 491          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12557.1957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB82_ECTSI4.750e-7364.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC32_9PHAE5.840e-6653.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12557contigE-fasciculatus_F_contig12557:2283..3965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12557.1957.1mRNA_E-fasciculatus_F_contig12557.1957.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12557 2267..3965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12557.1957.1 ID=prot_E-fasciculatus_F_contig12557.1957.1|Name=mRNA_E-fasciculatus_F_contig12557.1957.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=497bp
MVLLTYSGGRGRGGESAAAAAGRGGRSFPASRGRGRGRSMSWKRQTPPPV
PPDRPAAAAAAAAVAVSHAPRAARPPPVPGVAPRAGGNRVWVNAEAGAPS
NGSSSAARQTAPAPARGSAAQAAVISTKSKTGNRNRVWTNTSKVATKTPV
GRPPPPSTPAAAFRGGASSAQQRRGPGHNRVWTKATAGRGETAAGPARSD
SRGVAPASSAGSSGSSSTARSRKEQPQSVGAAAISSRNAHSSVQEASPRV
TPASSPRAALSKAPAAAAAAAAAAPAAAAPPSSPTKTVARYSGSAAGRSP
ATTSAAVTAPAPSALTLALSKAPATTTVRPKPVAAAPPSSPTKPVARYSG
LAGGRISATTAAAVAVPALAPVPVTTSKPLVARYSGSAASQQRRAAAAVA
TRAGKGPPSKQAGGQQVARYSGTAAARGGAHGSKSKAFGRGGAAGRSFAR
TGRDMVAWRGRGRTGTGAGVRGRYKSPRGGLLASQGGWGAWRFNDRG
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