prot_E-fasciculatus_F_contig1255.1955.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1255.1955.1
Unique Nameprot_E-fasciculatus_F_contig1255.1955.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length195
Homology
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: D8LQ56_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ56_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 3.980e-114
Identity = 187/194 (96.39%), Postives = 189/194 (97.42%), Query Frame = 0
Query:    1 MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKNNSD 194
            MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQ     DKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLA+XXXXXXXXXXVPIA+HAKNNSD
Sbjct:   37 MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQ-----DKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNSD 225          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A835YU71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU71_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.270e-69
Identity = 119/214 (55.61%), Postives = 152/214 (71.03%), Query Frame = 0
Query:    1 MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVF-----------------------QNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKN 191
            +S+P+ FVEP +RY+ EG +  +HFVADDSNR+Y+ VTDK+YPAR+AF LL+E Q+KFLTKVG+KSL+AKE  LSRTM+SSF+D+C+KYDD++NVD++A+VQ      KVD VK  M++NI QMLANEE L+ IS NAENLNEQA+                         QNRS+ALRR MRCKA+KMW LLA           VP+AM++KN
Sbjct:   38 ISSPNVFVEPGRRYTNEGDVCCVHFVADDSNRVYTVVTDKQYPARVAFALLDEVQSKFLTKVGEKSLSAKEDTLSRTMRSSFADICLKYDDVKNVDKLASVQG-----KVDAVKTKMEENISQMLANEETLESISANAENLNEQARXXXXXXXXXXXXXXXXXXXXXXXXXQNRSTALRRNMRCKALKMWFLLAFVITIVLIIIIVPLAMYSKN 246          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A7S2XW80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW80_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.130e-36
Identity = 64/117 (54.70%), Postives = 88/117 (75.21%), Query Frame = 0
Query:   13 RYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEE 129
            RYS EG  F++HFV D+ +R+Y  +T K+YP+R+AFTLLEE Q+KFL KVGD+SL+ KEGGL+ T K  F+++C +Y+D+   D++AAVQ      KVDVVK  M+DNI +ML N+E
Sbjct:    1 RYSTEGVEFTLHFVGDERHRLYCVITAKDYPSRVAFTLLEELQSKFLDKVGDRSLSVKEGGLNGTCKKMFTNICHRYEDVEGADKLAAVQG-----KVDVVKSIMEDNISKMLKNQE 112          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A7R9Z383_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z383_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.750e-27
Identity = 66/177 (37.29%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   16 VEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKNN 192
            V+  +  + + AD      + +T  +YP+R+A  +L E   ++  + G ++ +A    L++  K   S +C KYDD+ NVD+     AS    KV+ VKV MQDNI  ML N E+ + ++E ++ LNEQA VF+ +S+ LR+QMRCK +KM L+L            VP+ M AKNN
Sbjct:  123 VQSEVHQVVYGADTDGLCLAVITGLQYPSRVAIQMLVELYGQYSEQFGLQAKSATTNSLTKKSKPMLSTMCNKYDDLSNVDK-----ASSLIGKVEEVKVQMQDNIAAMLKNTEQAESLAERSDALNEQASVFKKKSTDLRKQMRCKNLKMTLILVFLIVGILAIILVPLIMKAKNN 294          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: W7U318_9STRA (R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U318_9STRA)

HSP 1 Score: 111 bits (278), Expect = 5.930e-27
Identity = 67/187 (35.83%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    8 VEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKNNSD 194
            V P   +S      S H ++D   RI+  ++++ YP R A   LEE Q  FL K G KSL  KE GL ++       LC KYD++  VD++AAV      +KVD VK+ +Q+N+Q  LAN   LD I + AE+L  QA +F+  ++ L++QM  K ++M +++ +          +PIA+ +K   D
Sbjct:   49 VRPGVHFSFASGGSSWHLMSDVEGRIFILISERTYPVRAAHACLEEFQRSFLAKTGTKSLEVKEKGLDKSSGEMLRKLCEKYDNLAEVDKLAAVM-----NKVDAVKLVLQENVQVALANCVALDNIEKAAEDLQAQAGMFKRNATTLKKQMCWKQLRMKMVMGLAILAILLVIIIPIAVASKRMHD 230          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A6V2A733_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A733_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.290e-25
Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 0
Query:   16 VEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHA 189
            V+  +  + + AD      + +T ++YP+R+A  +L E   +F    G ++ +A    L++  K   S +C KY D+ NVD+     AS   DKVD VK++MQDNI  ML N E+ + +++ +E LNEQA VF+ +S+ L++QM+CK +KM ++L +          VP+ + A
Sbjct:  104 VQSTVHQVVYGADMDGLCLAVITGQKYPSRVAIQMLTELYGQFSQNFGLQAKSATTNSLTKKSKPMLSSICKKYSDLNNVDK-----ASALIDKVDQVKISMQDNIAVMLKNTEQAETLADKSEQLNEQATVFKKKSTDLKKQMKCKNLKMTIILGLLIFGILAVILVPLILKA 272          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A7S3Q7P0_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7P0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.570e-24
Identity = 65/178 (36.52%), Postives = 95/178 (53.37%), Query Frame = 0
Query:   16 VEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKNNS 193
            V+     + +  D      + VT   YP+R+A  +L E   ++ TK+GD+   A    L+R  K   +  C KYDD+ NVD+     AS    KVD VKV MQDNI  ML N E+ + IS+ A  LNE   VF+ +S+ L+RQM+CK +KM +++A+          +P+   AK  S
Sbjct:   82 VQSDAHQVVYGGDSDGLCLAVVTGLRYPSRVATQMLTECYGEYSTKMGDEIKDAATNSLNRKSKPILTKFCKKYDDVNNVDK-----ASALIGKVDGVKVQMQDNIATMLQNMEQTEAISDQANQLNEXXXVFKKQSTDLKRQMKCKNLKMTIIVAVLVLGILLVILLPLISKAKKAS 254          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A7S2KAE4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAE4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.940e-24
Identity = 56/177 (31.64%), Postives = 99/177 (55.93%), Query Frame = 0
Query:   16 VEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAMXXXXXXXXXXVPIAMHAKNN 192
            VE  +  + + AD   R  + +T  +YP+R+A  ++ E    F+ K G  +++A    L++       + C KYDD+ +VD+ ++V      +KV+ VK+ MQDNI  ML N E  +++ + +  LNEQA VF+  S+ L++ M+CK +KM +LL +          VP+ + A+++
Sbjct:   83 VESTVHQVTYGADGDGRCIAVITGLQYPSRVAVQMITELHKTFIEKFGLMAMSATTNSLTKKATPMLKEACKKYDDLSSVDKTSSV-----LEKVEGVKIQMQDNIAAMLVNTETAEELQDKSSQLNEQASVFKKNSTTLKKHMKCKNLKMTILLVLVVVGVLAIILVPLILRAQDD 254          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: T0S118_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S118_SAPDV)

HSP 1 Score: 104 bits (260), Expect = 5.370e-24
Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = 0
Query:    8 VEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAM 172
            V P  R++++      HF  D+   +Y  +T  +YP R+AF LL   Q +   K   K  T KEGGL +      S +   YDD   VD++A V A     +VD VK TMQ+NIQ +L+N E+++ + + + +L+EQAKVF+N   +L R M  K +K+ + L +
Sbjct:   55 VAPNSRHTLDCEPNKFHFTMDNDEIVYVAITAADYPVRLAFKLLAAVQEEMTGKHAAKLPTVKEGGLDKECAKGLSVIATTYDDRTKVDKLAEVMA-----QVDAVKSTMQENIQVVLSNTEKMEMVEQKSNDLSEQAKVFRNTGKSLSRAMWWKNVKLTIALGL 214          
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Match: A0A1V9ZD85_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD85_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.210e-23
Identity = 58/165 (35.15%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    8 VEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTLLEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLAM 172
            V P  +++++      HF  D+   +Y  +T  +YP R+AF L+   Q +  +K   K +TAK+ GL +    S S +  +YDD   VD++A V A     +VD VK TMQ+NIQ +L+N E+++ + + + +L+EQAKVF+N   +L R M  K +KM + + +
Sbjct:  569 VTPNSKHTLDCEPNKFHFTLDNDELVYCAITAADYPIRLAFKLIAAVQEEITSKYASKIMTAKDNGLDKDCAKSLSVIATQYDDRTKVDKIAEVMA-----QVDAVKSTMQENIQVVLSNTEKMETVEQKSNDLSEQAKVFRNTGKSLSRAMYWKNLKMTIAIGL 728          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1255.1955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ56_ECTSI3.980e-11496.39Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YU71_9STRA2.270e-6955.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XW80_9STRA3.130e-3654.70Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7R9Z383_9STRA2.750e-2737.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W7U318_9STRA5.930e-2735.83R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxI... [more]
A0A6V2A733_9STRA8.290e-2534.48Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3Q7P0_9STRA2.570e-2436.52Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S2KAE4_9STRA2.940e-2431.64Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
T0S118_SAPDV5.370e-2436.36Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9ZD85_9STRA1.210e-2335.15Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..158
NoneNo IPR availableGENE3D1.20.5.110coord: 99..186
e-value: 7.9E-21
score: 75.6
NoneNo IPR availableGENE3D3.30.450.50coord: 6..98
e-value: 2.7E-14
score: 55.3
NoneNo IPR availablePANTHERPTHR21136SNARE PROTEINScoord: 13..183
NoneNo IPR availablePANTHERPTHR21136:SF168GENE, 35911-RELATEDcoord: 13..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 188..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..165
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 104..162
NoneNo IPR availableTMHMMTMhelixcoord: 166..188
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 107..126
score: 28.51
coord: 127..146
score: 24.73
coord: 163..182
score: 32.3
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 103..185
e-value: 1.8E-23
score: 82.1
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 102..162
score: 10.926
IPR010908Longin domainPFAMPF13774Longincoord: 12..69
e-value: 1.6E-11
score: 44.1
IPR010908Longin domainPROSITEPS50859LONGINcoord: 1..86
score: 13.737
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 9..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1255contigE-fasciculatus_F_contig1255:14354..17896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1255.1955.1mRNA_E-fasciculatus_F_contig1255.1955.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1255 13316..17902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1255.1955.1 ID=prot_E-fasciculatus_F_contig1255.1955.1|Name=mRNA_E-fasciculatus_F_contig1255.1955.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=195bp
MSNPDTFVEPRKRYSVEGRMFSIHFVADDSNRIYSCVTDKEYPARIAFTL
LEEAQTKFLTKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAA
VQASQTFDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQN
RSSALRRQMRCKAIKMWLLLAMVVIILLIIIIVPIAMHAKNNSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011012Longin-like_dom_sf
IPR010908Longin_dom
IPR001388Synaptobrevin