prot_E-fasciculatus_F_contig12477.1905.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12477.1905.1
Unique Nameprot_E-fasciculatus_F_contig12477.1905.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length94
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12477.1905.1 vs. uniprot
Match: D7FW95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW95_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 5.350e-48
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0 
Query:    1 LTIAAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWGSVDTLATLIAQGADMFATDRQGRTALDWSRIARRDKAARILERAMENEIRYRR 93
            LT+AAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWG VDTLATLIA+GADMFATDRQGRTALDWSRIARRDKAARILERAMENEIRYRR
Sbjct:   48 LTLAAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWGHVDTLATLIAEGADMFATDRQGRTALDWSRIARRDKAARILERAMENEIRYRR 140
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BLAST of mRNA_E-fasciculatus_F_contig12477.1905.1 vs. uniprot
Match: A0A6H5L2H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H6_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 5.970e-47
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0 
Query:    1 LTIAAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWGSVDTLATLIAQGADMFATDRQGRTALDWSRIARRDKAARILERAMENEIRYRR 93
            LT+AAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWG VDTLATLIA+GADMF TDRQGRTALDWSRIARRDKAARILERAMENEIRYRR
Sbjct:   17 LTLAAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWGHVDTLATLIAEGADMFTTDRQGRTALDWSRIARRDKAARILERAMENEIRYRR 109
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BLAST of mRNA_E-fasciculatus_F_contig12477.1905.1 vs. uniprot
Match: A0A5A8CKZ0_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKZ0_CAFRO)

HSP 1 Score: 51.2 bits (121), Expect = 5.000e-6
Identity = 29/68 (42.65%), Postives = 47/68 (69.12%), Query Frame = 0 
Query:    4 AAAAGKTSDVVRSIELGGDVD-TTLNTFTPLMRAATWGSVDTLATLIAQGADMFATDRQGRTALDWSR 70
            AA AG T +V R ++ G  V+ + +   TPLMRAAT+G V+++  L+ +GAD+ A D+ G++A+D S+
Sbjct:   18 AAEAGNTGEVTRLLKAGAPVNWSNVYRQTPLMRAATFGHVESIQVLLDRGADLEAKDKAGKSAIDLSK 85
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12477.1905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FW95_ECTSI5.350e-4896.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2H6_9PHAE5.970e-4795.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5A8CKZ0_CAFRO5.000e-642.65Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..92
e-value: 7.8E-14
score: 53.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..83
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..81
e-value: 3.5E-6
score: 27.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 28..66
score: 12.037
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 28..60
score: 10.045

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12477contigE-fasciculatus_F_contig12477:1735..2016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12477.1905.1mRNA_E-fasciculatus_F_contig12477.1905.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12477 1735..2016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12477.1905.1 ID=prot_E-fasciculatus_F_contig12477.1905.1|Name=mRNA_E-fasciculatus_F_contig12477.1905.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=94bp
LTIAAAAGKTSDVVRSIELGGDVDTTLNTFTPLMRAATWGSVDTLATLIA
QGADMFATDRQGRTALDWSRIARRDKAARILERAMENEIRYRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf