prot_E-fasciculatus_F_contig1236.1819.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1236.1819.1
Unique Nameprot_E-fasciculatus_F_contig1236.1819.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length614
Homology
BLAST of mRNA_E-fasciculatus_F_contig1236.1819.1 vs. uniprot
Match: D7FJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW1_ECTSI)

HSP 1 Score: 698 bits (1801), Expect = 4.500e-245
Identity = 432/548 (78.83%), Postives = 438/548 (79.93%), Query Frame = 0
Query:    6 AHRCAQGAEDAVRKGDHAEATELHLAAARDFLRAAEQARKNGRVQEHGVLASSLLLLADSHAARAEKGAIRLRLSGEGRGSLNSSLSSSRDLTPAEAYRAAATGVKAAGKGDGRRENVVXXXXXXXXHSVGPDMDDSIMRGTAATGNAVEAKGGGVDAAAELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRHPSVGAPQLSSPLGDSFFFLNKSVIFGGPGTGGNGLVAIGGPANAYGNGNGPAAGIVLGSPGTRLGVATSPGGGGG--RSTSAPRRFNESDASPEGEPLMTSGRR-------TRADGRVADGA-------------------QGGGNGADRPLTGGGGAWTGESVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGEIMRLLTCLKTLGDENVFLMKECEDRDKASASTAVRQESKSIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASAAGGASTSDPAKTAEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXXXHHPSF 525
            AHRCAQGAEDA RKGDHAEATELHLAAARDFLRAAEQ      VQEHGVLASSLLLLADSHAARAEKGAIRLRLSGEGRGSLN+SLSSSRDLTPAEAYRAAA GVKA GKGDGRRENVVXXXXXXX HSVGPDMDDSIMRGT A GNAVEAKGGG DAAAELA+KFRPQRDDLLELERQLAKLGLESKMGGPGGRARQR  S GAP LSS LGDSFFFLNKSVIFGG G GGNG      PANAYGNGNGPAAG VLGSPGTRLGV   PGGGGG  RSTSAPRRFNESD SPEG P + SGR        TRADGRVA G                    QG G+GADRP  G GG W GES G                            AQQGEIMRLLTCLKTLGDENV LMKECEDRDK      VRQES++IREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASA GGASTSDPAKT EEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXX HHPSF
Sbjct:   15 AHRCAQGAEDACRKGDHAEATELHLAAARDFLRAAEQ------VQEHGVLASSLLLLADSHAARAEKGAIRLRLSGEGRGSLNNSLSSSRDLTPAEAYRAAAAGVKATGKGDGRRENVVXXXXXXXSHSVGPDMDDSIMRGTVANGNAVEAKGGGCDAAAELAQKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRLSSGGAPHLSSALGDSFFFLNKSVIFGGGGAGGNG------PANAYGNGNGPAAG-VLGSPGTRLGVTNPPGGGGGGWRSTSAPRRFNESDTSPEGAPQIPSGRGSDNVGDGTRADGRVAGGGETPRVGNTVGRGADTARRVQGPGSGADRPSAGAGGVWAGESAGEGGGGEGRPALLLSSAEEEARRVREEE-AQQGEIMRLLTCLKTLGDENVSLMKECEDRDK------VRQESEAIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASATGGASTSDPAKTTEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXXAHHPSF 542          
BLAST of mRNA_E-fasciculatus_F_contig1236.1819.1 vs. uniprot
Match: A0A6H5KVB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVB2_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 9.850e-182
Identity = 320/413 (77.48%), Postives = 325/413 (78.69%), Query Frame = 0
Query:  139 MDDSIMRGTAATGNAVEAKGGGVDAAAELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRHPSVGAPQLSSPLGDSFFFLNKSVIFGGPGTGGNGLVAIGGPANAYGNGNGPAAGIVLGSPGTRLGVATSPGGGGGRSTSAPRRFNESDASPEGEPLMTSGRR-------TRADGRVADGA-------------------QGGGNGADRPLTGGGGAWTGESVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGEIMRLLTCLKTLGDENVFLMKECEDRDKASASTAVRQESKSIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASAAGGASTSDPAKTAEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXXXHHPSF 525
            MDDSIMRGTAA GNAVEA GGG DAAAELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQR  S GAP LSS LGDSFFFLNKSVIFGG G GGNGLVA+GGPANAYGNGNGPAAG VLGSPGTR GV   PGGGGGRSTSAPRRFNE DASPEG P + SGR        TRADGRVA G                    QG G GADRP  G GGAW GES                              AQQGEIMRLLTCLKTLGDENV LMKECE+RDKASASTAVRQES++IREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASAAGG STSDPAKT EEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXX HHPSF
Sbjct:    1 MDDSIMRGTAANGNAVEANGGGCDAAAELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGRARQRLSSGGAPHLSSALGDSFFFLNKSVIFGGAGAGGNGLVAVGGPANAYGNGNGPAAG-VLGSPGTRPGVTNPPGGGGGRSTSAPRRFNEGDASPEGAPQIPSGRGSDNVGDGTRADGRVAGGGEIPRVGNTVGRGADTARRVQGPGCGADRPSAGAGGAWAGESA-REGGGGEGRPSLLLSSAEEEARRVREEEAQQGEIMRLLTCLKTLGDENVSLMKECEERDKASASTAVRQESEAIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAAPGTASAAGGTSTSDPAKTVEEVQRLTQTNRKLTEQVKKYENYYKELCLKAESKRKEQLSQAKAARXXXXAHHPSF 411          
BLAST of mRNA_E-fasciculatus_F_contig1236.1819.1 vs. uniprot
Match: W7TZI2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZI2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.110e-7
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:  372 QQGEIMRLLTCLKTLGDENVFLMKECEDRDKASASTAVRQESKSIREEMKRFQLKYHERFTLLKKTLDEVMRSYP 446
            QQGE++RLL C+KTLGDEN  L+K  ED ++A      RQE++ IR E   FQ  Y +RF  L+  L+E    YP
Sbjct:  356 QQGEVVRLLACMKTLGDENALLIKRAEDGERA------RQENERIRRETLEFQELYAKRFKGLRAALEEFREKYP 424          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1236.1819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJW1_ECTSI4.500e-24578.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVB2_9PHAE9.850e-18277.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TZI2_9STRA7.110e-748.00Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 472..517
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 404..610
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 404..610

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1236contigE-fasciculatus_F_contig1236:12899..19171 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1236.1819.1mRNA_E-fasciculatus_F_contig1236.1819.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1236 12899..19171 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1236.1819.1 ID=prot_E-fasciculatus_F_contig1236.1819.1|Name=mRNA_E-fasciculatus_F_contig1236.1819.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=614bp
SRAPQAHRCAQGAEDAVRKGDHAEATELHLAAARDFLRAAEQARKNGRVQ
EHGVLASSLLLLADSHAARAEKGAIRLRLSGEGRGSLNSSLSSSRDLTPA
EAYRAAATGVKAAGKGDGRRENVVGRGDGRSSHSVGPDMDDSIMRGTAAT
GNAVEAKGGGVDAAAELAKKFRPQRDDLLELERQLAKLGLESKMGGPGGR
ARQRHPSVGAPQLSSPLGDSFFFLNKSVIFGGPGTGGNGLVAIGGPANAY
GNGNGPAAGIVLGSPGTRLGVATSPGGGGGRSTSAPRRFNESDASPEGEP
LMTSGRRTRADGRVADGAQGGGNGADRPLTGGGGAWTGESVGGGGGGGEG
RPASVLSSAEEEARRAREEEAQQGEIMRLLTCLKTLGDENVFLMKECEDR
DKASASTAVRQESKSIREEMKRFQLKYHERFTLLKKTLDEVMRSYPQLAA
PGTASAAGGASTSDPAKTAEEVQRLTQTNRKLTEQVKKYENYYKELCLKA
ESKRKEQLSQAKAARQQQLAHHPSFSQQQQQQQQQQAPQQQQQQQRVQRR
LSPAPAVPRRTQQQQQQQQQQPSSNNKILPLTTNSTTPHFPSNTSDKASN
SSSSSNNNNNRESS
back to top