prot_E-fasciculatus_F_contig12299.1770.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12299.1770.1
Unique Nameprot_E-fasciculatus_F_contig12299.1770.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length316
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12299.1770.1 vs. uniprot
Match: D7FHX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX2_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 2.240e-98
Identity = 180/238 (75.63%), Postives = 187/238 (78.57%), Query Frame = 0 
Query:   96 VRIPLLRVNALGYQVPAGSVILEYMLVPGIPQPVAPVSTEE--SLSGVAARSTPLLREG--------------VDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGSKPLLPA--AAAGDAGATLWQSGPLPSLEQQQQSTTGKXXXXXXXXXXXXXXXXXXXXSCKKCQVKVTKEGTLALTRGREELAVFSPAW 315
            +R+P +     G QVPAGSVILEYMLVPGIPQPVAPVSTE   SLSG+AAR+T   RE               +DELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARG KPLL A  AAAGDAGATLWQSGPLPSL QQQQ + GK           XXXX     SCKKCQVKVTKEGTLALTRGREELAVFSPAW
Sbjct:  109 LRLPTVGPKLEGSQVPAGSVILEYMLVPGIPQPVAPVSTETEGSLSGLAARTTAPFREDGGNDGSRGGVGSCCMDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTAGAAAAGDAGATLWQSGPLPSLTQQQQRSPGKPGDNGKDKSGGXXXX-----SCKKCQVKVTKEGTLALTRGREELAVFSPAW 341
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12299.1770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX2_ECTSI2.240e-9875.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12299contigE-fasciculatus_F_contig12299:85..4076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12299.1770.1mRNA_E-fasciculatus_F_contig12299.1770.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12299 85..4077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12299.1770.1 ID=prot_E-fasciculatus_F_contig12299.1770.1|Name=mRNA_E-fasciculatus_F_contig12299.1770.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=316bp
RHAKTEPPSSAAGGGDSENDDDDDLRLPTAGPKLEVFCYSRGSPAKGAVA
APAGDCGVPPGGGEGGRKETEKVEIGRAHVTLVADGGGGAGSHARVRIPL
LRVNALGYQVPAGSVILEYMLVPGIPQPVAPVSTEESLSGVAARSTPLLR
EGVDELKKPARKPALLACVGAVIAAVLAVRLSGVCSARMPTDLSPIPVPF
KVAVGKHKGSSTHHIRLQGDGNVVVARGSKPLLPAAAAGDAGATLWQSGP
LPSLEQQQQSTTGKSGDNGKSKGGGGSGGSGGGGSCKKCQVKVTKEGTLA
LTRGREELAVFSPAWA
back to top