prot_E-fasciculatus_F_contig1220.1713.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1220.1713.1
Unique Nameprot_E-fasciculatus_F_contig1220.1713.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length34
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1220.1713.1 vs. uniprot
Match: D8LM24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM24_ECTSI)

HSP 1 Score: 44.3 bits (103), Expect = 9.260e-5
Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 0 
Query:    1 MHAARVWGSLPRDPIVGSDTADEITGTLFAHI 32
            MHAARV G LPRDPIVG +TADE+  T+   +
Sbjct:   19 MHAARVSGWLPRDPIVGCNTADEMAWTVLRGV 50
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1220.1713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM24_ECTSI9.260e-562.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1220contigE-fasciculatus_F_contig1220:18644..18745 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1220.1713.1mRNA_E-fasciculatus_F_contig1220.1713.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1220 18644..18775 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1220.1713.1 ID=prot_E-fasciculatus_F_contig1220.1713.1|Name=mRNA_E-fasciculatus_F_contig1220.1713.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=34bp
MHAARVWGSLPRDPIVGSDTADEITGTLFAHIE*
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