prot_E-fasciculatus_F_contig12163.1683.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12163.1683.1
Unique Nameprot_E-fasciculatus_F_contig12163.1683.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length194
Homology
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 4.660e-120
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRL+QFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ
Sbjct:  146 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 339          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 5.050e-119
Identity = 189/190 (99.47%), Postives = 190/190 (100.00%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRL 190
            MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRL+QFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRL
Sbjct:  155 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLSQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRL 344          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.610e-91
Identity = 151/199 (75.88%), Postives = 170/199 (85.43%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEG-----ARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M YCRD V LLALVDDNM+AQ+A LRDK D++VATPARLVAHLKAGN+ LKD VETLVVDEADLVLS+GY +DIR VT  LPK+CQGFLMSATLS ELE+LKRV+LHSPA+LKLEEG        G L QF+L+L +  DK LVVFAF+KLGLLEGKGLFFVN T++ YRLKLFLEQFH+RSAVLNAELPL SRLHIL+
Sbjct:  112 MAYCRDIVGLLALVDDNMSAQQAQLRDKPDIVVATPARLVAHLKAGNITLKDAVETLVVDEADLVLSYGYRDDIRHVTAHLPKVCQGFLMSATLSEELEELKRVILHSPAILKLEEGDASGGGEGGALLQFFLALREPADKNLVVFAFLKLGLLEGKGLFFVNATDACYRLKLFLEQFHIRSAVLNAELPLASRLHILE 310          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A4D9D1T0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1T0_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.190e-81
Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 0
Query:    2 HYCRDQVSLLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            +YCRD VS+ AL+       M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +++TLV+DEADL+LSFGY ED++ V   LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG  DG L QFY+SL +  DK L+VF F+KLG+LEGKGLFFVN  ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ
Sbjct:  136 YYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASLQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPE-ADKLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ 331          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: W7TVX7_9STRA (Putative atp-dependent rna helicase ddx56 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVX7_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.180e-77
Identity = 135/197 (68.53%), Postives = 162/197 (82.23%), Query Frame = 0
Query:    2 HYCRDQVSLLALVDDN----MAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            +YCRD VS+ AL+       M+AQ+A LRD+ D+LVATP+RLV+HL+AGN+ LK +V+TLV+DEADL+LSFGY ED++ V   LP+I QG LMSATLS EL+DLKRVVLHSPAVLKLEEG  DG L QFY+SL +  DK L+VF F+KLG+LEGKGLFFVN  ++ YRLKLFLEQF +RSAVLNAELPLNSRLH LQ
Sbjct:  136 YYCRDVVSVQALLGGGDAAAMSAQQALLRDQPDLLVATPSRLVSHLQAGNISLKASVQTLVMDEADLILSFGYEEDVKRVVAALPRIYQGILMSATLSPELDDLKRVVLHSPAVLKLEEGRTDGELLQFYVSLPE-ADKLLLVFVFLKLGVLEGKGLFFVNGLDACYRLKLFLEQFSIRSAVLNAELPLNSRLHTLQ 331          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A5D6XSV1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV1_9STRA)

HSP 1 Score: 246 bits (629), Expect = 5.720e-75
Identity = 127/194 (65.46%), Postives = 159/194 (81.96%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M+YC D VSLLAL   +M AQ+A LRD  DV+VATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY EDIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEGA DG+L Q++L++    DK L+++A IKLG+++GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++
Sbjct:  119 MYYCSDVVSLLALGGQSMNAQQALLRDVPDVVVATPGRLVAHLEAGNIKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQSFCMSATLSPELEKLKKSVLHNPAVVKLEEGATDGKLQQYFLAVP-AADKDLLLYALIKLGVVQGKVIFFVNSTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE 311          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A662YEI0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEI0_9STRA)

HSP 1 Score: 246 bits (627), Expect = 2.470e-74
Identity = 127/194 (65.46%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M+YC D VSLLAL   +M+AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY ED+RA+   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYL + D  DK L+++A ++LG++ GK +FFVN T ++YRLKLF EQF ++SAVLNA+LP NSR HI++
Sbjct:  118 MYYCSDVVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDVRAIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPV-DAADKDLLLYALLRLGVVHGKVIFFVNTTATAYRLKLFFEQFVIKSAVLNAQLPHNSRQHIIE 310          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: K3WG30_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG30_GLOUD)

HSP 1 Score: 245 bits (626), Expect = 3.790e-74
Identity = 125/194 (64.43%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M+YC D VSLLAL   +M AQ+A LRD  D+++ATP RLVAHL+AGN++LKD+V+TLV+DEADLVLSFGY EDIR +   LPK CQ F MSATLS ELE LK+ VLH+PAV+KLEEG  DG+L Q+YL ++ + DK L+++A IKLG++ GK +FFVN TE++YRLKLF EQF ++SAVLNAELP NSR HI++
Sbjct:  125 MYYCNDVVSLLALGGQSMNAQQALLRDVPDIIIATPGRLVAHLEAGNLKLKDSVQTLVIDEADLVLSFGYGEDIRTIFNHLPKACQNFCMSATLSPELEKLKKSVLHNPAVVKLEEGETDGKLQQYYLPVS-QADKELLLYALIKLGVIHGKVIFFVNTTEAAYRLKLFFEQFIIKSAVLNAELPHNSRQHIIE 317          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA)

HSP 1 Score: 244 bits (623), Expect = 7.920e-74
Identity = 127/194 (65.46%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M+YC+D VSLLAL   +M AQ+A LRD  DVLVATP RLVAHL+AGN+ LKD+V+T+V+DEADLVLSFGY EDIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYLS+    DK L+++A ++LG++ GK +FFVN T+++YRLKLF EQF ++SAVLNA+LP NSR HI++
Sbjct:  116 MYYCQDTVSLLALGSQSMNAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKDSVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLSVKAV-DKDLLLYALLRLGVVSGKVIFFVNSTDAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE 308          
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Match: H3GBC9_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GBC9_PHYRM)

HSP 1 Score: 244 bits (622), Expect = 9.930e-74
Identity = 126/194 (64.95%), Postives = 158/194 (81.44%), Query Frame = 0
Query:    1 MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVELKDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELEDLKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLEGKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ 194
            M+YC+D VSLLAL   +M+AQ+A LRD  DVLVATP RLVAHL+AGN+ LK++V+T+V+DEADLVLSFGY EDIR +   LPK CQ F MSATLS ELE LKR VLH+PAV+KLEEGA DG+L QFYL +    DK L+++A ++LG++ GK +FFVN TE++YRLKLF EQF ++SAVLNA+LP NSR HI++
Sbjct:  116 MYYCQDTVSLLALGGQSMSAQQALLRDAPDVLVATPGRLVAHLEAGNLTLKESVQTVVIDEADLVLSFGYGEDIRTIFNALPKACQTFCMSATLSPELEKLKRSVLHNPAVVKLEEGATDGKLQQFYLPVKP-ADKDLLLYALLRLGVVSGKVIFFVNSTEAAYRLKLFFEQFVIKSAVLNAKLPHNSRQHIIE 308          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12163.1683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE7_ECTSI4.660e-12099.48DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KX88_9PHAE5.050e-11999.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDE1_9STRA2.610e-9175.88DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4D9D1T0_9STRA8.190e-8168.02Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TVX7_9STRA1.180e-7768.53Putative atp-dependent rna helicase ddx56 n=1 Tax=... [more]
A0A5D6XSV1_9STRA5.720e-7565.46Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A662YEI0_9STRA2.470e-7465.46Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
K3WG30_GLOUD3.790e-7464.43Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3M6VU95_9STRA7.920e-7465.46Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
H3GBC9_PHYRM9.930e-7464.95Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 12..100
e-value: 2.3E-14
score: 53.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 136..194
e-value: 2.1E-5
score: 24.8
NoneNo IPR availableGENE3D3.40.50.300coord: 120..194
e-value: 3.9E-8
score: 34.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..119
e-value: 3.4E-24
score: 87.2
NoneNo IPR availablePANTHERPTHR24031:SF96ATP-DEPENDENT RNA HELICASE DDX56-RELATEDcoord: 18..194
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 18..194
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..112
score: 14.483
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12163contigE-fasciculatus_F_contig12163:320..4008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12163.1683.1mRNA_E-fasciculatus_F_contig12163.1683.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12163 293..4008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12163.1683.1 ID=prot_E-fasciculatus_F_contig12163.1683.1|Name=mRNA_E-fasciculatus_F_contig12163.1683.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=194bp
MHYCRDQVSLLALVDDNMAAQEAALRDKADVLVATPARLVAHLKAGNVEL
KDTVETLVVDEADLVLSFGYSEDIRAVTKRLPKICQGFLMSATLSAELED
LKRVVLHSPAVLKLEEGARDGRLAQFYLSLADKGDKFLVVFAFIKLGLLE
GKGLFFVNETESSYRLKLFLEQFHVRSAVLNAELPLNSRLHILQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom