prot_E-fasciculatus_F_contig12076.1620.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12076.1620.1
Unique Nameprot_E-fasciculatus_F_contig12076.1620.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length343
Homology
BLAST of mRNA_E-fasciculatus_F_contig12076.1620.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.040e-87
Identity = 259/344 (75.29%), Postives = 266/344 (77.33%), Query Frame = 0
Query:    4 GGGSSHAGEVFRGNESLHLRRLLRVVEHGASLLDKNDDVDAAATPAXXXXXXXXXXXGEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----PGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGQKASFILSPEEAAWIRRGLELPMQAMGNTQPSLKEADKGRLESFRLRQACALKRSRRAARECFEEAVAGAGGRLDGREGGLGATPKTRRWSERLSPHSASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSDKAGVARAVCLARLCQVLLQPELCLRGPGG 342
            GGGSSHA E FRGNESLHLRRLLRVVEHG SLLD N+DVDAAATPA     XXXXXX    XXXXXXXXXXXXXXXXX                         PGDG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXX   +K+SF+LSPEEA WIRRGLELPMQAMGNTQP LKEADKGRLESFRLRQA ALKR R+AARECFEEA AG            G   KT  WSERLSP SASALESVWE DAVWPLMQTPLLSWDLTTLLVG VSMARSWS++AGVARAVCLARLCQ LLQPELCLRGPGG
Sbjct:  832 GGGSSHAREAFRGNESLHLRRLLRVVEHGTSLLDHNNDVDAAATPAVAASTXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVAGGNAGAVSAAQEQLQGAAAVLPGDGDGRDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGRIXXXXXXXXXXXXXXXXXXXXXXXXXGQKKSSFVLSPEEATWIRRGLELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAG------------GLASKTSSWSERLSPESASALESVWEPDAVWPLMQTPLLSWDLTTLLVGSVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGG 1163          
BLAST of mRNA_E-fasciculatus_F_contig12076.1620.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 2.120e-83
Identity = 260/341 (76.25%), Postives = 269/341 (78.89%), Query Frame = 0
Query:    5 GGSSHAGEVFRGNESLHLRRLLRVVEHGASLLDKNDDVDAAATPAXXXXXXXXXXXGEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGQK---ASFILSPEEAAWIRRGLELPMQAMGNTQPSLKEADKGRLESFRLRQACALKRSRRAARECFEEAVAGAGGRLDGREGGLGATPKTRRWSERLSPHSASALESVWESDAVWPLMQTPLLSWDLTTLLVGGVSMARSWSDKAGVARAVCLARLCQVLLQPELCLRGPGG 342
            GGSSHAGE FRGNESLHLRRLLRVVEHGASLLD N++VDAA    XXXXXXXXXXX          XXXXXXXXXXXXX                  PGDG      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +SFILSPEEA W+RR LELPMQAMGNTQP LKEADKGRLESFRLRQA ALKR R+AARECFEEA AG            GAT KT  WSERLSP SASALESVWESDAVWPLMQ P+LSWDLTTL+VGGVSMARSWS++AGVARAVCLARLCQ LLQPELCLRGPGG
Sbjct: 1719 GGSSHAGEAFRGNESLHLRRLLRVVEHGASLLDHNNNVDAAXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXAGAVSEAQQQLQGAAAVLPGDGDGRDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFILSPEEATWMRRALELPMQAMGNTQPDLKEADKGRLESFRLRQAYALKRPRQAARECFEEAAAG------------GATSKTSSWSERLSPESASALESVWESDAVWPLMQIPILSWDLTTLVVGGVSMARSWSNRAGVARAVCLARLCQALLQPELCLRGPGG 2037          
BLAST of mRNA_E-fasciculatus_F_contig12076.1620.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.940e-7
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query:  285 WPLMQTPLLSWDLTTLLVGGVSMARSWSDKAGVARAVCLARLCQVLLQPELCLRG 339
            WP++Q PLL+WDL+TL     ++  S   +    RAVCLARL Q+ +QPE CL G
Sbjct: 1869 WPVLQVPLLAWDLSTLAAALATLVHSAEQRRAAVRAVCLARLAQLCVQPEFCLLG 1923          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12076.1620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3D4_ECTSI1.040e-8775.29E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5K8R4_9PHAE2.120e-8376.25E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A836CB31_9STRA3.940e-749.09E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12076contigE-fasciculatus_F_contig12076:1291..4089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12076.1620.1mRNA_E-fasciculatus_F_contig12076.1620.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12076 1291..4091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12076.1620.1 ID=prot_E-fasciculatus_F_contig12076.1620.1|Name=mRNA_E-fasciculatus_F_contig12076.1620.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=343bp
GGGGGGSSHAGEVFRGNESLHLRRLLRVVEHGASLLDKNDDVDAAATPAA
AASPAALASEGEAPAAAAAAAAVAAGPVAGGNTGAAGAAEQQLQGAATQV
VPGDGDADASSSSSPTTAGGSGGGAAAAAAVAPVGGVVAAIKLGRIIGGA
AVVPPPEGIRALGGGGGGGGSKGQKASFILSPEEAAWIRRGLELPMQAMG
NTQPSLKEADKGRLESFRLRQACALKRSRRAARECFEEAVAGAGGRLDGR
EGGLGATPKTRRWSERLSPHSASALESVWESDAVWPLMQTPLLSWDLTTL
LVGGVSMARSWSDKAGVARAVCLARLCQVLLQPELCLRGPGGG
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