prot_E-fasciculatus_F_contig12053.1602.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12053.1602.1
Unique Nameprot_E-fasciculatus_F_contig12053.1602.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length107
Homology
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: D8LQU2_ECTSI (Major facilitator superfamily permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU2_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 6.580e-64
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    1 FPLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            FPLLVSVGLCLVNF+MIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK
Sbjct:  438 FPLLVSVGLCLVNFVMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 543          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A6H5J9A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9A0_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 6.680e-64
Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    1 FPLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            FPLLVSVGLCLVNF+MIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK
Sbjct:  439 FPLLVSVGLCLVNFVMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 544          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A7S2UWW0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.150e-27
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLP-DEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            PL V +GLC  N    A ++PE    D  R + +DL +ANP+GAV +  R++L+  + A +   W+AH GLQ+NWIN+TD KFGWG A SGASLA MGLLVA  PK
Sbjct:   13 PLYVGMGLCSFNAAFTATLVPEPRARDNGRRRDLDLARANPVGAVKLLARSKLLVALSASYFCTWVAHSGLQVNWINFTDYKFGWGAATSGASLAFMGLLVAAMPK 118          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A836CIS1_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.430e-25
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    1 FPLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            F + VSV LC +N L+   VMPE+L   +R   VD   ANP+GA+ + +R+ +  G+  C+ L WIA+ GLQIN+ NYT++K  W  AQSG  LALMG+LVAV PK
Sbjct:   99 FSVCVSVALCALNALLTGLVMPESLHRARRKPAVDFTMANPVGALRLLSRSPISLGISICYCLHWIANAGLQINFFNYTEKKLSWTPAQSGGGLALMGILVAVAPK 204          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A7S2CZ70_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZ70_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.710e-19
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLPDEKRV-KKVDLKQANPLGAVTMAT-RNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            PLL+  GL L+N  +IAFV PE+LP  +R  +K+DL++ANP+GA+ +   RN L+TG    + L+++A + L   + +Y   KFGWG AQSG  L L+GL++A+ P+
Sbjct:  239 PLLIGAGLQLLNAFLIAFVTPESLPASERAGRKLDLRKANPIGALKLLLGRNPLLTGSAVAYFLVYLAKLCLDSQFTDYALYKFGWGPAQSGPLLVLVGLMLAIVPR 345          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A7S0TRX5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRX5_HEMAN)

HSP 1 Score: 85.9 bits (211), Expect = 2.330e-17
Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            P + S  +  VN L++ F++PE+ P++ R ++VDL  ANP GA+ M   + L+ GV   + LLW AH GLQ+ W+N+ D + GW  ++SG  L++ G+ V++ PK
Sbjct:  249 PFIASAVIGFVNSLLV-FLIPESNPEDDR-REVDLANANPWGALRMLHEDPLMFGVAVTYFLLWFAHTGLQVTWMNFFDAQHGWPASKSGMVLSVFGIGVSIMPK 351          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A7S2G8W7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8W7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.180e-17
Identity = 43/98 (43.88%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   11 LVNFLMIAFVMPETLPDEKRV-KKVDLKQANPLGAVTMAT-RNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            L+N  +IAFV PE+LP  +R  +K+DL++ANP+GA+ +   RN L+TG    + L+++A + L   + +Y   KFGWG AQSG  L L+GL++A+ P+
Sbjct:    6 LLNAFLIAFVTPESLPASERAGRKLDLRKANPIGALKLLLGRNPLLTGSAVAYFLVYLAKLCLDSQFTDYALYKFGWGPAQSGPLLVLVGLMLAIVPR 103          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A7S0VW17_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VW17_9CRYP)

HSP 1 Score: 81.6 bits (200), Expect = 2.170e-16
Identity = 40/105 (38.10%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAVFPK 106
            P + S  +  VN L+++ + PE+ P++ R ++VDL  ANP GA+ M   N L  G+   + LLW AH GLQ+ W+N+ + + GW  ++SG  L++ G+ ++V PK
Sbjct:   56 PFIASACIGAVNALLVSLI-PESNPEDLR-REVDLANANPWGALKMLHANPLTFGLAVSYFLLWFAHTGLQVTWMNFFETQHGWPASKSGIVLSVFGIGISVMPK 158          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: A0A1E4NI89_9GAMM (Tetracycline resistance MFS efflux pump n=2 Tax=Xanthomonadales TaxID=135614 RepID=A0A1E4NI89_9GAMM)

HSP 1 Score: 81.3 bits (199), Expect = 8.610e-16
Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLLVAV 103
            P  V+ GLCLVNF    FV+PE+LP E+R  K D + ANPLG++ +  R   +  +   + LL +A   +   ++ YTD ++GWG    G +LAL+G+L  V
Sbjct:  173 PFWVAAGLCLVNFCYGWFVLPESLPKERRAPKFDWRHANPLGSLLLLKRYPQVLALAMVFFLLALAQFSINSTYVLYTDFRYGWGPQTVGYTLALVGVLTGV 274          
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Match: I4VIW2_9GAMM (Major facilitator superfamily protein n=4 Tax=Rhodanobacter TaxID=75309 RepID=I4VIW2_9GAMM)

HSP 1 Score: 79.7 bits (195), Expect = 2.980e-15
Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    2 PLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATRNQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGL 99
            P  V+ GL LVNF    FV+PE+LP E+R K+ + + ANPLGAV +  R   + G+ A + L+ +A   L   ++ YTD +FGWG    G +L L+GL
Sbjct:  138 PFWVAAGLSLVNFCYGWFVLPESLPPERRSKRFEWRHANPLGAVMLLRRYPQVFGLAAVFFLINLAQFSLNSTYVLYTDYRFGWGPQVVGYTLGLVGL 235          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12053.1602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQU2_ECTSI6.580e-6499.06Major facilitator superfamily permease n=1 Tax=Ect... [more]
A0A6H5J9A0_9PHAE6.680e-6499.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UWW0_9STRA1.150e-2751.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CIS1_9STRA1.430e-2550.00Major facilitator superfamily domain-containing pr... [more]
A0A7S2CZ70_9STRA2.710e-1944.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0TRX5_HEMAN2.330e-1740.00Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2G8W7_9STRA4.180e-1743.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0VW17_9CRYP2.170e-1638.10Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1E4NI89_9GAMM8.610e-1640.20Tetracycline resistance MFS efflux pump n=2 Tax=Xa... [more]
I4VIW2_9GAMM2.980e-1542.86Major facilitator superfamily protein n=4 Tax=Rhod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 1..105
e-value: 2.9E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 2..103
NoneNo IPR availablePANTHERPTHR23504:SF31MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10coord: 2..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.533
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 3..25
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 2..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12053contigE-fasciculatus_F_contig12053:291..2114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12053.1602.1mRNA_E-fasciculatus_F_contig12053.1602.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12053 291..2114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12053.1602.1 ID=prot_E-fasciculatus_F_contig12053.1602.1|Name=mRNA_E-fasciculatus_F_contig12053.1602.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=107bp
FPLLVSVGLCLVNFLMIAFVMPETLPDEKRVKKVDLKQANPLGAVTMATR
NQLITGVFACWTLLWIAHVGLQINWINYTDRKFGWGVAQSGASLALMGLL
VAVFPKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf