prot_E-fasciculatus_F_contig11743.1379.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI) HSP 1 Score: 429 bits (1103), Expect = 2.220e-142 Identity = 254/307 (82.74%), Postives = 268/307 (87.30%), Query Frame = 0
Query: 1 MLARGLSLTLPLLLVLSPLVLSRVGAQCFVPSASAWLSTTTATTRAMRLAPHTTSTSACQRLLLLLASQPRRRNLLPHIPSISTLRASLHGGTMASTCGATPPMAPAAAPLLPRISSNSGSGSSRRRLRHLAASPTGTSPTNSMARGPTGEPSPRPAVRRAVGSNMKTPPPPTGKEDGDLISTTPSLLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMT-TAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
MLARG SL LPLLLVLSPLVLS VGA CF+P++SA LSTT ATTRAMRLAPHTTSTSACQRLLLLLAS P+RRNLLPHIPS STLRASLHGGT+ ST GATPPMAPAA+PLLPR RRL+HLAASPTGTSPTN +ARGPTGEPSPRPA+RRAVGSNMKT P T KEDGDLISTT S LPS SSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALT+ LSS T AEA+AGGDAG+ +AAPA VNGG AGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPR +
Sbjct: 1 MLARGFSLALPLLLVLSPLVLSHVGAPCFIPASSAGLSTT-ATTRAMRLAPHTTSTSACQRLLLLLASHPKRRNLLPHIPSTSTLRASLHGGTITSTRGATPPMAPAASPLLPRXXXXXXXXXXXRRLQHLAASPTGTSPTNPIARGPTGEPSPRPALRRAVGSNMKTLPR-TNKEDGDLISTTRSPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSF 305
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE) HSP 1 Score: 186 bits (473), Expect = 8.870e-51 Identity = 113/143 (79.02%), Postives = 117/143 (81.82%), Query Frame = 0
Query: 166 MKTPPPPTGKEDGDLISTTPSLLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGE--AGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
MKTPP T KEDGDLI T S LPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALT+ TTLSS T AEA+AG DAG+ AGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPR +
Sbjct: 1 MKTPPR-TNKEDGDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSF 142
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.470e-13 Identity = 50/109 (45.87%), Postives = 56/109 (51.38%), Query Frame = 0
Query: 198 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
DTIFAL++G AG AGVAV+R+SGP + L L A R P ARRA VRRLYDP GDLLDEALVLWMPGPR +
Sbjct: 4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLIT--------------------------------APGRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSF 80
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: UPI00199C6C05 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI00199C6C05) HSP 1 Score: 69.7 bits (169), Expect = 1.560e-11 Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 0
Query: 196 SEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPR 304
S DTI+A+++G AG AG+AVVR+SGP + + + ALT PA+RRAVVR+L DPATGDLLD+A+VLW+PGP+
Sbjct: 3 SSDTIYAVSSG-AGKAGIAVVRVSGPHAGKAMTALTGS--------------------------------------LPASRRAVVRKLGDPATGDLLDQAVVLWLPGPQ 72
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A0G4EE61_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EE61_VITBC) HSP 1 Score: 68.9 bits (167), Expect = 2.480e-9 Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 0
Query: 197 EDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
+DTI+AL++G+ G AGVAV+RISGPLS +LQ LT + T ++ + L P P R+AV+RR+YDP G+LLD+ LV+W P P +
Sbjct: 77 DDTIYALSSGS-GKAGVAVIRISGPLSPLILQLLTTDPS-----------------TRPCSSSSSNAIPYHGLRPLPPPRQAVLRRIYDPLVGELLDQGLVMWFPSPHSF 168
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A258GN67_9PROT (tRNA modification GTPase MnmE n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A258GN67_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 5.120e-9 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 0
Query: 198 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPP---FPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
DTI ALA+G+ G AGVAV+R SGP SA V++ALT A GD+ T + A++ + R P P R+A VR+L+D A G LDEAL+LWMPGP Y
Sbjct: 9 DTIIALASGS-GRAGVAVIRASGPGSAGVIRALTR---------ANQPYPGDSSGPTGSEGALDPADVSRETPQPQSLPQPRKAAVRKLFDEA-GGFLDEALILWMPGPLSY 109
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A6A4X5J5_AMPAM (tRNA modification GTPase GTPBP3, mitochondrial n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X5J5_AMPAM) HSP 1 Score: 67.4 bits (163), Expect = 7.030e-9 Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0
Query: 199 TIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
T+FAL++G+ G GVAV+R++GP SA L+ALT G +L PAARRAVVRRL+ P G LLD AL+LW+PGP +
Sbjct: 25 TVFALSSGH-GRCGVAVIRVTGPASADALRALTGGRSL------------------------------------PAARRAVVRRLFSPCDGALLDRALLLWLPGPASF 95
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: UPI00056EA609 (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Thermopetrobacter sp. TC1 TaxID=1495045 RepID=UPI00056EA609) HSP 1 Score: 65.5 bits (158), Expect = 2.910e-8 Identity = 45/109 (41.28%), Postives = 57/109 (52.29%), Query Frame = 0
Query: 198 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
DTIFAL+TG G A +AV+RISGP + VL++LT GR LP AR+AVVR + DP TG+++DEALVLW PGP +
Sbjct: 8 DTIFALSTGQ-GAAAIAVIRISGPRAGDVLRSLT----------------------------------GRNLPE---ARKAVVRSIRDPETGEVVDEALVLWFPGPGSF 78
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: A0A7W6IDK9_9HYPH (tRNA modification GTPase MnmE n=1 Tax=Microvirga flocculans TaxID=217168 RepID=A0A7W6IDK9_9HYPH) HSP 1 Score: 65.1 bits (157), Expect = 3.690e-8 Identity = 49/111 (44.14%), Postives = 59/111 (53.15%), Query Frame = 0
Query: 196 SEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
S+DTIFA+A+G G A V ++RISGP S VL+ + GGD LPP RRAVVR L DPATG+ LD+ALVLWMPGPR +
Sbjct: 3 SDDTIFAMASGQ-GRAAVCLIRISGPGSRGVLERM----------------GGD-------------------LPP---PRRAVVRTLRDPATGEPLDQALVLWMPGPRSF 74
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Match: UPI001378B2FE (tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE n=1 Tax=Microvirga arsenatis TaxID=2692265 RepID=UPI001378B2FE) HSP 1 Score: 65.1 bits (157), Expect = 3.690e-8 Identity = 44/111 (39.64%), Postives = 56/111 (50.45%), Query Frame = 0
Query: 196 SEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTAGTTLSSGTVAEAAAGGDAGMTTAAPAAVNGGEAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRRY 306
S+DTIFA+A+G+ G A V ++RISGP S +L+ + G P RRAVVR L DPATG+ LD+ALVLWMPGPR +
Sbjct: 3 SDDTIFAIASGH-GRAAVCLIRISGPGSGLILERMAGG--------------------------------------VPEPRRAVVRTLVDPATGEPLDQALVLWMPGPRSF 74 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11743.1379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-fasciculatus_F_contig11743.1379.1 ID=prot_E-fasciculatus_F_contig11743.1379.1|Name=mRNA_E-fasciculatus_F_contig11743.1379.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=306bpback to top |