prot_E-fasciculatus_F_contig11383.1111.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig11383.1111.1
Unique Nameprot_E-fasciculatus_F_contig11383.1111.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length44
Homology
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 7.080e-20
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKR+
Sbjct:   10 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRT 53          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 8.360e-20
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKR+
Sbjct:  371 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRT 414          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: F0YJY9_AURAN (PRP1_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY9_AURAN)

HSP 1 Score: 72.4 bits (176), Expect = 1.040e-13
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VVIDREQW+KEAE AE A APLTCGAIVR T+ IGVE EDRKR+
Sbjct:  511 VVIDREQWLKEAEAAELAAAPLTCGAIVRHTIGIGVENEDRKRT 554          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.420e-13
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            V+ DRE W+KEAE AE A AP+TCGAIVRAT+H+GVE EDRKR+
Sbjct:  361 VINDREAWLKEAEAAESAGAPITCGAIVRATIHMGVEAEDRKRT 404          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A1V9ZC51_9STRA (Pre-mRNA-processing factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC51_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.610e-13
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            +VIDR+ W+KEAE  EQA+APLTC A+VR T++IGVEEEDRKR+
Sbjct:  657 IVIDRDTWLKEAEACEQAEAPLTCAALVRQTLNIGVEEEDRKRT 700          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 70.1 bits (170), Expect = 6.750e-13
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKR 43
            V IDREQW+KEAEEAE+  APLTCGA+VRA + +GVE EDRKR
Sbjct:  273 VEIDREQWLKEAEEAERGGAPLTCGAVVRAALPLGVEPEDRKR 315          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A8J2SWX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWX2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.210e-13
Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VVIDRE W+KEAE AEQA APLTC A+VR T+ +GVE EDRKR+
Sbjct:  557 VVIDREAWLKEAESAEQAQAPLTCAAVVRHTIGLGVEVEDRKRT 600          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: H3GKT1_PHYRM (PRP1_N domain-containing protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GKT1_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 1.720e-12
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VV++RE W+KEAE  EQADAPLTC AIVRA++ +GVE EDRKR+
Sbjct:  512 VVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVEPEDRKRT 555          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 68.2 bits (165), Expect = 3.210e-12
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VVI+RE W+KEAE  E ADAPLTC AIVRA + +GVE EDRKR+
Sbjct:  525 VVINREMWLKEAEACEHADAPLTCAAIVRACIDVGVEPEDRKRT 568          
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Match: A0A3M6VD23_9STRA (PRP1_N domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VD23_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.000e-12
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS 44
            VV++RE W+KEAE  EQADAPLTC AIVRA++ +GV+ EDRKR+
Sbjct:  517 VVMNREMWLKEAEACEQADAPLTCAAIVRASLDVGVDYEDRKRT 560          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig11383.1111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH2_9PHAE7.080e-2097.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI8.360e-2097.73PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
F0YJY9_AURAN1.040e-1379.55PRP1_N domain-containing protein n=1 Tax=Aureococc... [more]
A0A835YM25_9STRA1.420e-1372.73PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A1V9ZC51_9STRA3.610e-1370.45Pre-mRNA-processing factor n=1 Tax=Thraustotheca c... [more]
A0A7S3XY73_HETAK6.750e-1374.42Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2SWX2_9STRA9.210e-1372.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
H3GKT1_PHYRM1.720e-1270.45PRP1_N domain-containing protein n=24 Tax=Peronosp... [more]
K3WCC0_GLOUD3.210e-1270.45PRP1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A3M6VD23_9STRA6.000e-1268.18PRP1_N domain-containing protein n=7 Tax=Peronospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..43
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig11383contigE-fasciculatus_F_contig11383:4230..4361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig11383.1111.1mRNA_E-fasciculatus_F_contig11383.1111.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig11383 4230..4361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig11383.1111.1 ID=prot_E-fasciculatus_F_contig11383.1111.1|Name=mRNA_E-fasciculatus_F_contig11383.1111.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=44bp
VVIDREQWIKEAEEAEQADAPLTCGAIVRATVHIGVEEEDRKRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027108Prp6/Prp1/STA1