prot_E-fasciculatus_F_contig10496.397.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10496.397.1
Unique Nameprot_E-fasciculatus_F_contig10496.397.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length102
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10496.397.1 vs. uniprot
Match: D8LRZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ0_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.190e-58
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 AFECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATAAELPSPSSLSKCVQVLEESRELFPENPEVLFFFAEV 102
            AFECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATAAELPSPSSLSKCVQVLEESRELFPENPEVLFFFAEV
Sbjct:  692 AFECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATAAELPSPSSLSKCVQVLEESRELFPENPEVLFFFAEV 793
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BLAST of mRNA_E-fasciculatus_F_contig10496.397.1 vs. uniprot
Match: A0A835YUV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV6_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.620e-6
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0 
Query:    1 AFECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMPISRAAWGVALFKLATA 66
            A E F  A    P D+D++LHRGQ HLL N+ + A+ DL+R+        +++A++G++LFK A A
Sbjct:  802 ALEWFRLALEADPSDADVYLHRGQYHLLTNNPKAASFDLQRAAGFAEAPAVAQASYGISLFKRAAA 867
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10496.397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRZ0_ECTSI1.190e-58100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV6_9STRA2.620e-640.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..102
e-value: 3.4E-15
score: 57.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..101
NoneNo IPR availablePANTHERPTHR46208FAMILY NOT NAMEDcoord: 1..102
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..49
score: 11.854

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10496contigE-fasciculatus_F_contig10496:105..1652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10496.397.1mRNA_E-fasciculatus_F_contig10496.397.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10496 105..1652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10496.397.1 ID=prot_E-fasciculatus_F_contig10496.397.1|Name=mRNA_E-fasciculatus_F_contig10496.397.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=102bp
AFECFDAAAAIAPRDSDLFLHRGQGHLLANDFRKATADLRRSVELCPTMP
ISRAAWGVALFKLATAAELPSPSSLSKCVQVLEESRELFPENPEVLFFFA
EV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf