prot_E-fasciculatus_F_contig10490.391.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10490.391.1
Unique Nameprot_E-fasciculatus_F_contig10490.391.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length151
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10490.391.1 vs. uniprot
Match: D8LN70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN70_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 4.920e-33
Identity = 107/151 (70.86%), Postives = 108/151 (71.52%), Query Frame = 0 
Query:    1 GRLRDGGASSSSSASVAMMMGSLSIGGDQSAADQRYGGRGDLGRGXXXXXGQPEDGVVFADDYDLVGPPDGXXXXXFGFLDTPXXSNYEPRHDDRAPLQXXXXXXXXXXXXXXXXXPPTPLLPRRGVGGSPSLAPQRRRLPHDVGGFPASG 151
            GRL   GASS   ASVAMMMGSLSI GDQSAA QRYG   +LGRG     GQPEDGV FADDYDLVGPPDGXXXXX  FLD  XX              XXXXXXXXXXXXX    P TPL PRRGVGGSPSL PQ RRLPHDVGGFPASG
Sbjct:  505 GRLGGQGASSXXXASVAMMMGSLSIAGDQSAAGQRYGAGNELGRGGGGG-GQPEDGVNFADDYDLVGPPDGXXXXXXXFLDXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXQSTAPRTPLHPRRGVGGSPSLTPQPRRLPHDVGGFPASG 653
[Close]
BLAST of mRNA_E-fasciculatus_F_contig10490.391.1 vs. uniprot
Match: A0A6H5KNA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA0_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.890e-20
Identity = 63/78 (80.77%), Postives = 64/78 (82.05%), Query Frame = 0 
Query:   77 FGFLDTPXXSNYEPRHDDRAPLQXXXXXXXXXXXXXXXXX---PPTPLLPRRGVGGSPSLAPQRRRLPHDVGGFPASG 151
            FGFLDTP  SNYEP HDDRAPLQ    XXXXXXXXXXXXX   P  P+LPRRGVGGSPSL PQRRRLPHDVGGFP SG
Sbjct:  583 FGFLDTPPPSNYEPGHDDRAPLQQQQHXXXXXXXXXXXXXXXAPLAPILPRRGVGGSPSLTPQRRRLPHDVGGFPVSG 660
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10490.391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN70_ECTSI4.920e-3370.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNA0_9PHAE2.890e-2080.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10490contigE-fasciculatus_F_contig10490:1385..1837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10490.391.1mRNA_E-fasciculatus_F_contig10490.391.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10490 1385..1838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10490.391.1 ID=prot_E-fasciculatus_F_contig10490.391.1|Name=mRNA_E-fasciculatus_F_contig10490.391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=151bp
GRLRDGGASSSSSASVAMMMGSLSIGGDQSAADQRYGGRGDLGRGGRGGR
GQPEDGVVFADDYDLVGPPDGGGGGSFGFLDTPPPSNYEPRHDDRAPLQP
QQQPQQQEEERQQSTAPPTPLLPRRGVGGSPSLAPQRRRLPHDVGGFPAS
G
back to top