prot_E-fasciculatus_F_contig101.111.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig101.111.1
Unique Nameprot_E-fasciculatus_F_contig101.111.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length244
Homology
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BLAST of mRNA_E-fasciculatus_F_contig101.111.1 vs. uniprot
Match: D7FLK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK8_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.150e-9
Identity = 44/121 (36.36%), Postives = 62/121 (51.24%), Query Frame = 0 
Query:  132 SYSSSFFPLLSVVAVL------WTGYLMHYLRRLGVIEDI--RTFGEP--CRTKTFYLHAWKYLLAGSLLYATLLYVSPAPTAWRWALIVTHSLRAVKVLVSLRGQSCNAVEEGGGVADDV 242
            S+ S  F +  V  V+      WT  L H L R  +   I  R F     C T+    H   +LLAG ++YA LL++SPAP+ W W+LIVTHS R + +L++LRG +       G +   V
Sbjct:  241 SHLSLVFSVFQVAVVIVIYFSCWTICLTHLLYRPFIKTAIYGRFFQWELICMTQPRCRHVRAFLLAGGMIYAVLLHLSPAPSKWTWSLIVTHSTRLLSLLIALRGDNEGVANAAGEIVAHV 361
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig101.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLK8_ECTSI2.150e-936.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 199..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 157..176
NoneNo IPR availableTMHMMTMhelixcoord: 137..156
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 177..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig101contigE-fasciculatus_F_contig101:28613..29344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig101.111.1mRNA_E-fasciculatus_F_contig101.111.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig101 27988..29670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig101.111.1 ID=prot_E-fasciculatus_F_contig101.111.1|Name=mRNA_E-fasciculatus_F_contig101.111.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=244bp
MRKAVDLSDWDIILPLVVACTACAIWTGASHSLCTLRVQGAVDKIRSTND
EESDRRLGRGRPAEPLDVDDGVHVDVFEYHDITTMSLHFLRAGLVWALVQ
LFVIALCVVLIPWYLFLGQSTCQSWSWFSCQSYSSSFFPLLSVVAVLWTG
YLMHYLRRLGVIEDIRTFGEPCRTKTFYLHAWKYLLAGSLLYATLLYVSP
APTAWRWALIVTHSLRAVKVLVSLRGQSCNAVEEGGGVADDVL*
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