prot_E-fasciculatus_F_contig101.108.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig101.108.1
Unique Nameprot_E-fasciculatus_F_contig101.108.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length835
Homology
BLAST of mRNA_E-fasciculatus_F_contig101.108.1 vs. uniprot
Match: D8LF17_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF17_ECTSI)

HSP 1 Score: 1176 bits (3043), Expect = 0.000e+0
Identity = 712/864 (82.41%), Postives = 738/864 (85.42%), Query Frame = 0
Query:    1 MKERLLFHLRLGDSSSPLARRKSLVAIGSXXXXXXXXXXXXXXXXXXXXXXXXXXPPHLVCTCLHSSESSAVAVGFERGVVHVYYRQHEDRIRRSSEEERWKRSVIYPTRALGSGVASPIESPAAAAAVPPDITCVAIAPGGGKLAVGTSDGFVFVTQAPPPPTGDSPGTGWARGSGFHHKSHRGKRINCLLWDKSGDQLYSVCEGGTVVLARNLRPRRGGPAAGVPGITGVMQFLGVHQPDDSSKADTPASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFVACDVLLVMTRKRAVLFYFAVGEDVSVVAPQKISVDLNVIDDTTTDTGRXXXXXXXXXXXXXXXXXSRTDFGACLWGPAQMPGVGGSXXXXXXXXXXXXXXXXXXPGRNSGGRRRTPERRESYEVLPAAAA---APRAVLFAYVAQPGGRLWRVGLSDGEVESMHRPLGIDEGGVGLPVESGVELGEMWAVDVGEARALLCWRSGFSSKKGGEFALLDPNTHSFVAACPGMSGTVDVSGFVLSPFSKSEGGGSLQSIRQRLEVLGGGVRVLHGGDLAKVTMLYHNAEGEAWSISSSEAIEGWGAALSAEAAARTVQRAWRATREGRSMAADTAA-----AEGGDTPPTATRDPPLQLLMPGDFPLRGRGAA---AAPPSSLPSLRDVAAGDPNPSAAA-----------------RGHRYRQDRDDSDGRVPESLRSGNGGLRGGGSSSRSSRRGARSRSKNFSVRDSIEALDAADRALQLSSHSRQASSPMSGDRGEDSYWPTDDSXXXXXXXXXXXXXXX--GTPSGSESDGGANAMCRATDALIRQTWPVLHRTGSLENLALPPDSPPFRSAPASFP 834
            MKER LFHLRLGDSS+PLARRKSL  + +XXXXXXXXXXXXXXXXXXXXXXX   PPHLV TCLHSS SSAVAVGFERGVVHVYYRQHEDR+RRSSEEERWKR+VIYPTRALGSGVASPIESPAAAA VPPDITCVAIAPGGGKLAVGTSDGFVFVTQAPPPPTG SPGTGWARGSGFHHKSHRGKRINCLLW  SGDQLYSVCEGGTVVLARNLRPRRG PAAG  GITGVMQFLGVHQPDDS+KADTPASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGF+ACDVLLVMTRK+AVLFYFAVGEDVS+VAP K SVDLNV+D TT DTG+     XXXXXXXXXXX SRTDFG CLWGPAQMPGVGG XXXXXXXXXXXXXX     GR+S G R TPERRES E LPAAAA   APRAVLFAYVAQPGGRLWRVGLSDGEVES HRPLG+DEGG GLPVESGVELGEMWAVDVG+ARALLCWRSGF+SKKGGEFALLDPNTHSFVAACPGMSGTVDVSGFVLSP  +S GGGSLQSIRQRLEVLGGGVRVLHGGDLAKVTMLYHNAEGEAWS SSSEAIEGWGAALSAEAAARTVQRAWRATR+G               EGGDTPPTATRDPPLQLLMPGDFPLRGRGAA   AAPPSSLPS+RDVAAG P+ SAAA                 RGHR R+DRDDS G VPESL SGNG L G GSS R  RRGARS SKNFSVRDSIEALDAADRALQLSSH+RQASSP SGDRGED+YWPTD+S             XX  GTPSGSESDGGANAMCR + AL+R  WPVL    SL   +LPP SPP R APA FP
Sbjct:    1 MKERPLFHLRLGDSSTPLARRKSL--LDTXXXXXXXXXXXXXXXXXXXXXXXDERPPHLVSTCLHSSVSSAVAVGFERGVVHVYYRQHEDRVRRSSEEERWKRTVIYPTRALGSGVASPIESPAAAA-VPPDITCVAIAPGGGKLAVGTSDGFVFVTQAPPPPTGGSPGTGWARGSGFHHKSHRGKRINCLLWANSGDQLYSVCEGGTVVLARNLRPRRGAPAAGPAGITGVMQFLGVHQPDDSTKADTPASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFLACDVLLVMTRKQAVLFYFAVGEDVSIVAPHKTSVDLNVVDHTTADTGQPSGGNXXXXXXXXXXX-SRTDFGGCLWGPAQMPGVGGXXXXXXXXXXXXXXXAR---GRSSAGMR-TPERRESCEALPAAAAVAAAPRAVLFAYVAQPGGRLWRVGLSDGEVESTHRPLGVDEGGDGLPVESGVELGEMWAVDVGDARALLCWRSGFTSKKGGEFALLDPNTHSFVAACPGMSGTVDVSGFVLSPLPQSAGGGSLQSIRQRLEVLGGGVRVLHGGDLAKVTMLYHNAEGEAWSTSSSEAIEGWGAALSAEAAARTVQRAWRATRKGXXXXXXXXXXXXXXVEGGDTPPTATRDPPLQLLMPGDFPLRGRGAAVSAAAPPSSLPSVRDVAAGYPDSSAAAGLQLRDQAETAPAAAAARGHRNREDRDDSGGWVPESLPSGNGDL-GSGSSRR--RRGARSGSKNFSVRDSIEALDAADRALQLSSHARQASSPTSGDRGEDTYWPTDESSSRSRRTDGGGVGXXSSGTPSGSESDGGANAMCRGSVALLRAAWPVLPCPLSLVRFSLPPGSPPVRGAPACFP 853          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig101.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF17_ECTSI0.000e+082.41Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 35..263
e-value: 4.2E-9
score: 37.6
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 60..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig101contigE-fasciculatus_F_contig101:3663..9413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig101.108.1mRNA_E-fasciculatus_F_contig101.108.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig101 3663..9413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig101.108.1 ID=prot_E-fasciculatus_F_contig101.108.1|Name=mRNA_E-fasciculatus_F_contig101.108.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=835bp
MKERLLFHLRLGDSSSPLARRKSLVAIGSSGGPPPGRGGTTTTTTPPSAE
TEEERPPHLVCTCLHSSESSAVAVGFERGVVHVYYRQHEDRIRRSSEEER
WKRSVIYPTRALGSGVASPIESPAAAAAVPPDITCVAIAPGGGKLAVGTS
DGFVFVTQAPPPPTGDSPGTGWARGSGFHHKSHRGKRINCLLWDKSGDQL
YSVCEGGTVVLARNLRPRRGGPAAGVPGITGVMQFLGVHQPDDSSKADTP
ASPQAIVVGHTGSPGVSLDLGRTRASLPGATKGFVACDVLLVMTRKRAVL
FYFAVGEDVSVVAPQKISVDLNVIDDTTTDTGRRPHGGNNSGTPPPPPPP
SRTDFGACLWGPAQMPGVGGSSSSSSSSSTSTSAGASGAPGRNSGGRRRT
PERRESYEVLPAAAAAPRAVLFAYVAQPGGRLWRVGLSDGEVESMHRPLG
IDEGGVGLPVESGVELGEMWAVDVGEARALLCWRSGFSSKKGGEFALLDP
NTHSFVAACPGMSGTVDVSGFVLSPFSKSEGGGSLQSIRQRLEVLGGGVR
VLHGGDLAKVTMLYHNAEGEAWSISSSEAIEGWGAALSAEAAARTVQRAW
RATREGRSMAADTAAAEGGDTPPTATRDPPLQLLMPGDFPLRGRGAAAAP
PSSLPSLRDVAAGDPNPSAAARGHRYRQDRDDSDGRVPESLRSGNGGLRG
GGSSSRSSRRGARSRSKNFSVRDSIEALDAADRALQLSSHSRQASSPMSG
DRGEDSYWPTDDSSSRSRRTGGGGGGSSGTPSGSESDGGANAMCRATDAL
IRQTWPVLHRTGSLENLALPPDSPPFRSAPASFPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf