mRNA_E-fasciculatus_F_contig16506.4394.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.830e-67 Identity = 102/107 (95.33%), Postives = 105/107 (98.13%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSERITLLTTFDGKTGKIPFQDTKVRE 321
RHCPFGHLEVNPEWR AGSVPKTVMLAQHRKQRKSKLTVGEGWKAF+DDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSERITLLTTFDGKTGKIPFQDTK+ +
Sbjct: 59 RHCPFGHLEVNPEWRLAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFTDDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSERITLLTTFDGKTGKIPFQDTKITD 165
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.260e-16 Identity = 47/108 (43.52%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1 RHCPFGHLEV-NPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRALQKRKREERGSERITLLTTFDGKTGKIPFQDTKVRE 321
RHCPF H V +P R G KTV+L S GGG VLFWSGGKDSFLTLRALQ +R++ G+ + L+TT D +G + FQ+T +R+
Sbjct: 51 RHCPFLHQNVEDPALRKNGPT-KTVLLNDGSDASXXXXXXXXXXXXXSARGGGPLNVLFWSGGKDSFLTLRALQAEQRDDPGAPEVMLITTCDAVSGTVAFQNTNIRD 157
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: V9F9V3_PHYPR (Diphthine--ammonia ligase n=10 Tax=Phytophthora TaxID=4783 RepID=V9F9V3_PHYPR) HSP 1 Score: 68.6 bits (166), Expect = 3.030e-11 Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRK-------SKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRALQKR-KREERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ TV L R+ R ++ EG+ +G E V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P Q+
Sbjct: 430 RHCPYGHANVKDPSRRKNTLTGTVYLQPRRRSRGFAKDSPGGQMLWPEGFNV--SEGPSELVVVFWSGGKDSFLALSALYETYAAEQKPMPRVVLLTTIDPKTNVVPIQN 537
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: G5ADK1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ADK1_PHYSP) HSP 1 Score: 68.6 bits (166), Expect = 3.180e-11 Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRK-------SKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRAL-QKRKREERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ V L R+ R ++ EG A SD + V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P QD
Sbjct: 414 RHCPYGHANVKDPSRRKNTLAGNVFLQPRRRSRGFAKGSPGGQMLWPEGADAGSD-AQNDLVVMFWSGGKDSFLALGALYESYAAEQKAMPRVVLLTTIDPKTNVVPIQD 522
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: A0A329RGY9_9STRA (Diphthine--ammonia ligase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RGY9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 4.120e-11 Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSD-----DGGGERTVLFWSGGKDSFLTLRALQKR-KREERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ TV L R+ R G + + +G E +V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P Q+
Sbjct: 403 RHCPYGHANVKDPSRRTNTLAGTVFLQPRRRSRGFPKDSPGGQMLWPEGCSVSEGLNELSVVFWSGGKDSFLALSALYETYAAEQKPMPRVVLLTTIDPKTNVVPIQN 510
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: G5AIV4_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIV4_PHYSP) HSP 1 Score: 67.4 bits (163), Expect = 6.180e-11 Identity = 41/109 (37.61%), Postives = 54/109 (49.54%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSD------DGGGERTVLFWSGGKDSFLTLRALQKRKR-EERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ V L R+ R G K + + D + V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P QD
Sbjct: 150 RHCPYGHANVKDPSRRKNALAGNVFLQPRRRSRGFAKGSPGGQKLWPEGADAGSDAQNDLVVMFWSGGKDSFLALGALYESYAVEQKPMPRVVLLTTIDPKTNVVPIQD 258
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: G5AIH5_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIH5_PHYSP) HSP 1 Score: 67.0 bits (162), Expect = 9.340e-11 Identity = 40/109 (36.70%), Postives = 54/109 (49.54%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSD------DGGGERTVLFWSGGKDSFLTLRALQKRKR-EERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ + L R+ R G K + + D + V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P QD
Sbjct: 252 RHCPYGHANVKDPSRRKNTLAGNIFLQPRRRSRGFAKGSPGGQKLWPEGADAGSDAQNDLVVMFWSGGKDSFLALGALYESYAVEQKPMPRVVLLTTIDPKTNVVPIQD 360
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: H3H427_PHYRM (Diphthine--ammonia ligase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H427_PHYRM) HSP 1 Score: 67.0 bits (162), Expect = 1.050e-10 Identity = 41/110 (37.27%), Postives = 55/110 (50.00%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRK-------SKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRALQKR-KREERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R ++ V L R+ R +L EG A D + V+FWSGGKDSFL L AL + E++ R+ LLTT D +T +P Q+
Sbjct: 404 RHCPYGHANVKDPARRKNTLAGNVFLQPRRRSRGVAKDAPGGRLLWPEGAAAAVADSPNDLVVVFWSGGKDSFLALSALYETYAAEQKPMPRVVLLTTIDPETNVVPIQN 513
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: A0A6A3TC48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TC48_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.430e-10 Identity = 42/110 (38.18%), Postives = 56/110 (50.91%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRK-------SKLTVGEGWKAFSDDGGGERTVLFWSGGKDSFLTLRAL-QKRKREERGSERITLLTTFDGKTGKIPFQD 306
RHCP+GH V R + V L R+ R ++ EG +A SD + V+FWSGGKDSFL L AL + E++ R+ LLTT D KT +P Q+
Sbjct: 401 RHCPYGHANVKDPSRRKNKLAGNVFLRPRRRSRGFMKDSPGGQMLWPEGAEAGSD-AQNDLVVMFWSGGKDSFLALSALYESYAAEQKPMPRVVLLTTIDPKTNVVPIQN 509
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Match: K3WTG3_GLOUD (Diphthine--ammonia ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTG3_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 3.640e-10 Identity = 47/118 (39.83%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 1 RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEG-----WK---AFSDDGGGER--TVLFWSGGKDSFLTLRALQKR--KREERGSERITLLTTFDGKTGKIPFQDTKVR 318
RHCP+GH V R V + V L K R++K G W A S + GER VLFWSGGKDSFL+L L REE+ ++ LLTT D T +P Q V+
Sbjct: 418 RHCPYGHANVKDASRRKNVVVQDVFLKPRGKARRAKSHGGAPGGSIVWPPGFAESSENQGERDLVVLFWSGGKDSFLSLSHLYASYAAREEKRMPQVVLLTTIDPGTNAVPVQRIDVQ 535 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16506.4394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16506.4394.1 >prot_E-fasciculatus_F_contig16506.4394.1 ID=prot_E-fasciculatus_F_contig16506.4394.1|Name=mRNA_E-fasciculatus_F_contig16506.4394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=107bp RHCPFGHLEVNPEWRPAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFSDDGback to top mRNA from alignment at E-fasciculatus_F_contig16506:1171..2597+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16506.4394.1 ID=mRNA_E-fasciculatus_F_contig16506.4394.1|Name=mRNA_E-fasciculatus_F_contig16506.4394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1427bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16506:1171..2597+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16506:1171..2597+ >mRNA_E-fasciculatus_F_contig16506.4394.1 ID=mRNA_E-fasciculatus_F_contig16506.4394.1|Name=mRNA_E-fasciculatus_F_contig16506.4394.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=642bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16506:1171..2597+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |