mRNA_E-fasciculatus_F_contig16500.4391.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16500.4391.1
Unique NamemRNA_E-fasciculatus_F_contig16500.4391.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 1.900e-144
Identity = 224/227 (98.68%), Postives = 226/227 (99.56%), Query Frame = 1
Query:    1 SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
            SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPT+SSPYPEKLFAKEAFLKSCG+LPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHR VS
Sbjct:  612 SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTSSSPYPEKLFAKEAFLKSCGYLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVS 838          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 9.110e-40
Identity = 82/143 (57.34%), Postives = 105/143 (73.43%), Query Frame = 1
Query:  124 SMLDPANHTNAPD--GFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPS 546
            S+ D  N+++A D  GF+  EIRAAFLRFFVSIFR Y  ++V+PT   P+P++LF +EAFLK    +P  +  FM+ FL SQMFERFLEE+ ++P QPE+RFF+ESI  KLNR K   IKKDTPFLN+  D H QVF+PP P+
Sbjct:  959 SLTDARNNSDAADVLGFNVHEIRAAFLRFFVSIFRTYQDYLVVPTPQDPFPKELFDREAFLKE---MPAQAQEFMSVFLQSQMFERFLEEQLSHPDQPEIRFFEESIVQKLNRGKK-IIKKDTPFLNNLGDDHTQVFSPPHPN 1097          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S2A7N5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7N5_TRICV)

HSP 1 Score: 143 bits (361), Expect = 1.090e-35
Identity = 88/180 (48.89%), Postives = 111/180 (61.67%), Query Frame = 1
Query:  106 GSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIK----KDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
            G  ES  +LD  + T   DGFSA+E R AFLRFFVS+ + Y     +P  S       F  E F+K       +   +M+  + SQMFERF+EER ++P QPEV FFDESI AK NRS+   +K    K TPFL+DQS A    F PPAPSNWGLPDDG  Y Y +SFP+L+++ +G VR
Sbjct:   33 GFGESVHLLDIGDET---DGFSATETRNAFLRFFVSLLQNY--EKFLPDGSMGE----FQHEEFVKDFTS-DGNCRVWMSKVVSSQMFERFIEERISDPDQPEVLFFDESIIAKNNRSRLRTVKGKGKKTTPFLSDQSGAVTDTFTPPAPSNWGLPDDGRTYHY-VSFPKLDRNLFGKVR 201          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: B7FQ36_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ36_PHATC)

HSP 1 Score: 142 bits (357), Expect = 4.300e-35
Identity = 83/179 (46.37%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  121 TSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPI--------KKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
            T +LD  +    P GF +SEIR AFLR FVSIF+ Y  ++          +  F  EAF+ S  +  E S  F++  + +Q F RFL+ER  NP+ PE+RFFDESI AK+NRSK            K++T FL D S+  N+ F PP PSNWGLPDDG  Y YG SFP LN + +G VR
Sbjct:  764 TKLLDKDD----PSGFDSSEIRNAFLRLFVSIFQSYRHYL---------DKNGFRSEAFIDSL-NCSERSSEFLHCVVKTQFFSRFLDERIQNPSDPEIRFFDESIIAKINRSKKQTFSKIGRGGGKRETSFLKDDSNMVNETFTPPPPSNWGLPDDGRTYHYG-SFPALNPELFGKVR 927          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S1YZ68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ68_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.620e-35
Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query:  112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
            +E++   +P N  N   GFS SEIR A LRFF SIF+ Y   +V            F +EAFL     L  +S  F++    SQMFERF+EER  +P QPE+R FDE+I AK NRSK T   KK+TPFL+DQS      F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K
Sbjct:  771 KEASPRENPLN-MNELAGFSTSEIRYATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 939          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S4R4H9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H9_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.910e-35
Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query:  112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
            +E++   +P N  N   GFS SEIR A LRFF SIF+ Y   +V            F +EAFL     L  +S  F++    SQMFERF+EER  +P QPE+R FDE+I AK NRSK T   KK+TPFL+DQS      F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K
Sbjct:  901 KEASPRENPLN-MNELAGFSTSEIRNATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 1069          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S4R4H5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H5_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.950e-35
Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query:  112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
            +E++   +P N  N   GFS SEIR A LRFF SIF+ Y   +V            F +EAFL     L  +S  F++    SQMFERF+EER  +P QPE+R FDE+I AK NRSK T   KK+TPFL+DQS      F PP PSNWGLPDDG  Y YG+ FP+L+   +G +R+ K
Sbjct: 1168 KEASPRENPLN-MNELAGFSTSEIRNATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 1336          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A1V9Z028_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z028_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.770e-31
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 1
Query:  100 RFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKK-DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
            R  S+   S  D +   NA   FS  +IR AFLRFFVS+ + Y  ++   T++    + +F   +FL+    +   S  F++  ++SQMF+RF E+R  NPT  EV FFD++I  KLNRS T   KK D  FL D+SD   + F  P PS  GLPD+G+ Y Y  SFPRL K  +GT+R  + L+ T +Q R V+
Sbjct:  589 RSASEYEQSSNDSSFSVNA---FSQEDIRLAFLRFFVSLLKKYATYLNCATSTQTPTQPIFDANSFLRDNSDM--FSRPFLSIMIESQMFQRFCEDRLYNPTLNEVVFFDQAINQKLNRSLTIGKKKLDVSFLEDKSDVIRETFVAPTPSTLGLPDNGTLYHY-KSFPRLKKCLFGTIRKPRELYATREQQRYVA 777          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S2Y961_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y961_9STRA)

HSP 1 Score: 129 bits (325), Expect = 8.090e-31
Identity = 82/181 (45.30%), Postives = 101/181 (55.80%), Query Frame = 1
Query:  115 ESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNR-SKTNPIKK-------DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
            +ST +LD       P GFS  EIR AFL+FFV I + Y  ++   T       K F  E FL S     E S A++   +++Q+FERF++ER   PT  EV FFD SI AK N+  KT P KK       DT FL+D+S    + F PP PSN GLPDDG  Y YG SFP L+   YG VR
Sbjct:  573 QSTYLLD----VKEPSGFSVDEIRTAFLKFFVGILKNYREYINEET-------KTFDSEMFLASKTTYSERSQAYLKGVMETQLFERFMQERIECPTDSEVMFFDTSIDAKQNKFQKTAPFKKFRPGGKKDTSFLDDKSKVVTEKFTPPPPSNSGLPDDGRTYHYG-SFPDLDLSLYGKVR 741          
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A1V9Z8X3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8X3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.370e-29
Identity = 80/201 (39.80%), Postives = 112/201 (55.72%), Query Frame = 1
Query:   94 AVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFL----DSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKK-DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
            +V     E+ S     +   AP  F+  ++R AFLRFFVS+ + Y A+  + TNSS     +        +  +L ++S A    FL    +SQMF+RF E+R  NP+ PEV FFD++I  KLNRS +   KK D  FL D SDA  + F  P PS  GLPD+G+ Y Y  +FPRL K  +GT+R  + L+   +Q R V+
Sbjct:  599 SVSMSGLEAVSSTSSLSSAAAPGVFAQDDVRMAFLRFFVSVLKRYAAY--LNTNSS-----MTNTAPIFDAASYLRDNSDALSRPFLATMTESQMFQRFCEDRLFNPSLPEVVFFDQAINQKLNRSLSLGKKKHDVSFLEDMSDAIRETFVAPTPSTLGLPDNGAVYQY-KAFPRLKKHLFGTIRKPRELYAAREQQRFVA 791          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU92_ECTSI1.900e-14498.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CKZ6_9STRA9.110e-4057.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2A7N5_TRICV1.090e-3548.89Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7FQ36_PHATC4.300e-3546.37Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1YZ68_9STRA5.620e-3548.31Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4R4H9_9STRA5.910e-3548.31Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4R4H5_9STRA5.950e-3548.31Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1V9Z028_9STRA7.770e-3141.54Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2Y961_9STRA8.090e-3145.30Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1V9Z8X3_9STRA2.370e-2939.80Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16500contigE-fasciculatus_F_contig16500:53..2533 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.3
Seed ortholog evalue5.4e-121
Seed eggNOG ortholog2880.D8LU92
KEGG koko:K12486,ko:K20164
KEGG Pathwayko04144,map04144
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005938,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0017016,GO:0017048,GO:0019899,GO:0030139,GO:0030587,GO:0031152,GO:0031267,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032009,GO:0032502,GO:0033554,GO:0042594,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0045335,GO:0048365,GO:0048856,GO:0050896,GO:0051020,GO:0051703,GO:0051704,GO:0051716,GO:0071496,GO:0071944,GO:0090702,GO:0097708,GO:0098630,GO:0098743,GO:0099120,GO:0099568
EggNOG free text desc.Rab guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5347@1,KOG0703@2759,KOG2127@1,KOG2127@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionuDENN domain
Ec32 orthologEc-14_004120.2
Exons4
Model size681
Cds size657
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16500.4391.1prot_E-fasciculatus_F_contig16500.4391.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16500 53..2509 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928120.7391858-CDS-E-fasciculatus_F_contig16500:52..2111622928120.7391858-CDS-E-fasciculatus_F_contig16500:52..211Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 53..211 -
1695995826.4133859-CDS-E-fasciculatus_F_contig16500:52..2111695995826.4133859-CDS-E-fasciculatus_F_contig16500:52..211Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 53..211 -
1622928120.7560658-CDS-E-fasciculatus_F_contig16500:733..8921622928120.7560658-CDS-E-fasciculatus_F_contig16500:733..892Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 734..892 -
1695995826.426763-CDS-E-fasciculatus_F_contig16500:733..8921695995826.426763-CDS-E-fasciculatus_F_contig16500:733..892Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 734..892 -
1622928120.771659-CDS-E-fasciculatus_F_contig16500:1724..19731622928120.771659-CDS-E-fasciculatus_F_contig16500:1724..1973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 1725..1973 -
1695995826.436364-CDS-E-fasciculatus_F_contig16500:1724..19731695995826.436364-CDS-E-fasciculatus_F_contig16500:1724..1973Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 1725..1973 -
1622928120.7928903-CDS-E-fasciculatus_F_contig16500:2419..25091622928120.7928903-CDS-E-fasciculatus_F_contig16500:2419..2509Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 2420..2509 -
1695995826.447988-CDS-E-fasciculatus_F_contig16500:2419..25091695995826.447988-CDS-E-fasciculatus_F_contig16500:2419..2509Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16500 2420..2509 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928120.811719-UTR-E-fasciculatus_F_contig16500:2509..25331622928120.811719-UTR-E-fasciculatus_F_contig16500:2509..2533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig16500 2510..2533 -
1695995826.456874-UTR-E-fasciculatus_F_contig16500:2509..25331695995826.456874-UTR-E-fasciculatus_F_contig16500:2509..2533Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig16500 2510..2533 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16500.4391.1

>prot_E-fasciculatus_F_contig16500.4391.1 ID=prot_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp
MARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSA
SEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPE
SSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPI
KKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYG
TVRWAKRLFKTPDQHRCVS
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mRNA from alignment at E-fasciculatus_F_contig16500:53..2533-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16500.4391.1 ID=mRNA_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2481bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16500:53..2533- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCACAGAGCAAGGCGGCGGGGTTGATGGCACGAGTGACGAGCCAGCGCAA GCCGTCCAAGAAGAAGGAGAAGAAGGAGAGAAACGCCGGGGTCGCCGTAC GCTTTGGCTCGCAGGTGGGCGCGCAGGCACCGCTGCTTACTACCACTTCA GTGGCCTTGGTGTTGCGAACGGGTGGTTTCGTCGCTCTCCGCAAGGGTGG TAGACAATGTACTTGCTTGGTTTCAATTTTTTTTTTTTTCTTTCTTTTCT CTGTACGAGAGGTTCAGTCATCCCCCAGCAGCAGGGGCAGCTGCGCGATG GCTGTTCACGTTGTCATCATCGCAGCAGCAGAGGCGGCAGCAGCAGTAGC GACAACAACCAAGTGCAAACGGCAGCCAGACACACGTAAAACCCAGAGAG TTTTTAACCATGTTGGTTGGTCTTTGTTTTCTGTTCCTTCTTGAGTCTTG AAAAAAACCATACGCGATGTAAATAAAACCCCAATGATCTCCACTTCACC GACCACGGACCACTTCCATCGGAAAACGCTTATTTTTTTTGTTTCACCCT TTCTTGTCAGGAATCCACGTCGATGCTGGACCCCGCGAACCACACGAACG CGCCCGACGGCTTCAGCGCCTCGGAGATCCGCGCGGCGTTCCTCCGGTTC TTCGTTTCCATATTCCGGGGGTACCTGGCGCATGTAGTGATGCCGACGAA CAGCTCGCCCTACCCGGAGAAGCTGTTCGCCAAGGAGGCGTTCCTGAAGA GCTGCGGGCACCTGCCGGAGTCGAGCCACGCCTTCATGAATGCGTTCTTG GATAGCCAGGTATAGATATAGGTGCCGCTGCTGCGACGATACCGTTAGGT CGCACCTGCCTGCCGCTGTCGCTGTTAATGATGATGGAACTGCCGGTACG GCTAGCGGTACAGTTTCGCGGATGTAGTTTAGGGTTCAGAACACGGGGCC CATAAGCAGCAGCGCTACTGTACTGCTGTGATGAACACATTTCATAGACA TACTCTGTGCTTCTGAGATGATCACAGCTCATAGAGTTACTGCAAGGGTT TTTCTCTATGGTGGGTGGGTGAATGCTAAACAGGACCCCTCTCGGCCCAT ACCTGTGGTTTGCCTTGGAACTCCTTCCTTACCCTCTTCCTTTACTCCTA CTCACCACCGGCGGCACATGTGTGTTGAGAGCCCTCTTTGGCACAACAAG GCCAGGAGAACTGAAGTATTGGTGGAAGCGGGAGGGCATGTATTGCCCAC GACTATCAGCAGGTTCCGATTCCGAAGGGGTTGTCGTATACCATGGTATA TTGGAACCGGAAAAACATAAAAGCAGAGCAACGCGCTCGCCCCCCCCCCC CCTCTCTGCCAAGCCCATCTGCCGGCATACAGAAGGTTGTCCGCGAAATC GAGCGATTCATTGATAACGGGAGGCTAGACCGCCCACGGAGTAGATGGTC GTCGAAGACACGGCGTGACAAGGAAGATCCGCCCTTCTCTTCCCTCTTCT TGGTCCCCTTCCCGTCTTCCTGCCTCTCGAGGACGCGTGGTGAATGGTCT AACGACTAAGGCATGCAAAGCACAAGAGTACGCCCCCCCCGTCTGCCTGC CTGCCCGCCCGCCCGCCTGCCTATCTGTGTTGCCACCGCAGATGTTCGAG AGGTTTCTGGAGGAGAGGACGGCCAACCCCACGCAGCCGGAGGTTCGGTT TTTCGACGAGAGCATCGCCGCAAAGCTCAACCGCAGCAAGACCAACCCCA TCAAGAAGGACACGCCGTTCCTCAACGACCAGTCCGACGCGCACAACCAG GTAGGTAGACGGAGAGCACACTACTGAGGAGGAAATATAGGCAGATATAT CGATCGGAAAGGTAAATTTATTTCTATGGCGGGGCAGCGGCGAGCAAGCC CTTGCTTTCGCCGCTCGGTGCGAGGTTTGATGCGACTGCTGTTTTACGGA TTGCGCTGGCCGGCTAGACTAGTGCTTGCTGTACGGCCTTGTCTTGGGGG GGAAATATTCGGTAATTTGATGTCGTTCCCCGCACAGTCGGAACGGAATG GGTAGGTTTGATGGCTATAGCAGTTCCATCCCTCTTTTTATACCATTGAA CAGCAGCAGTGGTACCCACGTGACCGTGTCTAGCATACGGTTGTTGCTCT AGCCACAACACAACAATAGCAGCAAACAATCAACAAGCGAACAGCGGCGA TGTTGTCCGTACAGTGTAGCTAGCCGCCACCATACGACAACACAACAGCA CCAGCAAGCACCGACAACACCTTCTGTGGCTGCCACCACCACCACCACCA CCACCACAACAACAACCAACAGGTGTTCAACCCTCCGGCACCGTCCAACT GGGGTCTCCCCGACGACGGTAGCCAGTACGCCTACGGCTTGTCTTTCCCG CGGCTCAACAAGGATCGGTACGGCACTGTACGCTGGGCGAAGCGGCTGTT CAAGACCCCGGATCAGCACCGGTGCGTTTCT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16500:53..2533-

>mRNA_E-fasciculatus_F_contig16500.4391.1 ID=mRNA_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16500:53..2533- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCACGAGTGACGAGCCAGCGCAAGCCGTCCAAGAAGAAGGAGAAGAA
GGAGAGAAACGCCGGGGTCGCCGTACGCTTTGGCTCGCAGATGGCACGAG
TGACGAGCCAGCGCAAGCCGTCCAAGAAGAAGGAGAAGAAGGAGAGAAAC
GCCGGGGTCGCCGTACGCTTTGGCTCGCAGGAATCCACGTCGATGCTGGA
CCCCGCGAACCACACGAACGCGCCCGACGGCTTCAGCGCCTCGGAGATCC
GCGCGGCGTTCCTCCGGTTCTTCGTTTCCATATTCCGGGGGTACCTGGCG
CATGTAGTGATGCCGACGAACAGCTCGCCCTACCCGGAGAAGCTGTTCGC
CAAGGAGGCGTTCCTGAAGAGCTGCGGGCACCTGCCGGAGTCGAGCCACG
CCTTCATGAATGCGTTCTTGGATAGCCAGGAATCCACGTCGATGCTGGAC
CCCGCGAACCACACGAACGCGCCCGACGGCTTCAGCGCCTCGGAGATCCG
CGCGGCGTTCCTCCGGTTCTTCGTTTCCATATTCCGGGGGTACCTGGCGC
ATGTAGTGATGCCGACGAACAGCTCGCCCTACCCGGAGAAGCTGTTCGCC
AAGGAGGCGTTCCTGAAGAGCTGCGGGCACCTGCCGGAGTCGAGCCACGC
CTTCATGAATGCGTTCTTGGATAGCCAGATGTTCGAGAGGTTTCTGGAGG
AGAGGACGGCCAACCCCACGCAGCCGGAGGTTCGGTTTTTCGACGAGAGC
ATCGCCGCAAAGCTCAACCGCAGCAAGACCAACCCCATCAAGAAGGACAC
GCCGTTCCTCAACGACCAGTCCGACGCGCACAACCAGATGTTCGAGAGGT
TTCTGGAGGAGAGGACGGCCAACCCCACGCAGCCGGAGGTTCGGTTTTTC
GACGAGAGCATCGCCGCAAAGCTCAACCGCAGCAAGACCAACCCCATCAA
GAAGGACACGCCGTTCCTCAACGACCAGTCCGACGCGCACAACCAGGTGT
TCAACCCTCCGGCACCGTCCAACTGGGGTCTCCCCGACGACGGTAGCCAG
TACGCCTACGGCTTGTCTTTCCCGCGGCTCAACAAGGATCGGTACGGCAC
TGTACGCTGGGCGAAGCGGCTGTTCAAGACCCCGGATCAGCACCGGTGCG
TTTCTGTGTTCAACCCTCCGGCACCGTCCAACTGGGGTCTCCCCGACGAC
GGTAGCCAGTACGCCTACGGCTTGTCTTTCCCGCGGCTCAACAAGGATCG
GTACGGCACTGTACGCTGGGCGAAGCGGCTGTTCAAGACCCCGGATCAGC
ACCGGTGCGTTTCT
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