mRNA_E-fasciculatus_F_contig16500.4391.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 1.900e-144 Identity = 224/227 (98.68%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 1 SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPT+SSPYPEKLFAKEAFLKSCG+LPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHR VS
Sbjct: 612 SQSKAAGLMARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTSSSPYPEKLFAKEAFLKSCGYLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRNVS 838
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA) HSP 1 Score: 155 bits (392), Expect = 9.110e-40 Identity = 82/143 (57.34%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 124 SMLDPANHTNAPD--GFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKKDTPFLNDQSDAHNQVFNPPAPS 546
S+ D N+++A D GF+ EIRAAFLRFFVSIFR Y ++V+PT P+P++LF +EAFLK +P + FM+ FL SQMFERFLEE+ ++P QPE+RFF+ESI KLNR K IKKDTPFLN+ D H QVF+PP P+
Sbjct: 959 SLTDARNNSDAADVLGFNVHEIRAAFLRFFVSIFRTYQDYLVVPTPQDPFPKELFDREAFLKE---MPAQAQEFMSVFLQSQMFERFLEEQLSHPDQPEIRFFEESIVQKLNRGKK-IIKKDTPFLNNLGDDHTQVFSPPHPN 1097
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S2A7N5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7N5_TRICV) HSP 1 Score: 143 bits (361), Expect = 1.090e-35 Identity = 88/180 (48.89%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 106 GSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIK----KDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
G ES +LD + T DGFSA+E R AFLRFFVS+ + Y +P S F E F+K + +M+ + SQMFERF+EER ++P QPEV FFDESI AK NRS+ +K K TPFL+DQS A F PPAPSNWGLPDDG Y Y +SFP+L+++ +G VR
Sbjct: 33 GFGESVHLLDIGDET---DGFSATETRNAFLRFFVSLLQNY--EKFLPDGSMGE----FQHEEFVKDFTS-DGNCRVWMSKVVSSQMFERFIEERISDPDQPEVLFFDESIIAKNNRSRLRTVKGKGKKTTPFLSDQSGAVTDTFTPPAPSNWGLPDDGRTYHY-VSFPKLDRNLFGKVR 201
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: B7FQ36_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ36_PHATC) HSP 1 Score: 142 bits (357), Expect = 4.300e-35 Identity = 83/179 (46.37%), Postives = 106/179 (59.22%), Query Frame = 1
Query: 121 TSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPI--------KKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
T +LD + P GF +SEIR AFLR FVSIF+ Y ++ + F EAF+ S + E S F++ + +Q F RFL+ER NP+ PE+RFFDESI AK+NRSK K++T FL D S+ N+ F PP PSNWGLPDDG Y YG SFP LN + +G VR
Sbjct: 764 TKLLDKDD----PSGFDSSEIRNAFLRLFVSIFQSYRHYL---------DKNGFRSEAFIDSL-NCSERSSEFLHCVVKTQFFSRFLDERIQNPSDPEIRFFDESIIAKINRSKKQTFSKIGRGGGKRETSFLKDDSNMVNETFTPPPPSNWGLPDDGRTYHYG-SFPALNPELFGKVR 927
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S1YZ68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ68_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.620e-35 Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
+E++ +P N N GFS SEIR A LRFF SIF+ Y +V F +EAFL L +S F++ SQMFERF+EER +P QPE+R FDE+I AK NRSK T KK+TPFL+DQS F PP PSNWGLPDDG Y YG+ FP+L+ +G +R+ K
Sbjct: 771 KEASPRENPLN-MNELAGFSTSEIRYATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 939
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S4R4H9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H9_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.910e-35 Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
+E++ +P N N GFS SEIR A LRFF SIF+ Y +V F +EAFL L +S F++ SQMFERF+EER +P QPE+R FDE+I AK NRSK T KK+TPFL+DQS F PP PSNWGLPDDG Y YG+ FP+L+ +G +R+ K
Sbjct: 901 KEASPRENPLN-MNELAGFSTSEIRNATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 1069
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S4R4H5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H5_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.950e-35 Identity = 86/178 (48.31%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 112 QESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSK-TNPIKKDTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAK 642
+E++ +P N N GFS SEIR A LRFF SIF+ Y +V F +EAFL L +S F++ SQMFERF+EER +P QPE+R FDE+I AK NRSK T KK+TPFL+DQS F PP PSNWGLPDDG Y YG+ FP+L+ +G +R+ K
Sbjct: 1168 KEASPRENPLN-MNELAGFSTSEIRNATLRFFASIFKNYEKFLVKGGGEP------FQREAFLDDL-KLKGNSREFVSQVTSSQMFERFVEERITSPDQPEMRLFDETIVAKNNRSKKTVGKKKETPFLSDQSGNITDTFAPPPPSNWGLPDDGRSYHYGM-FPKLDPKAFGKIRYPK 1336
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A1V9Z028_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z028_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.770e-31 Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 1
Query: 100 RFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKK-DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
R S+ S D + NA FS +IR AFLRFFVS+ + Y ++ T++ + +F +FL+ + S F++ ++SQMF+RF E+R NPT EV FFD++I KLNRS T KK D FL D+SD + F P PS GLPD+G+ Y Y SFPRL K +GT+R + L+ T +Q R V+
Sbjct: 589 RSASEYEQSSNDSSFSVNA---FSQEDIRLAFLRFFVSLLKKYATYLNCATSTQTPTQPIFDANSFLRDNSDM--FSRPFLSIMIESQMFQRFCEDRLYNPTLNEVVFFDQAINQKLNRSLTIGKKKLDVSFLEDKSDVIRETFVAPTPSTLGLPDNGTLYHY-KSFPRLKKCLFGTIRKPRELYATREQQRYVA 777
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A7S2Y961_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y961_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.090e-31 Identity = 82/181 (45.30%), Postives = 101/181 (55.80%), Query Frame = 1
Query: 115 ESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFLDSQMFERFLEERTANPTQPEVRFFDESIAAKLNR-SKTNPIKK-------DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVR 633
+ST +LD P GFS EIR AFL+FFV I + Y ++ T K F E FL S E S A++ +++Q+FERF++ER PT EV FFD SI AK N+ KT P KK DT FL+D+S + F PP PSN GLPDDG Y YG SFP L+ YG VR
Sbjct: 573 QSTYLLD----VKEPSGFSVDEIRTAFLKFFVGILKNYREYINEET-------KTFDSEMFLASKTTYSERSQAYLKGVMETQLFERFMQERIECPTDSEVMFFDTSIDAKQNKFQKTAPFKKFRPGGKKDTSFLDDKSKVVTEKFTPPPPSNSGLPDDGRTYHYG-SFPDLDLSLYGKVR 741
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Match: A0A1V9Z8X3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8X3_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.370e-29 Identity = 80/201 (39.80%), Postives = 112/201 (55.72%), Query Frame = 1
Query: 94 AVRFGSQESTSMLDPANHTNAPDGFSASEIRAAFLRFFVSIFRGYLAHVVMPTNSSPYPEKLFAKEAFLKSCGHLPESSHAFMNAFL----DSQMFERFLEERTANPTQPEVRFFDESIAAKLNRSKTNPIKK-DTPFLNDQSDAHNQVFNPPAPSNWGLPDDGSQYAYGLSFPRLNKDRYGTVRWAKRLFKTPDQHRCVS 681
+V E+ S + AP F+ ++R AFLRFFVS+ + Y A+ + TNSS + + +L ++S A FL +SQMF+RF E+R NP+ PEV FFD++I KLNRS + KK D FL D SDA + F P PS GLPD+G+ Y Y +FPRL K +GT+R + L+ +Q R V+
Sbjct: 599 SVSMSGLEAVSSTSSLSSAAAPGVFAQDDVRMAFLRFFVSVLKRYAAY--LNTNSS-----MTNTAPIFDAASYLRDNSDALSRPFLATMTESQMFQRFCEDRLFNPSLPEVVFFDQAINQKLNRSLSLGKKKHDVSFLEDMSDAIRETFVAPTPSTLGLPDNGAVYQY-KAFPRLKKHLFGTIRKPRELYAAREQQRFVA 791 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16500.4391.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16500.4391.1 >prot_E-fasciculatus_F_contig16500.4391.1 ID=prot_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=219bp MARVTSQRKPSKKKEKKERNAGVAVRFGSQESTSMLDPANHTNAPDGFSAback to top mRNA from alignment at E-fasciculatus_F_contig16500:53..2533- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16500.4391.1 ID=mRNA_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2481bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16500:53..2533- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16500:53..2533- >mRNA_E-fasciculatus_F_contig16500.4391.1 ID=mRNA_E-fasciculatus_F_contig16500.4391.1|Name=mRNA_E-fasciculatus_F_contig16500.4391.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1314bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16500:53..2533- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |