mRNA_E-fasciculatus_F_contig1649.4382.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: D7FU53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU53_ECTSI) HSP 1 Score: 196 bits (499), Expect = 4.540e-55 Identity = 114/172 (66.28%), Postives = 131/172 (76.16%), Query Frame = 2
Query: 8 YQAQASIVEPEGTMDVPVFGHPEASVVGDVGSVSRPTGTNKDGFSRDGKMPPPKEGVRDTAVRPTTGTGPSGYYSRGGRGGVGLLALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
YQ+++S +GTM VPV G PE S+V D GS SRPT ++D SR GK+PPPK+GVR+ A RPTT G SG SRGG VGLLAL F I L NVESKML V+LPSGFRCIW +LPH+VQFV +FMM+VLLYGVNRAFDKAD+AMS+RLS AT A LHERR HH APR
Sbjct: 14 YQSESS----QGTMCVPVIG-PEVSMVCDAGSASRPTRLSRDESSRGGKIPPPKDGVREIASRPTTAAGSSG--SRGGGRVVGLLALAFALPIKLCNVESKML-VELPSGFRCIWNDLPHIVQFVAIFMMLVLLYGVNRAFDKADDAMSTRLSRATAALLHERR--HHHAPR 175
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5JQL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL3_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.980e-50 Identity = 111/202 (54.95%), Postives = 130/202 (64.36%), Query Frame = 2
Query: 47 MDVPVFGHPEASVVGDVGSVSRPTGTNKDGFSRDGKMPPPKEGVRDTAVRPTTGTGPSGYYSRGGRGGVGLLALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPRGVF*TAT*AKAASSTASTRCIISA*QKGPCSGFCWKEGTTPSP 652
M V V PE S+V D GSVSRPTGT++DG S GK+PPPK+GVR+ A+RPTT G SG VGLL L SAI L NVES ML V+LPSGFRCIW NLPHLVQ + +MVVL+YGV+R FD+AD+AMS+RLS AT AFLHERR H PR V+ K+A+STA + F EGTT P
Sbjct: 1 MGVAVVVRPEVSMVCDAGSVSRPTGTSRDGSSWGGKIPPPKDGVREIALRPTTAAGSSGSRV------VGLLILALASAIKLGNVESSML-VELPSGFRCIWNNLPHLVQIAAILLMVVLMYGVSRVFDRADDAMSARLSSATAAFLHERR--QHYPPRVVYTATREKKSAASTAVRDAAFQHKRGHHAQRFGTSEGTTTLP 193
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5JJU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU8_9PHAE) HSP 1 Score: 138 bits (347), Expect = 4.080e-34 Identity = 81/159 (50.94%), Postives = 93/159 (58.49%), Query Frame = 2
Query: 47 MDVPVFGHPEASVVGDVGSVSRPTGTNKDGFSRDGKMPPPKEGVRDTAVRPTTGTGPSGYYSRGGRGGVGLLALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
M VPV E S+V D GSVS PT KDG SRDGK+PPPKEGVR A+RPTT P+G RCIW +LPH+VQFV +F+M+VLLYGV R FDKAD+AMS+RLSCAT AFLHERR +H PR
Sbjct: 1 MCVPVIVS-EVSMVCDAGSVSHPTRLTKDGSSRDGKIPPPKEGVRVIALRPTT-----------------------------------------PAGSRCIWNDLPHIVQFVAIFLMLVLLYGVKRVFDKADKAMSTRLSCATAAFLHERRHHHAPLPR 117
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: D7G4F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F6_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 3.650e-21 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 2
Query: 275 VSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
VSAI + VE K L ++LPSG RC+W +LPH +QF +LF+M+ +LYGVNR FDKADEAM SRL+CAT L ERR HH AP+
Sbjct: 18 VSAIQVDLVEGKRL-IELPSGVRCMWNDLPHGLQFAILFLMLGILYGVNRLFDKADEAMYSRLTCATAELLRERR--HHDAPQ 97
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5L6K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.680e-20 Identity = 57/111 (51.35%), Postives = 74/111 (66.67%), Query Frame = 2
Query: 191 VRPTTGTGPSGYYSRGGRGGVGLLALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
VR +TG S GGR + L VSA+++ VE K L ++ P FRCIW +LPH +QF +LF+M+ +LYGVNR FDKAD+AM +RL+CAT L+ERR HH APR
Sbjct: 48 VRSSTGR------SLGGRRAI----LALVSAVHVDLVEGKWL-IEFPPRFRCIWNDLPHGLQFAILFLMLGVLYGVNRLFDKADQAMHTRLTCATARLLNERR--HHHAPR 145
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5JJ82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ82_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.820e-19 Identity = 53/114 (46.49%), Postives = 73/114 (64.04%), Query Frame = 2
Query: 167 KEGVRDTAVRPTTGTGPSGYYSRGGRGGVGLLALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYH 508
K+ T VR + G G G +LAL +S ++ VE K L ++ PSGFRC+W +LPH +QF +L +M+ +LYGVNR FDKADEA+ +RL+CAT L+ERRL+H
Sbjct: 40 KKAALHTLVRSSAGLG----------GRRAMLAL--ISVAHVDVVEGKWL-IEFPSGFRCMWNDLPHGLQFAILLLMLGILYGVNRLFDKADEAIYTRLTCATAGLLNERRLHH 140
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: D7G1C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C9_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 4.260e-17 Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 2
Query: 317 LVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
L++ P GFRCIW +LPH +QF +L +M+ +LYGVNR FDKADEA+ +RL+CAT+ L+E+R +H APR
Sbjct: 43 LIEFPPGFRCIWNDLPHGLQFTILLLMLGILYGVNRLFDKADEAVYTRLACATSGLLNEKRNHH--APR 109
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5JMJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ2_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.370e-16 Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 2
Query: 317 LVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYHHAAPR 523
L++ PSG RC+W LPH +QF +LF+M+ +LYGVNR FDKADEAM +R++CAT L ERR HH AP+
Sbjct: 135 LIEFPSGVRCMWNELPHGLQFAILFLMLGILYGVNRLFDKADEAMYTRVTCATAGLLRERR--HHHAPQ 201
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: A0A6H5L9J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9J2_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 4.420e-14 Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 2
Query: 260 LALGFVSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFL----HERRLY 505
+ L ++A+N V+ LLV LPSGF+C WYNL H QF +LF+MV ++Y +NR F++ D+ M +RLSCAT A++ H R++Y
Sbjct: 126 ILLATIAALNAGLVDGS-LLVDLPSGFKCAWYNLEHPAQFAILFLMVGVVYFINRLFNEVDKVMYARLSCATEAWMDEIRHSRQVY 210
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Match: D7FU60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU60_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.290e-13 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 2
Query: 275 VSAINLANVESKMLLVQLPSGFRCIWYNLPHLVQFVVLFMMVVLLYGVNRAFDKADEAMSSRLSCATTAFLHERRLYH 508
+SA+ + ESK LV+ SGF+C+WY+LPH VQF VL MM L +G+NR F K D+A +RLS A TA++ E+R H
Sbjct: 144 ISAMVVGVAESK--LVEFQSGFKCMWYDLPHPVQFAVLLMMPALFFGINRIFGKLDKAAYARLSRAVTAWMDEKRQVH 219 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1649.4382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1649.4382.1 >prot_E-fasciculatus_F_contig1649.4382.1 ID=prot_E-fasciculatus_F_contig1649.4382.1|Name=mRNA_E-fasciculatus_F_contig1649.4382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=163bp MDVPVFGHPEASVVGDVGSVSRPTGTNKDGFSRDGKMPPPKEGVRDTAVRback to top mRNA from alignment at E-fasciculatus_F_contig1649:12424..16048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1649.4382.1 ID=mRNA_E-fasciculatus_F_contig1649.4382.1|Name=mRNA_E-fasciculatus_F_contig1649.4382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3625bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1649:12424..16048+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1649:12424..16048+ >mRNA_E-fasciculatus_F_contig1649.4382.1 ID=mRNA_E-fasciculatus_F_contig1649.4382.1|Name=mRNA_E-fasciculatus_F_contig1649.4382.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1649:12424..16048+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |