mRNA_E-fasciculatus_F_contig16478.4376.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A6H5L9K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K7_9PHAE) HSP 1 Score: 179 bits (455), Expect = 6.430e-51 Identity = 83/90 (92.22%), Postives = 85/90 (94.44%), Query Frame = 1
Query: 4 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTALLARC 273
VWSTPEVVGVAPPPRTGHSAVLLPDGHTIF+HGGWDPEDEGG VKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTA+LARC
Sbjct: 652 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFIHGGWDPEDEGG-----VKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTAVLARC 736
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: D8LL74_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL74_ECTSI) HSP 1 Score: 176 bits (447), Expect = 1.460e-50 Identity = 82/90 (91.11%), Postives = 84/90 (93.33%), Query Frame = 1
Query: 4 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTALLARC 273
VWSTPEVVGVAPPPRTGHSAVLLPDGHTIF+HGGWDPEDEGG VKNFGDAYLLDTNLWEWTRGPEFLLGA EAGLRVGHTA+LARC
Sbjct: 503 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFIHGGWDPEDEGG-----VKNFGDAYLLDTNLWEWTRGPEFLLGAAEAGLRVGHTAVLARC 587
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A7S2WBH9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WBH9_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.310e-20 Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPE--FLLGADEAG---LRVGHTALLA 267
W W P + G P PRTGH+AVLL DG TI ++GGWDP DE ++ F D++LLDT++W W+ GP F+ G + RVGH+ +LA
Sbjct: 17 WNWFQPNISGKPPSPRTGHTAVLLEDGKTILIYGGWDPTDEEEEDETQI--FDDSFLLDTDMWSWSPGPNSRFVPGTESTNGGSKRVGHSGILA 108
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A7S1D7A1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7A1_CYCTE) HSP 1 Score: 86.7 bits (213), Expect = 8.150e-20 Identity = 45/95 (47.37%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRG--PEFLLGA---DEAGLRVGHTALLAR 270
W W P G P RTGHSAVLLPD TIF+HGGWDP +G + F D++ LDT+ W W++ P FL + D RVGHTA+L R
Sbjct: 31 WTWINPVAAGTIPCSRTGHSAVLLPDKKTIFIHGGWDPTVDGEEENI----FEDSFTLDTSTWTWSKASTPRFLAQSQISDGGPRRVGHTAVLCR 121
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A1Z5JA21_FISSO (Host cell factor n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA21_FISSO) HSP 1 Score: 81.3 bits (199), Expect = 5.490e-16 Identity = 40/86 (46.51%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 7 WSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTALL 264
WS + G P PRTGH A + D TI ++GGWDP DE F D++LL+T WEWT+GP+ +G+D++G RVGH A+L
Sbjct: 405 WSNVQTKGTPPCPRTGHVAFVWHD-DTICIYGGWDPNDENDV------VFADSFLLNTETWEWTKGPK--IGSDDSGARVGHRAVL 481
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A4D9CV08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV08_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-15 Identity = 45/95 (47.37%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 1 WVWSTPEVVGV-APPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEW-TRGPEFLLGADEA---GLRVGHTALLAR 270
W W P VVG P RTGH+A LL DG +I+V GGWDP+DE F DA++LDT WEW G E G + G+ VGHTA++AR
Sbjct: 524 WEWFHPMVVGCDRPAKRTGHAACLLQDGKSIWVQGGWDPQDETSE---ETTLFEDAFILDTETWEWRAAGAEVGAGEQQEEGPGVVVGHTAVVAR 615
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: W2M544_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2M544_PHYPR) HSP 1 Score: 79.0 bits (193), Expect = 3.640e-15 Identity = 45/90 (50.00%), Postives = 52/90 (57.78%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLR--VGHTALL 264
W W P VVGV P RTGHSA LL DG I V GGWDP+ + + V F DA+LLDTN WEW G+ + LR VGH A+L
Sbjct: 436 WSWFHPCVVGVPPQERTGHSATLLSDGK-ILVFGGWDPQRDDASAPTSV--FSDAFLLDTNTWEWQPAAYTDEGSADTALRGRVGHGAVL 522
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A484DUM7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUM7_BRELC) HSP 1 Score: 75.9 bits (185), Expect = 4.370e-14 Identity = 43/88 (48.86%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTALL 264
W W P V GV P RTGHSA LL DG+ +FV GGWDP+ G F DA++LDT WEW P F G + RVGH A+L
Sbjct: 407 WTWVYPNVTGVPPQERTGHSATLLKDGN-LFVFGGWDPQR--GDVNAPTSVFDDAFILDTKTWEWQPVP-FNDGRITSRGRVGHGAVL 490
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A3F2S1K7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1K7_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.130e-13 Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLR--VGHTALL 264
W W P VVGV P RTGHS+ LL +G I + GGWDP+ + + V F DA+LLDT W+W + E LR VGH+A+L
Sbjct: 442 WKWDEPTVVGVPPQARTGHSSTLLQNGK-ILIFGGWDPQRDDASSPTSV--FDDAFLLDTQSWQWEPATFAETSSTEGALRGRVGHSAVL 528
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Match: A0A3R7IR84_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IR84_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.680e-13 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 1 WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLR--VGHTALL 264
W W P VVG+ P RTGHS+ LL +G I + GGWDP+ + + V F DA+LLDT W+W + E LR VGH+A+L
Sbjct: 289 WKWDEPTVVGLPPQARTGHSSTLLQNGK-ILIFGGWDPQRDDASSPTSV--FDDAFLLDTQSWQWEPATFAETSSTEGALRGRVGHSAVL 375 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16478.4376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16478.4376.1 >prot_E-fasciculatus_F_contig16478.4376.1 ID=prot_E-fasciculatus_F_contig16478.4376.1|Name=mRNA_E-fasciculatus_F_contig16478.4376.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=91bp WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIFVHGGWDPEDEGGAGCLRVKback to top mRNA from alignment at E-fasciculatus_F_contig16478:2061..2712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16478.4376.1 ID=mRNA_E-fasciculatus_F_contig16478.4376.1|Name=mRNA_E-fasciculatus_F_contig16478.4376.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=652bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16478:2061..2712- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16478:2061..2712- >mRNA_E-fasciculatus_F_contig16478.4376.1 ID=mRNA_E-fasciculatus_F_contig16478.4376.1|Name=mRNA_E-fasciculatus_F_contig16478.4376.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=546bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16478:2061..2712- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |