mRNA_E-fasciculatus_F_contig16475.4374.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: D8LM90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM90_ECTSI) HSP 1 Score: 397 bits (1020), Expect = 1.140e-136 Identity = 221/298 (74.16%), Postives = 231/298 (77.52%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLA-----------------------------------------RHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDEAERQQYWASFRQAIRQAEHRLGQQXXXXXXXKDAPVQATE-EEGAQRANDGGSGDGVTTAARPLSECRSQARYGSGPDTVRMGREYTEGELLKIVPQVFGVRPTAGSQEL 768
GWRE+VE PGPPLVNPVV+PSGCAEHANIYAIYAVDSRQ VLNALLMEPRFLSMTPDTGL DLTAEETGRFVRTL RHQASVEGKSDLESAAFLLVTGVWAPG LIESPVLYTK+DGT+VTDYPRSLALWAGTTDGARL DD+AERQQYWASFRQAIRQAEHRLGQQ +DA VQATE EE AQRA+DG GD VTTAARP+SECRSQARYGSGPD VRMG+EYT GELL+IVPQVFGVRP AGSQEL
Sbjct: 58 GWREYVEEPGPPLVNPVVVPSGCAEHANIYAIYAVDSRQ-----VLNALLMEPRFLSMTPDTGLVDLTAEETGRFVRTLVSVVVVEVVVVVRRFSWTTHEPKSRHSDACCCRFQSCFVPPPRHQASVEGKSDLESAAFLLVTGVWAPGGLIESPVLYTKEDGTKVTDYPRSLALWAGTTDGARLDDDDAERQQYWASFRQAIRQAEHRLGQQQEQ----RDAFVQATEQEEEAQRADDG-FGD-VTTAARPVSECRSQARYGSGPDMVRMGKEYTAGELLQIVPQVFGVRPAAGSQEL 344
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A6H5KHN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN6_9PHAE) HSP 1 Score: 321 bits (822), Expect = 7.510e-109 Identity = 175/199 (87.94%), Postives = 177/199 (88.94%), Query Frame = 1
Query: 172 MTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDEAERQQYWASFRQAIRQAEHRLGQQXXXXXXXKDAPVQATEEEGAQRANDGGSGDGVTTAARPLSECRSQARYGSGPDTVRMGREYTEGELLKIVPQVFGVRPTAGSQEL 768
MTPDTGL DLTAEETGRF RTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTK DGTQVTDYPRSLALWAGTTDGARLADD AERQQY S RQAIRQAEHRLGQQ KDA VQATEEE AQRA D GSGD VTTAARPLSECRSQARYGSGPD VRMG+EYT GELL+IVPQVFGVRP AGSQEL
Sbjct: 1 MTPDTGLVDLTAEETGRFARTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKGDGTQVTDYPRSLALWAGTTDGARLADDNAERQQYSESLRQAIRQAEHRLGQQQER----KDALVQATEEE-AQRA-DNGSGD-VTTAARPLSECRSQARYGSGPDMVRMGKEYTAGELLQIVPQVFGVRPAAGSQEL 192
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A1Z5K0G4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0G4_FISSO) HSP 1 Score: 151 bits (381), Expect = 1.240e-40 Identity = 95/258 (36.82%), Postives = 133/258 (51.55%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVW-APGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLA---DDEAER----------QQYWASFRQAIRQAEHRLGQQXXXXXXXKDAPVQATEEEGAQRANDGGSGDGVTTAARPLSECRSQARYGSGPDTVRMGREYTEGELLKIVPQV 732
GWR+++E PG PL+N V P+GC EHAN Y IY +D+RQ V+ L EPRFLS+TPDTG+ DL A ET VR L + +GKSD E A LVT VW S + SP + DDGTQ+T++P SLALWA +D R A +D +++ Q+YW R+A+R AE L + + D G P C+ + R+G G DT R+ ++ ++ +++ V
Sbjct: 81 GWRQYIEEPGQPLINSNVFPTGCYEHANEYWIYLIDARQ-----VMAVLNNEPRFLSITPDTGMVDLQAGETTPVVRALFTNIIQQQGKSDFERVAIPLVTAVWFQKESHVPSPPIRIHDDGTQITNFPESLALWANVSDADRTALVQEDCSDQTCSAEALQRVQRYWDGIRRAVRHAEQSLAE---------------------LKEVDYG----------PPFSCQKKVRFGVGNDTARINDPFSSEQMTELLQSV 302
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A1Z5K7B1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7B1_FISSO) HSP 1 Score: 147 bits (371), Expect = 8.650e-40 Identity = 84/173 (48.55%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVW-APGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDE--------AER----QQYWASFRQA 480
GWR+++E PG PL+N V PSGC EHAN Y IY +DSRQ V+ L EPRFLS+TPDTG+ DL AEET VR L +GKSDLE A LVT VW S + SP + +DGT +T++P SLALWA +D R A E AE Q+YW R+A
Sbjct: 81 GWRQYIEEPGQPLINSNVFPSGCYEHANEYWIYLIDSRQ-----VMAVLNNEPRFLSITPDTGMVDLRAEETSPVVRALLEQMIQQQGKSDLEQVAIPLVTAVWFQKESHVPSPPIRIHEDGTYITNFPESLALWANVSDADRTALQEECADQTCSAEALQRVQRYWDGIRRA 248
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: B7G1X2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1X2_PHATC) HSP 1 Score: 139 bits (351), Expect = 5.000e-36 Identity = 93/266 (34.96%), Postives = 121/266 (45.49%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDE--------------------------AERQQYWASFRQAIRQAEHRLGQQXXXXXXXKDAPVQATEEEGAQRANDGGSGDGVTTAARPLSECRSQARYGSGPDTVRMGREYTEGELLKI 720
GWR++ PG PL+N VV+ SGC EHAN Y IYAVDSRQ VL L EPRFLS+TPDTGL DLT ET + V+ LA+ Q +GK + +F +V W S + SP + DGT +T++P SLALWA D R+ + A +++YW R A+R AE D P + V A P C AR G DT R+ ++ EL +
Sbjct: 78 GWRQYTSEPGQPLINSVVVVSGCHEHANQYWIYAVDSRQ-----VLAVLNNEPRFLSITPDTGLVDLTVAETDKAVKVLAQSQIQKQGKRNTTHVSFPIVVATWYHESFLPSPPMRHLPDGTAITNFPASLALWAKVNDADRVTGCDYTPTDSSSSIGSNNTVEECEASSRTLAAQRRYWDGIRSAVRAAE-------------ADRPSRD-----------------VWRANGPPFACERLARLGVDADTARINYSFSAEELHSV 308
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A1H8DWD8_9PROT (Uncharacterized protein n=2 Tax=Nitrosomonas marina TaxID=917 RepID=A0A1H8DWD8_9PROT) HSP 1 Score: 132 bits (333), Expect = 7.880e-34 Identity = 77/167 (46.11%), Postives = 100/167 (59.88%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLES---AAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDEAERQQYWASFRQAIRQA 492
GWRE+ P VNP +I +G ANIY+IY VD RQ ++ ALL EPRFLSMTPDT L D AEET V++L +Q +GK+ + + AAFL V VW + SP+LY K DGT+VTD+P SLA +AG +D R D EA Y + A+++A
Sbjct: 114 GWREYRAEPAINPVNPAMIATGDRNDANIYSIYGVDRRQ-----LVTALLNEPRFLSMTPDTALVDRNAEETYETVKSLITNQILNDGKASVTNKNEAAFLTVVSVWHSRHFVPSPILYIKKDGTRVTDFPNSLAAFAGISDQLRTEDPEA----YHVAVEAAVKKA 271
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A7S3LEC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC9_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.090e-32 Identity = 84/179 (46.93%), Postives = 102/179 (56.98%), Query Frame = 1
Query: 1 GWREHVEVPGPPLV-NPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWAPG-SLIESPVLYTKDDGTQVTDYPRSLALWAG--TTDGARLADDE----------AERQQYWASFRQAIRQAE 495
G+RE+ P PP V NPV+IP+GC ANIY +Y V S+Q VL+ L EPRFLS+TPDTGL DL A ET VR LA Q G ++ + A LVTGVW S +ESP Y +DGT+VT Y SLALW G T D +A+D+ A R Q W + IR AE
Sbjct: 35 GYREYKAEPYPPKVPNPVIIPTGCYHDANIYWLYLVKSQQ-----VLHILAGEPRFLSITPDTGLVDLKAAETSDAVRQLALGQIQKHGFTNTDVFALPLVTGVWFDAASFVESPPAYLHEDGTRVTSYADSLALWTGVQTDDLLVVAEDDDGDGEGDTNMARRSQAWDAVYDKIRTAE 208
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: B7G1J3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1J3_PHATC) HSP 1 Score: 124 bits (311), Expect = 1.470e-30 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 1 GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGARLADDEAERQQYWASFRQAIRQAE 495
G+RE+ E P + N VV+P+GCA HANIY ++ V + +LN L EPRFLS+TPDTGL DL A+ET VR +AR + K D A LVTGVW + +ESP +Y +D GT+VT + LA+WAG + L D +A WA+ IRQ+E
Sbjct: 81 GFREYREANPPTVPNAVVMPTGCAAHANIYHVFFVPTPV-----LLNVLAGEPRFLSITPDTGLVDLQADETSDTVRRVARSVIKAQHKRDDSRVAIPLVTGVWFHDTFVESPPVYVRD-GTKVTSFDGGLAVWAGV-EREDLVDADATA---WANVHTKIRQSE 235
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A813DXW5_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DXW5_POLGL) HSP 1 Score: 115 bits (289), Expect = 1.930e-27 Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 7 REHVEVP-GPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLMEPRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWAPGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGAR 426
RE+V G VNP ++ +GC EHAN+YA+Y + A L ALL EPR+LSM+PD DL AEET ++ L + S +GK++ E A L V V+ S +E+PVLYTK DGTQVT++ LA AGT+D R
Sbjct: 79 REYVPAAEGAARVNPAMVATGCWEHANVYAVYLAHEKAA-----LKALLHEPRYLSMSPDMAQMDLKAEETSDNLKRLFKAAISEKGKAETERVALLTVVSVFKGPSFVENPVLYTKADGTQVTNFHDGLAKLAGTSDAER 214
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Match: A0A7S2V7U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7U1_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.190e-24 Identity = 60/132 (45.45%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 157 PRFLSMTPDTGLADLTAEETGRFVRTLARHQASVEGKSDLESAAFLLVTGVWA-PGSLIESPVLYTKDDGTQVTDYPRSLALWAGTTDGAR------------------LADDEAERQQYWASFRQAIRQAE 495
PRFLS+ PD GL DL A+ETG + +++ +A +GK+DL A LVTG W S +E+PVLYTK DGTQVT++P SLALWA T + DD Q YW S R AIRQ E
Sbjct: 1 PRFLSIAPDLGLVDLEADETGPVITHVSQQRAQRDGKTDLSQVAIPLVTGAWYNQDSHVEAPVLYTKSDGTQVTNFPDSLALWANVTTTCQPRQGPVDTEVSCTSPTTETDDDNEYSQTYWQSIRTAIRQGE 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16475.4374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16475.4374.1 >prot_E-fasciculatus_F_contig16475.4374.1 ID=prot_E-fasciculatus_F_contig16475.4374.1|Name=mRNA_E-fasciculatus_F_contig16475.4374.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=257bp GWREHVEVPGPPLVNPVVIPSGCAEHANIYAIYAVDSRQASSREVLNALLback to top mRNA from alignment at E-fasciculatus_F_contig16475:482..2609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16475.4374.1 ID=mRNA_E-fasciculatus_F_contig16475.4374.1|Name=mRNA_E-fasciculatus_F_contig16475.4374.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16475:482..2609- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16475:482..2609- >mRNA_E-fasciculatus_F_contig16475.4374.1 ID=mRNA_E-fasciculatus_F_contig16475.4374.1|Name=mRNA_E-fasciculatus_F_contig16475.4374.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1542bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16475:482..2609- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |