mRNA_E-fasciculatus_F_contig1647.4371.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1647.4371.1
Unique NamemRNA_E-fasciculatus_F_contig1647.4371.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 6.920e-164
Identity = 243/252 (96.43%), Postives = 243/252 (96.43%), Query Frame = 1 
Query:   25 MGIRAAACSLLFAARTSTACAFRIQAAARPHPLGFAAAAASRRGYKSTTTAMSAAGGNELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            MGIRAAACSLLFAAR STACAFRIQAAARP PLGF AAA SRRGYKSTTTAMSA GGNEL MDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFV NFAGVKTSTVKITPENEKLLV GYEART KELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK
Sbjct:    1 MGIRAAACSLLFAARASTACAFRIQAAARPCPLGFPAAA-SRRGYKSTTTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A7S1TVC6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVC6_9STRA)

HSP 1 Score: 260 bits (664), Expect = 4.410e-82
Identity = 133/208 (63.94%), Postives = 161/208 (77.40%), Query Frame = 1 
Query:  166 TTTAMSAAGGNELEMDAFAMRQFTDES--YTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTV-ETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            T+T M+ A  +EL +D FA+RQF D    YTGTKV++D  EFE K+NE + A G  L +GYAPFCKH+FV NFAGVK ST+ ITPENE LL + YEARTE+ELP+LSR+F    V E PE K+LDIILYSREQI KE A M +   D+ APWGIISVK+QDVD+E+PMQPITMMRNALG+++GGSGV L REKY +SV FW  +AP+K
Sbjct:   46 TSTRMAMASTHELVLDEFALRQFNDRDPGYTGTKVSFDEAEFEAKINEAYDAGGKALVDGYAPFCKHIFVPNFAGVKASTLPITPENEHLLRSSYEARTEQELPVLSRYFPLAAVGEPPECKYLDIILYSREQIAKEAADMDRAAPDTTAPWGIISVKAQDVDYELPMQPITMMRNALGRDQGGSGVELVREKYDESVAFWSGNAPIK 253
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BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK)

HSP 1 Score: 253 bits (646), Expect = 1.440e-79
Identity = 125/204 (61.27%), Postives = 154/204 (75.49%), Query Frame = 1 
Query:  169 TTAMSAAGGNELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            TT   A+   E+ +D F MRQFTD++YTGTK+ YDP +FE K+N++F A    L +GYAPFCKH+FV NFAGV  S   IT EN  LL +GYEARTEKELP+L RWF +  V   E +FLDIILYSREQIRKE  AMG++   S+APWGI+SVK+QD+++EIPMQPITMMRNALG ++GGSGV L+ + Y  SV FW DHA +K
Sbjct:   38 TTLRMASSEREIVIDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMGEDS-GSDAPWGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATIK 240
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A0M0KA33_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KA33_9EUKA)

HSP 1 Score: 247 bits (631), Expect = 6.110e-78
Identity = 120/193 (62.18%), Postives = 153/193 (79.27%), Query Frame = 1 
Query:  208 MDAFAMRQF-TDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWF-ESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            +D FA +QF  + +Y GT+V YD Q FE K+NE++ +    L +GYAPFCKH+FV NFAGVK + + +TPENE  L +GYEARTE+EL +L+RWF + G  E   A+++DIILYSREQI KE AAMG+E+E + APWGIIS+K+QDV +E+PMQPITMMRNALGKEEGGSGVP+ER KY++SV FW  HAP+K
Sbjct:    4 IDPFAFKQFDANIAYEGTRVEYDKQAFEAKINELYASGDYPLVDGYAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPTVARYMDIILYSREQINKEAAAMGREEEPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPIK 196
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BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.690e-77
Identity = 122/190 (64.21%), Postives = 146/190 (76.84%), Query Frame = 1 
Query:  208 MDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPV 777
            +D F +RQF D++YTGT V YD Q+F+DKVNE +   G  L +GYAPFCKH+FV NFAGV+ S V IT EN  L+ + Y+ART+KEL +L RW     VE  +A FLDIILYSREQI KE  AMG+EK D++APWGIISVK+QDVDHEIPMQPITMMRNALGKE GGSGV L R+KY +SV FW+ H  +
Sbjct:   73 LDKFCIRQFDDDNYTGTNVYYDKQQFQDKVNE-YHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261
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BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT)

HSP 1 Score: 244 bits (622), Expect = 1.640e-76
Identity = 124/201 (61.69%), Postives = 150/201 (74.63%), Query Frame = 1 
Query:  178 MSAAGGNELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPE-AKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPV 777
            MSAA   +  +D F +RQF D  Y+GTKVA+D  +F +++     A    L +GYAPFCKH+FV NF    T  + ITPENE LL T Y+ARTE+ELP+L+RWF + TV  P  AKFLDIILYSREQIRKE  AMG+  + +E PWGIISVK+QDVD+E+PMQPITMMRNALGK EGGSGVPL REKY +SV FW+ HAP+
Sbjct:    1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTE-PWGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: K3X1V7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1V7_GLOUD)

HSP 1 Score: 243 bits (621), Expect = 3.590e-76
Identity = 116/197 (58.88%), Postives = 149/197 (75.63%), Query Frame = 1 
Query:  196 NELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKE--KEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            +EL +D F +RQF D  Y GT++ YD  EFE K+NEI+ A   +L +GYAPFCKH+F+ NF   + + VKITP N +LL + YEAR   ELP+L RWF S +V    AK+LD+ILYSREQIRKE  A G    +E  +APWGIISVK+QDVD+E+PM P+T+MRNALGKEEGGSGVPL R++Y++SVE+W++HA VK
Sbjct:   18 HELVLDRFCLRQFDDPQYLGTQIKYDKVEFEKKINEIYLARNKELVDGYAPFCKHLFIENFTDTRLNVVKITPSNSRLLQSDYEARAPNELPVLVRWFPSHSVTPLVAKYLDVILYSREQIRKENEATGNPNPEEQDDAPWGIISVKAQDVDYELPMNPVTVMRNALGKEEGGSGVPLNRDEYLKSVEYWKNHALVK 214
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A0L0GAW9_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GAW9_9EUKA)

HSP 1 Score: 241 bits (614), Expect = 4.960e-75
Identity = 116/191 (60.73%), Postives = 144/191 (75.39%), Query Frame = 1 
Query:  208 MDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            MD FAMRQF D +YTGT++ +DP EFE KVNE + +    L++GYAPFCKH+F+ NF GVK    +IT +N  LL T YEAR+EKELP+L R+F++  V  P+A  LDIILYS+EQI KE  AMG   +   APWGIISVK Q  D+E+PMQPITM+RNALG++EGGSGV LEREKY +SV FW++HA  K
Sbjct:   30 MDDFAMRQFDDPNYTGTRIKFDPSEFEAKVNEFYTSGEATLKDGYAPFCKHLFIPNFCGVKCGYARITADNRSLLQTEYEARSEKELPVLVRFFKTEDVTAPDATHLDIILYSKEQIIKENEAMGNPGKIMSAPWGIISVKGQTKDYELPMQPITMLRNALGRDEGGSGVKLEREKYSESVNFWKEHASFK 220
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: A0A7S0P3Z7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3Z7_9EUKA)

HSP 1 Score: 241 bits (614), Expect = 7.600e-75
Identity = 115/192 (59.90%), Postives = 146/192 (76.04%), Query Frame = 1 
Query:  208 MDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVE-TPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            +DAF +RQF D +YTGT+VA+D  +FE ++N    +    L +GYAPFCKH+FV NF       + ITP+NE LL +GY+ARTE+ELP+L RWF + ++   P AK+LD+ILYSREQIRKE AAMG+  +   + WGIISVK+QDVD+E+PMQPITMMRN LGKEEGGSGVPL RE Y +SV+FW  HAP+K
Sbjct:   42 LDAFVLRQFDDAAYTGTRVAWDKADFESRINAAHESGASPLVDGYAPFCKHLFVPNFTPAIMPYLPITPDNEGLLRSGYDARTEQELPVLCRWFPAASMPLAPRAKYLDVILYSREQIRKEAAAMGRADDGETSAWGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPLVREAYAKSVDFWSKHAPLK 233
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Match: G5AA41_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G5AA41_PHYSP)

HSP 1 Score: 240 bits (613), Expect = 1.700e-74
Identity = 113/196 (57.65%), Postives = 155/196 (79.08%), Query Frame = 1 
Query:  199 ELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDS--EAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 780
            ++ +D FA RQF D++Y+GTK+ +D QEF  K+NEI+ A G +L +GYAPFCKH+FV NF G + + V IT  N  +L++ YEARTE ELP+LSRWF S +V    A++LDIILYSREQI KE  A+    + +  ++PWGIIS+K+QDVDHE+PM+PITMMRNA+GKE+GGSGVP++R++YM++VE+WR+HA +K
Sbjct:   50 DIVLDGFAKRQFDDKTYSGTKLDFDKQEFVRKINEIYEANGKQLVDGYAPFCKHLFVKNFTGARLNMVAITQANAHMLMSDYEARTEYELPVLSRWFPSHSVTPKVAEYLDIILYSREQIIKENEAVDVPADPTHDDSPWGIISIKAQDVDHELPMKPITMMRNAVGKEQGGSGVPIDRDEYMKAVEYWRNHAVIK 245
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1647.4371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP80_ECTSI6.920e-16496.43Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S1TVC6_9STRA4.410e-8263.94Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3Y2J4_HETAK1.440e-7961.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0M0KA33_9EUKA6.110e-7862.18Flagellar associated protein n=1 Tax=Chrysochromul... [more]
A0A7S2UWN7_9STRA2.690e-7764.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4FA99_CHRCT1.640e-7661.69Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K3X1V7_GLOUD3.590e-7658.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0L0GAW9_9EUKA4.960e-7560.73Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S0P3Z7_9EUKA7.600e-7559.90Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
G5AA41_PHYSP1.700e-7457.65Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1647contigE-fasciculatus_F_contig1647:2284..7149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.5
Seed ortholog evalue2.5e-130
Seed eggNOG ortholog2880.D7FP80
EggNOG free text desc.Protein of unknown function (DUF3228)
EggNOG OGs29VSF@1,2RXMS@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionflagellar associated protein
Ec32 orthologEc-08_000490.1
Exons7
Model size1142
Cds size759
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928116.3653147-UTR-E-fasciculatus_F_contig1647:2283..23071622928116.3653147-UTR-E-fasciculatus_F_contig1647:2283..2307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1647 2284..2307 +
1695995825.1623504-UTR-E-fasciculatus_F_contig1647:2283..23071695995825.1623504-UTR-E-fasciculatus_F_contig1647:2283..2307Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1647 2284..2307 +
1622928116.4843647-UTR-E-fasciculatus_F_contig1647:6790..71491622928116.4843647-UTR-E-fasciculatus_F_contig1647:6790..7149Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1647 6791..7149 +
1695995825.2399044-UTR-E-fasciculatus_F_contig1647:6790..71491695995825.2399044-UTR-E-fasciculatus_F_contig1647:6790..7149Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1647 6791..7149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928116.3801148-CDS-E-fasciculatus_F_contig1647:2307..24451622928116.3801148-CDS-E-fasciculatus_F_contig1647:2307..2445Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 2308..2445 +
1695995825.1719346-CDS-E-fasciculatus_F_contig1647:2307..24451695995825.1719346-CDS-E-fasciculatus_F_contig1647:2307..2445Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 2308..2445 +
1622928116.3925128-CDS-E-fasciculatus_F_contig1647:3143..31921622928116.3925128-CDS-E-fasciculatus_F_contig1647:3143..3192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 3144..3192 +
1695995825.1802382-CDS-E-fasciculatus_F_contig1647:3143..31921695995825.1802382-CDS-E-fasciculatus_F_contig1647:3143..3192Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 3144..3192 +
1622928116.4076939-CDS-E-fasciculatus_F_contig1647:3633..37161622928116.4076939-CDS-E-fasciculatus_F_contig1647:3633..3716Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 3634..3716 +
1695995825.1887891-CDS-E-fasciculatus_F_contig1647:3633..37161695995825.1887891-CDS-E-fasciculatus_F_contig1647:3633..3716Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 3634..3716 +
1622928116.4245815-CDS-E-fasciculatus_F_contig1647:4379..44231622928116.4245815-CDS-E-fasciculatus_F_contig1647:4379..4423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 4380..4423 +
1695995825.19754-CDS-E-fasciculatus_F_contig1647:4379..44231695995825.19754-CDS-E-fasciculatus_F_contig1647:4379..4423Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 4380..4423 +
1622928116.4367945-CDS-E-fasciculatus_F_contig1647:4893..50171622928116.4367945-CDS-E-fasciculatus_F_contig1647:4893..5017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 4894..5017 +
1695995825.2068114-CDS-E-fasciculatus_F_contig1647:4893..50171695995825.2068114-CDS-E-fasciculatus_F_contig1647:4893..5017Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 4894..5017 +
1622928116.4541094-CDS-E-fasciculatus_F_contig1647:5534..56171622928116.4541094-CDS-E-fasciculatus_F_contig1647:5534..5617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 5535..5617 +
1695995825.2160225-CDS-E-fasciculatus_F_contig1647:5534..56171695995825.2160225-CDS-E-fasciculatus_F_contig1647:5534..5617Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 5535..5617 +
1622928116.471857-CDS-E-fasciculatus_F_contig1647:6552..67901622928116.471857-CDS-E-fasciculatus_F_contig1647:6552..6790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 6553..6790 +
1695995825.229052-CDS-E-fasciculatus_F_contig1647:6552..67901695995825.229052-CDS-E-fasciculatus_F_contig1647:6552..6790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1647 6553..6790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1647.4371.1prot_E-fasciculatus_F_contig1647.4371.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1647 2308..6790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1647.4371.1

>prot_E-fasciculatus_F_contig1647.4371.1 ID=prot_E-fasciculatus_F_contig1647.4371.1|Name=mRNA_E-fasciculatus_F_contig1647.4371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=253bp
MGIRAAACSLLFAARTSTACAFRIQAAARPHPLGFAAAAASRRGYKSTTT
AMSAAGGNELEMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGG
KLEEGYAPFCKHVFVSNFAGVKTSTVKITPENEKLLVTGYEARTEKELPI
LSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIIS
VKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAP
VK*
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mRNA from alignment at E-fasciculatus_F_contig1647:2284..7149+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1647.4371.1 ID=mRNA_E-fasciculatus_F_contig1647.4371.1|Name=mRNA_E-fasciculatus_F_contig1647.4371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4866bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1647:2284..7149+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGAGGCAGGGGGACACAAGAGTCGATGGGGATTCGAGCAGCCGCGTGCTC
TCTGTTGTTCGCTGCCCGGACCTCGACTGCTTGCGCTTTCCGGATCCAAG
CAGCAGCGCGGCCGCACCCTCTCGGATTCGCAGCAGCAGCAGCATCCCGC
AGAGGATACAAGGTATTCCAGTAGGTGTGTTTTGGTGTTATCCTGCAGGC
CGAGCTAGTCAGCTACAGCAGTAGGTTGTGTTGAGCGGGCAACGGACTGA
GAGAGTCCGGCGCCTACACCGAGGTCCCCTCTAGAGGGGGACGCCGTTGA
CTGCACGTGCTTCATTCAGCCTTGTCGTTGTTTGGACCGATTCACATTTT
GGCTGTTGCCCCTGTGGGGGCAGCACCGCCGCCTGCGTCCTGCTGTTGTG
GGGTGTGCTTTCTTGCGTCATCCATCCTTCTCAGTGCTGGGTGTATGTAC
TGCTGCACCAAGCAATAGCTTTGACAAAGGATTCGAGCGATATACCGTCC
GTAGGTACCTGCTACCTGTCATGTTTGATCCCTGTACTGCCGTGCAGACA
CCACGGCGGTTGCCCCGGCTGTTGCCGAAAACTTTACCGTTGCTACAATA
CTGCACCTCTGCTGTGAGGTGTGCTCTCTTGCGTCACGTCTCATTGATCG
TGCATACTTGTACAGAGACCGTGCCCGCCTGTGTGTCAACTGCTGTTATT
GCGTTTCGTGCCTGCACTGCCGTATGGTGCTGTTTCCACGCGTTTTTAAC
GTGTACGGTAGTGCGAACACGCCGCGCATTCCATTGCTTGCGATGGTGTT
GTTTAGCGCTTTATGATTCCAGCTCCCCCCGCCCCCCCCTCATGCTCACT
TGTTCTCCAGAGCACAACTACGGCAATGTCGGCCGCAGGTGGCAACGAGC
TCGAAATGGGTGAGAGCAGCAGGCCGCAGCAGAGCCGGCCCTTACGGCCA
TGGCCTTTAGATAAAAACCAAGTCTATCCTCTGCCGGCCGTAGTTTGTAT
CGCTTCTCTATCTGAGTTCAACGCATCAGGAGTCGCTATGTGCCGCAACG
AGCCGCCACCGCACCCCAGTTTGAGCTCCAACGCACAGGAGACGCTGTCT
CACCTGCACTAGTACCATCATATGGACCTAGCAGGGAACATGTCGGCCAC
CCATTCTCTTAAAACGATCTTGTCTTGAGAACCACCCGGTAAGCTAGGTC
TCACGCGCTGCATGCATGTAAGTTTACCCTAGTGTTCAACATCTGACGCC
TCTACTTCATCGATGCTGCTACAGGCTAGTAGTGTTTAATGAGACCTCGC
GCCTCCCCTTCCCCCTCACGCTGGCAATATACACTTTTGCAATAAACCAG
ACGCGTTCGCGATGCGACAATTTACTGACGAGAGCTACACGGGGACCAAG
GTGGCCTACGACCCACAGGAGTTTGAGGATAAGGTATGCTATCCATACAA
CCGACATCACACAGCCAGCGTCGTCGTAATTTTCCTCCTTTTTTTTCCAT
ATTGTACGCATGAAAATAAGCAATTCGTCTCTCATTTGGTATGCAAAGTA
TGATATGTAGAGATGAGTTTTTTAATTGGCAGATTAAAGTAAAACCGTCT
CCTATTGTGGAACGGTTCCTATTGTAGTGGTTTCGTGTTTTTGGATTCTT
GGGCAGACAGAGTTCACGCCTGCCTGAAACGTACACAGATGGAGCAAACG
GAAGCAGGCAAAACCGCCAGAAGAGCAAACAGTTCTACGCTGCCGCTTGT
AGTGCTTTTTTGGTTTGGAGATATGGCATACATACTGCTGTGGGTGCTTG
AACGTAGCTGCTTCGTGCCAGATATTCATGTGTAGCGTTGGCTTTTAGAC
GACAACGTTTCGTGATACAACGGAAACAGCAGCGTTGGAGTCATGTGTAA
TCGTACTGCTTGCAACCCCCGCCCACGCCGATTTTCCTTCTTCTCGTGTG
CGAACCCCCCTACCTGGACACGCGTGCACGACATCACGCGACTCCCCCAC
CACGCATCACGCCACGCCTTGACGGAATCACGCCACGCCTTGACGGAATC
ACGCCACGCCTTGACGGAATCACGCCACGCCTCGACGGAAGCCTAGGTGA
ACGAAATTTTCAGGGCCGCTGGAGGGAAGCTGGAGGAAGGGTGAGTGAGG
AGCTGTGCCGCGCCCACCTTTGTGACTTTGTAACCCCACCGCGCTATCAT
ATCATTTCGCGGGGTTGGGGGCACCCTACGTTTACGTCCGCGCGGGGCTG
CGGGGGGCTGGTATATACTGATCCTGATGTTGGTGCGTCACCCTCGGGTG
TCGTTCTTTATCATTCAGGGGGGTGTCGTATATCAGTACGGGGGTGTCGT
ATATCAGTAAGGGGGTGTCGTGTATCAGTAAGGGGTATGTCGGGAGTCCG
GCTCGCGTGGGGTAGTATGGGATGTGTCGGGCGTCCGGGGTGTGTGTTGG
GCGACTCCACCACGATACCGTAACAAACAGCACGTGCGTCGCAATTCCTT
CCAAACATGCATGCATCACCCGAGAACGAAAAATACTATAATCTCCTATT
TGTCTTGGCGTTCCGTGGCAATCTGTCTGTTTGGTGCCTTTTTCTTCCTT
TCTTTTGCAGATACGCGCCGTTCTGCAAGCACGTGTTCGTGTCTAACTTT
GCCGGCGTGAAGACGAGCACGGTGAAAATCACACCGGAGAACGAGAAGCT
TTTGGTCACTGGGTACGAGGCCCGAACAGAGAAGGTAAACTTAAATTTGC
TGCTTCTGTATTTCTATATCGTGCAACGTCGTAGGTGGTCTCATGTTCAG
CGGCTCCGTGGCTGACTCTATTCCTGATTGCTTTTCGCCACGTGTGTGTT
GATCGAAGGCAGATCCATTTTAACACCGCTGTTTCGGAAAGCCTCCATCA
GAGCGTGCTCTTCCTCTTCCTGACATACTGTCGCAGTGATTCGACTTACG
GAGGCCAATGCGAACTTGCAGCGAAGATCTACCTTTGATTCCGACCCGCC
GCCCTTCCTTGTGTTTGATGTTTTTTTTTTTTTTCCCAGTGATTGCATTG
GGTGCTGATGGTCCCTCAAGGAGAGGAACAAGAAGAGCGGTACAAAACAA
ACACTCTCAACCTCTGAGAAACTGCAACACCCGCCCCTTGAGCGTCATCA
CTCTTGTCTGTGGCGTTTGCCTGTTGTCTGAAGATAATCATTCGCGACTT
TTTTTGCTTTTTGCTGGTATGGTGTTGCGGCGGAATCTTGACCCGCGGCA
GGAGCTACCGATTCTGTCGCGATGGTTCGAGTCCGGCACGGTGGAAACGC
CAGAGGCAAAGTTTCTCGACATCATCTTATACAGGTTGGTTCATGGGACT
TCGTCTCTCTCGTAAACGGACGTGTCTAGCTGCTCGGGAGCATCTCGCGC
TCATGTTGGGTAGGTGCGACGTATAGAAGTCGAAATCAAACTGGTATATG
ATAGTCTAATGGGTTGATTATAGCTTCTGTAGAAGGCGCTCTTGGCGTCT
AGGGTGCCGTGCCGTGACTCATGTGTTGCCGACAGTATTGTGTGTCCTTC
CGGCGACTCATGTGTTACCGACGCTATCTGCCATTATTTTCTGCCATTTG
ACGTTGTATTACCGCGTGGTTGTGGCGCGCAATCGTTCTTGAGACGGAAT
TAAAAAAAGTATGCAAAACACCATGGGCGTTACGGCACCGTCTACTGAAG
GACGGAACGTTCAACCTCCTGGTTGTAGTTTAACGTGCGACAGATTTGAT
GTTGGTGTACTCCGTTGGTGCACTCCAGCAACGATAGCGTAAGGAGGCGG
CAGCCCGGTGTGTTTGTTGGCCGCTCGAAGCGCGAAACCGCCGCCGCCGT
GATGTAGGTGAAACCCCATCGTGCACTGCTGTCTGGCCTTTGTTTTAGAT
GTTCTGTTCGTACGCGTACAATTCTTCCAAAACTGTCATTTTTGGTGGCG
GCACAATTCTTGGTTGTGAAGACATCGAGGCTTAAAAATCGGCCCAGGAG
GGTGTGCCATCTCTCCGCCTCTAACGGTAACCCCAACATTCGATTATTTT
AGAGGCTTTTCCGTGTAGATTTAAGTGTCTGCGCGCCTGGTTGTTGTAAT
TTTTTTATATTTCTGTATTGCTGAGACTGACGTTATTGACTACACACGTT
CGTTGTTGCCGATTCTCAAGTTTCTGGCTTGTTAAGCCTGCAGTTCTTAA
TATCCAAACGTCTTGAGTTCGTCATGTATGTCCCTCGTGCTTGCTCTTCC
CGATGACTTGTGCATCCAGCCGAGAACAGATCCGTAAGGAAACCGCGGCG
ATGGGGAAGGAGAAGGAAGACTCGGAGGCCCCGTGGGGTATAATCTCGGT
CAAGTCGCAGGACGTGGACCACGAGATCCCGATGCAGCCCATCACCATGA
TGCGCAACGCGCTTGGGAAGGAGGAGGGGGGGTCTGGAGTACCGTTGGAG
CGGGAGAAGTACATGCAGAGTGTTGAATTCTGGAGGGATCACGCCCCTGT
AAAGTAACGGGGCTTAATTGTAAGAATACTGCAGGCTGCTGGGCGGTGTG
TCTGTTGGATGGATTCTTGGAGGAGGCGCCACTACTTACCATAGGAACCT
CTTACCTTTGCCCAAGGCTCGTTTCTTACTTGCTCCTCTGTGGGGTATGT
AGCCCAACAGCGACAATGCTGATTTTTGTATGCGAGGACTACTGTACCTG
ATCACACGGTCAAGTTTCGTAGTTCCTCTGTGAGGTACCCAAACATTGAT
TTTTTTACGGCAGGATTCCCAACTGAGCACTTGCTCTTCTCATGGCCAAG
TTCTTCACGGATTTGGAGCCTGAAGTTGTCAGTCCACTCCCAATGTTGTC
TACAACAACCGCCCCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1647:2284..7149+

>mRNA_E-fasciculatus_F_contig1647.4371.1 ID=mRNA_E-fasciculatus_F_contig1647.4371.1|Name=mRNA_E-fasciculatus_F_contig1647.4371.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1518bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1647:2284..7149+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGGATTCGAGCAGCCGCGTGCTCTCTGTTGTTCGCTGCCCGGACCTC
GACTGCTTGCGCTTTCCGGATCCAAGCAGCAGCGCGGCCGCACCCTCTCG
GATTCGCAGCAGCAGCAGCATCCCGCAGAGGATACAAGATGGGGATTCGA
GCAGCCGCGTGCTCTCTGTTGTTCGCTGCCCGGACCTCGACTGCTTGCGC
TTTCCGGATCCAAGCAGCAGCGCGGCCGCACCCTCTCGGATTCGCAGCAG
CAGCAGCATCCCGCAGAGGATACAAGAGCACAACTACGGCAATGTCGGCC
GCAGGTGGCAACGAGCTCGAAATGGAGCACAACTACGGCAATGTCGGCCG
CAGGTGGCAACGAGCTCGAAATGGACGCGTTCGCGATGCGACAATTTACT
GACGAGAGCTACACGGGGACCAAGGTGGCCTACGACCCACAGGAGTTTGA
GGATAAGACGCGTTCGCGATGCGACAATTTACTGACGAGAGCTACACGGG
GACCAAGGTGGCCTACGACCCACAGGAGTTTGAGGATAAGGTGAACGAAA
TTTTCAGGGCCGCTGGAGGGAAGCTGGAGGAAGGGTGAACGAAATTTTCA
GGGCCGCTGGAGGGAAGCTGGAGGAAGGATACGCGCCGTTCTGCAAGCAC
GTGTTCGTGTCTAACTTTGCCGGCGTGAAGACGAGCACGGTGAAAATCAC
ACCGGAGAACGAGAAGCTTTTGGTCACTGGGTACGAGGCCCGAACAGAGA
AGATACGCGCCGTTCTGCAAGCACGTGTTCGTGTCTAACTTTGCCGGCGT
GAAGACGAGCACGGTGAAAATCACACCGGAGAACGAGAAGCTTTTGGTCA
CTGGGTACGAGGCCCGAACAGAGAAGGAGCTACCGATTCTGTCGCGATGG
TTCGAGTCCGGCACGGTGGAAACGCCAGAGGCAAAGTTTCTCGACATCAT
CTTATACAGGAGCTACCGATTCTGTCGCGATGGTTCGAGTCCGGCACGGT
GGAAACGCCAGAGGCAAAGTTTCTCGACATCATCTTATACAGCCGAGAAC
AGATCCGTAAGGAAACCGCGGCGATGGGGAAGGAGAAGGAAGACTCGGAG
GCCCCGTGGGGTATAATCTCGGTCAAGTCGCAGGACGTGGACCACGAGAT
CCCGATGCAGCCCATCACCATGATGCGCAACGCGCTTGGGAAGGAGGAGG
GGGGGTCTGGAGTACCGTTGGAGCGGGAGAAGTACATGCAGAGTGTTGAA
TTCTGGAGGGATCACGCCCCTGTAAAGTAACCGAGAACAGATCCGTAAGG
AAACCGCGGCGATGGGGAAGGAGAAGGAAGACTCGGAGGCCCCGTGGGGT
ATAATCTCGGTCAAGTCGCAGGACGTGGACCACGAGATCCCGATGCAGCC
CATCACCATGATGCGCAACGCGCTTGGGAAGGAGGAGGGGGGGTCTGGAG
TACCGTTGGAGCGGGAGAAGTACATGCAGAGTGTTGAATTCTGGAGGGAT
CACGCCCCTGTAAAGTAA
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