mRNA_E-fasciculatus_F_contig16446.4361.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: D8LU92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU92_ECTSI) HSP 1 Score: 308 bits (788), Expect = 2.060e-94 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
Query: 1 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKLNE 462
TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKLNE
Sbjct: 334 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKLNE 487
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A6H5LAD9_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAD9_9PHAE) HSP 1 Score: 257 bits (656), Expect = 8.600e-85 Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 1
Query: 1 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLE---APVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDM 393
TLTITRPPRNRLPLVDFSYRPLFASLSV+NILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLE APVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDM
Sbjct: 90 TLTITRPPRNRLPLVDFSYRPLFASLSVDNILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEVGEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDM 223
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A836CKZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ6_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.300e-55 Identity = 106/192 (55.21%), Postives = 126/192 (65.62%), Query Frame = 1
Query: 1 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLE-----------------------------------APVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMG-----APRRRPHLPEREASKLRQKL 456
TL + RPP+NRLPLVDFSYRPLF LSV+N++ FG LLTEAKV LCSSH+ALL P AE LLSLLFPFVWQGAYIPVMP M +LE APVPFLVGI++ YL++ +++RP GVVFVDLDND ++LGLDE+ PRR PH+P+RE +KLR KL
Sbjct: 657 TLLLKRPPKNRLPLVDFSYRPLFTCLSVDNVIAVFGCLLTEAKVVLCSSHFALLNPVAEALLSLLFPFVWQGAYIPVMPSAMTAMLEGRLHTRHAQEVCVYIMCVRXXXXXXXXXXXXXXXXAPVPFLVGINAEYLRDLPADQRPLGVVFVDLDNDVVHLGLDEEKSRPNYPVPRRIPHMPDRETAKLRLKL 848
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A7S1YZ68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ68_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.820e-54 Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 4 LTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGL-DEDMGAP----RRRPHLPEREASKLRQKLNE 462
++I RP NRLPLV FSY PLFASLSV NIL G LL E +VA+CS HYALL P E L SLLFPFVWQG YIP+MP++M DVL+APVPFLVG+HSRYL++ + RP GVVFVDLD D ++LG DED+G+ R P LP+++A+KLR KL E
Sbjct: 504 VSIVRPAANRLPLVGFSYHPLFASLSVGNILVVLGCLLKETRVAICSQHYALLGPVCEALTSLLFPFVWQGMYIPIMPYSMLDVLDAPVPFLVGLHSRYLKDVQAPARPIGVVFVDLDYDIVHLGFEDEDLGSGSLYGRCTPALPDKDAAKLRSKLEE 661
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A8J9T554_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T554_PHATR) HSP 1 Score: 193 bits (491), Expect = 1.830e-54 Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 1 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKL 456
T +I RPP N+LPL DFS++PLFA+LSV N++ G LL E +VAL S HYA+LAP AE L+SLLFPF WQG Y+PV+P+NM D+L APVPFLVG+HSRYL + + RP+GVVFVDLD D I+LG + D PR P LPER+A KL+ KL
Sbjct: 477 TWSIGRPPENQLPLADFSFQPLFAALSVSNVMVVIGCLLEEGRVALLSRHYAMLAPTAEALVSLLFPFHWQGMYLPVLPYNMIDILGAPVPFLVGLHSRYLVDVPAGSRPRGVVFVDLDRDVIHLGYEYDEVTPRSSPALPERQALKLKSKL 628
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A6V2ECL4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ECL4_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.910e-54 Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 4 LTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGL-DEDMGAP----RRRPHLPEREASKLRQKLNE 462
++I RP NRLPLV FSY PLFASLSV NIL G LL E +VA+CS HYALL P E L SLLFPFVWQG YIP+MP++M DVL+APVPFLVG+HSRYL++ + RP GVVFVDLD D ++LG DED+G+ R P LP+++A+KLR KL E
Sbjct: 901 VSIVRPAANRLPLVGFSYHPLFASLSVGNILVVLGCLLKETRVAICSQHYALLGPVCEALTSLLFPFVWQGMYIPIMPYSMLDVLDAPVPFLVGLHSRYLKDVQAPARPIGVVFVDLDYDIVHLGFEDEDLGSGSLYGRCTPALPDKDAAKLRSKLEE 1058
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A7S4R4H9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H9_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.990e-54 Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 4 LTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGL-DEDMGAP----RRRPHLPEREASKLRQKLNE 462
++I RP NRLPLV FSY PLFASLSV NIL G LL E +VA+CS HYALL P E L SLLFPFVWQG YIP+MP++M DVL+APVPFLVG+HSRYL++ + RP GVVFVDLD D ++LG DED+G+ R P LP+++A+KLR KL E
Sbjct: 634 VSIVRPAANRLPLVGFSYHPLFASLSVGNILVVLGCLLKETRVAICSQHYALLGPVCEALTSLLFPFVWQGMYIPIMPYSMLDVLDAPVPFLVGLHSRYLKDVQAPARPIGVVFVDLDYDIVHLGFEDEDLGSGSLYGRCTPALPDKDAAKLRSKLEE 791
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A7S4R4H5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4H5_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.000e-54 Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1
Query: 4 LTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGL-DEDMGAP----RRRPHLPEREASKLRQKLNE 462
++I RP NRLPLV FSY PLFASLSV NIL G LL E +VA+CS HYALL P E L SLLFPFVWQG YIP+MP++M DVL+APVPFLVG+HSRYL++ + RP GVVFVDLD D ++LG DED+G+ R P LP+++A+KLR KL E
Sbjct: 901 VSIVRPAANRLPLVGFSYHPLFASLSVGNILVVLGCLLKETRVAICSQHYALLGPVCEALTSLLFPFVWQGMYIPIMPYSMLDVLDAPVPFLVGLHSRYLKDVQAPARPIGVVFVDLDYDIVHLGFEDEDLGSGSLYGRCTPALPDKDAAKLRSKLEE 1058
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: B7FQ36_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ36_PHATC) HSP 1 Score: 193 bits (491), Expect = 3.680e-54 Identity = 94/152 (61.84%), Postives = 116/152 (76.32%), Query Frame = 1
Query: 1 TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKL 456
T +I RPP N+LPL DFS++PLFA+LSV N++ G LL E +VAL S HYA+LAP AE L+SLLFPF WQG Y+PV+P+NM D+L APVPFLVG+HSRYL + + RP+GVVFVDLD D I+LG + D PR P LPER+A KL+ KL
Sbjct: 477 TWSIGRPPENQLPLADFSFQPLFAALSVSNVMVVIGCLLEEGRVALLSRHYAMLAPTAEALVSLLFPFHWQGMYLPVLPYNMIDILGAPVPFLVGLHSRYLVDVPAGSRPRGVVFVDLDRDVIHLGYEYDEVTPRSSPALPERQALKLKSKL 628
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Match: A0A7S3PAP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PAP2_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.620e-53 Identity = 89/149 (59.73%), Postives = 117/149 (78.52%), Query Frame = 1
Query: 10 ITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHYALLAPAAEGLLSLLFPFVWQGAYIPVMPFNMKDVLEAPVPFLVGIHSRYLQETSSERRPQGVVFVDLDNDSIYLGLDEDMGAPRRRPHLPEREASKLRQKL 456
I RPP N LP+ +FS+RPLFASLS+ N+L G L+ E+KVAL S HYALL P AE L+SLLFP WQG YIPVMP++M D+L++PVP+LVG+HSRYL+E S +RP GVV+VDLD+D ++LG D++ PR+ P LP+++A+KL KL
Sbjct: 480 IERPPENVLPMANFSFRPLFASLSISNVLVVIGCLMQESKVALLSRHYALLTPVAEALMSLLFPLRWQGLYIPVMPYSMLDILDSPVPYLVGLHSRYLREIPSAQRPTGVVYVDLDSDIVHLGHDDETNGPRQIPSLPDKDAAKLLLKL 628 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16446.4361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16446.4361.1 >prot_E-fasciculatus_F_contig16446.4361.1 ID=prot_E-fasciculatus_F_contig16446.4361.1|Name=mRNA_E-fasciculatus_F_contig16446.4361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp TLTITRPPRNRLPLVDFSYRPLFASLSVENILCAFGLLLTEAKVALCSSHback to top mRNA from alignment at E-fasciculatus_F_contig16446:910..2679- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16446.4361.1 ID=mRNA_E-fasciculatus_F_contig16446.4361.1|Name=mRNA_E-fasciculatus_F_contig16446.4361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1770bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16446:910..2679- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16446:910..2679- >mRNA_E-fasciculatus_F_contig16446.4361.1 ID=mRNA_E-fasciculatus_F_contig16446.4361.1|Name=mRNA_E-fasciculatus_F_contig16446.4361.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=954bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16446:910..2679- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |