mRNA_E-fasciculatus_F_contig1643.4354.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: D7FTX9_ECTSI (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX9_ECTSI) HSP 1 Score: 728 bits (1878), Expect = 8.630e-253 Identity = 532/625 (85.12%), Postives = 548/625 (87.68%), Query Frame = 2
Query: 398 GLDSESIWSELELRNVPLEKHTKKTLARLLQSEDMSLAADIASDEEDHDGEEAGDGEAEGS------------EADMQGGDSTPLMLGGKSFSDGGDEDEEEVDGEGGSXXXXXERDGEAIIGWKGAKGEKSRRETKKSSERAQNQKTEDMFFDADDMEKFADEGTMDDDDDLEDGVLDEMYGGGEGDADSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AGVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSAGKGMEGDAKDTSKRAAQLRL 2227
GLDSESIWSELELRNVPLEKHTKKTLARLLQSEDMSLAADIASDEE AEG +ADM+GGDST L+LGG S SDG D+ + EVDGE ERD A KG+K+ TK SS++A+NQKTEDMFFDADDMEKFADEGTMDDDD LEDGVLDEMYG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX GVLSAHV+ SRRMK+KISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTA+HAMTLLDMIKKRCLD NWDDVTPRDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLK+ELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAA KLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVT SVKS GKGM+GDAKDTSK+AAQLRL
Sbjct: 4 GLDSESIWSELELRNVPLEKHTKKTLARLLQSEDMSLAADIASDEE-----------AEGRXXXXXXXXXXXXDADMEGGDSTALLLGGGSVSDGDDDAKGEVDGEXXXDADGDERDTSAFKAR--GKGDKATGTTK-SSKQAKNQKTEDMFFDADDMEKFADEGTMDDDD-LEDGVLDEMYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESDGDXXXXXXXXXXXXXXXXXXXXXXTGVLSAHVQHSRRMKSKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAEHAMTLLDMIKKRCLDSNWDDVTPRDLQGPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKNELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTASVKSTGKGMDGDAKDTSKKAAQLRL 613
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: A0A835YNW6_9STRA (Mpp10 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW6_9STRA) HSP 1 Score: 315 bits (807), Expect = 9.840e-97 Identity = 175/324 (54.01%), Postives = 228/324 (70.37%), Query Frame = 2
Query: 1280 MKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQ-GPTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSAGKGMEGD-------AKDTSKRAAQLRL 2227
M+ KI + E ELL E+PWALRGEV + DRP+NSLLEA +DVERATRVAP T + +L D+I++R L+ +DDV P++++ R++AP +S DKS EGL +YEKE+LK+ +GV EDDP K LK+EL+ F++LCGKLDALCNFH+ P+A +PE+ V DV AIAMEE LP+ V+ A+ LAPEE+Y +KRGR A FLEGGAEM Q++R R+R +KK R KAR+Q EA KLVS+ NPGLGN YE+ K++ DI+GA+NV + TG++FSTS KFF LQ+ V VK A A+ S R A LRL
Sbjct: 1 MRGKIDELEAELLRERPWALRGEVAAKDRPENSLLEAALDVERATRVAPAITVEATASLEDVIRQRILEDKFDDVAPKNIELSAKPREDAPEVSMDKSTEGLAAVYEKEYLKQALGVEEDDPSKDLKEELRRDFARLCGKLDALCNFHFRPRAHLPEVAVATDVPAIAMEEALPTGVSTADGLAPEEVYARKRGRRAVFLEGGAEMDQDERNRARLAKKRSRNKARKQTEAEQKLVSRANPGLGNPYEQRKLLADIRGARNVMEGAA-DARTGKDFSTSTKFFGALQKQVAKGVKDAAXXXXXXXXXXXXXAEKRSNRGAALRL 323
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: A0A6V1QZP6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QZP6_HETAK) HSP 1 Score: 271 bits (694), Expect = 5.290e-78 Identity = 161/340 (47.35%), Postives = 226/340 (66.47%), Query Frame = 2
Query: 1253 SAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTV---RKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTG-----REFSTSAKFFSQLQESVTT-------SVKSAGKGMEGDAKDTSKRAAQLRL 2227
S H ++ +I + E+E LAEKPW ++GE + DRP+NSLLEA +DVERA R AP T + L D+IKKR L+ +DDV PR P V R E P +S +KSK GLGELYEKE+LK+ MGV ++DP K K+E+ +F KLC KLD+L NFH+TPK IP+++V+ +V AIA+EEVLP++V+ A+ALAPEE++ K +GR+ L+ EM QE+RKR+R+ KKA RRK R++ EA +LV+KLNPG+GN YEK K++ ++ +KNV + S+G +F TSAKFF++LQE + S K+ G+ M + ++A L+L
Sbjct: 167 STHQRHKEKIAEQIDELEQEALAEKPWIMKGETGAADRPENSLLEAHLDVERAFRAAPRLTEETTAALEDVIKKRILEDAFDDVVPR--TAPKVDGGRAELPEVSTEKSKAGLGELYEKEYLKQVMGVEDEDPNKAEKEEMAKIFKKLCYKLDSLSNFHFTPKPVIPDLQVKVNVPAIALEEVLPAAVSAADALAPEEVHAKAKGRKG-VLQAREEMEQEERKRARAGKKAARRKDRQRKEADKRLVAKLNPGMGNPYEKEKILESLK-SKNVVEGKNLQSSSGDPDGSSDFKTSAKFFAKLQEQTSKEFANAADSHKNRGESMGNKRRKKGSKSASLKL 502
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: K3WHQ1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHQ1_GLOUD) HSP 1 Score: 266 bits (681), Expect = 2.620e-76 Identity = 157/315 (49.84%), Postives = 210/315 (66.67%), Query Frame = 2
Query: 1244 GVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQG--PTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSAGKGME 2182
G+LS+H Q R+K +I++ E+E L EKPW L+GEV S RP+NSLLEA +D +R +VAP T + ++ L DMIKKR L+ ++DDV R G +K+ +S +KSKEGLGE+YEKE++K MG DD K ++E+ +F LC KLDAL N+ +TPK + E++V+ V AIAMEEV+P SV+DA APEE+Y+KKR R L+ EMSQE RK R++KK RRK +Q EA +LV+KLNPGLGNKY K K+M I AKNVTT E ST ++FS S +FF++LQE V ++ K E
Sbjct: 175 GILSSHQRQQLRLKKEITELEKEALGEKPWLLKGEVRSSARPENSLLEAILDYDRPGKVAPVITVEVSVALEDMIKKRILEDDFDDVI-RKFAGNEQDEKKKLEDVSMEKSKEGLGEIYEKEYMKSAMGFEMDDESKQDQEEIDVMFKSLCWKLDALSNYQFTPKPMVKELQVKPSVPAIAMEEVVPISVSDANLKAPEEIYEKKRKRGEAVLQSKEEMSQEQRKALRNAKKQTRRKENKQKEADERLVAKLNPGLGNKYAKKKLMESISNAKNVTTGKAIEGST-KQFSNSKEFFTRLQEEVKDQIQKKAKTNE 487
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: G4YNZ1_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YNZ1_PHYSP) HSP 1 Score: 261 bits (668), Expect = 2.980e-76 Identity = 149/309 (48.22%), Postives = 211/309 (68.28%), Query Frame = 2
Query: 1244 GVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTVRK-EAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSA 2167
G++S+H Q R++ +I + E+E ++EKPW L+GEV S RP+NSLLEA +D +R + AP T + ++ L +MIKKR L+ ++DDV + K + +S +KSKEGLGE+YEKE++K MG DD K ++E++ +F LC KLDAL N+H+TPK A+ E++V+ V AIAMEEV+P SV+DA APEE+Y KKR R L+ EM+Q +RK R++KK RRK +RQ E +LV+KLNPGLGNKYEK KM+ I GAKN+TT E S+ ++FS S +FFS+LQ+ V +++A
Sbjct: 33 GIMSSHQRQRLRLQKEIKELEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDFDDVIRKFAGNEQDEKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYDKKRKRGEAVLQSKEEMTQSERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRNA 340
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: A0A2D4C329_PYTIN (U3 small nucleolar ribonucleoprotein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C329_PYTIN) HSP 1 Score: 257 bits (656), Expect = 5.830e-75 Identity = 150/305 (49.18%), Postives = 205/305 (67.21%), Query Frame = 2
Query: 1250 LSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPT-VRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVK 2161
+S+H Q +R++ +I+ E E L++KPW L+GEV S RP+NSLLEA +D +R +VAP T + ++ L DMIKKR L+ ++DDV + +K+ +S +KSKEGLGE+YEKE+LK MG DD K ++E+ +F LC KLDAL N+ +TPK + E++V+ V AIAMEEV+P SV+DA APEE+Y KKR R L+ EM+QE+R R +KK RRK +RQ EA +LV+KLNPGLGNKYEK KM+ I AKN+T E ST ++FS S +FFS+LQE V T ++
Sbjct: 1 MSSHERQRQRLQKEIAQLEEEALSDKPWLLKGEVKSGARPENSLLEAVLDYDRPVKVAPVITEEVSVALEDMIKKRILEDDFDDVIRKFAPNEEDEKKKLVDVSMEKSKEGLGEIYEKEYLKTAMGFEADDESKQDQEEIDVMFRSLCWKLDALSNYQFTPKPMVKELQVKPSVPAIAMEEVVPISVSDANLRAPEEIYDKKRKRGEAVLQSKEEMTQEERNALRLAKKRSRRKEKRQQEADERLVAKLNPGLGNKYEKKKMLESIASAKNITKGKEIEGST-KQFSNSKEFFSRLQEEVQTEIR 304
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: W2QWN2_PHYPN (U3 small nucleolar ribonucleoprotein protein MPP10 n=23 Tax=Phytophthora TaxID=4783 RepID=W2QWN2_PHYPN) HSP 1 Score: 265 bits (678), Expect = 1.150e-74 Identity = 150/309 (48.54%), Postives = 214/309 (69.26%), Query Frame = 2
Query: 1244 GVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTVRK-EAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSA 2167
G++S+H Q +R++ +I D E+E ++EKPW L+GEV S RP+NSLLEA +D +R + AP T + ++ L +MIKKR L+ ++DDV + +K + +S +KSKEGLGE+YEKE++K MG DD K ++E++ +F LC KLDAL N+H+TPK A+ E++V+ V AIAMEEV+P SV+DA APEE+Y+KKR R L+ EM+Q +RK R++KK RRK +RQ E +LV+KLNPGLGNKYEK KM+ I GAKN+TT E S+ ++FS S +FF++LQ+ V ++SA
Sbjct: 288 GIMSSHQRQRQRLQKEIKDLEQEAISEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDYDDVIRKFAGNEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFTRLQDEVQEKIRSA 595
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: A0A3M6VNB8_9STRA (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNB8_9STRA) HSP 1 Score: 265 bits (676), Expect = 3.500e-74 Identity = 150/310 (48.39%), Postives = 214/310 (69.03%), Query Frame = 2
Query: 1244 GVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQG--PTVRKEAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSA 2167
G++S+H + +R++ +I + ERE ++EKPW L+GEV S RP+NSLLEA +D +R + AP T + ++ L +M+KKR L+ ++DDV R G +K+ +S +KSKEGLGE+YEKE++K MG DD K ++E+ +F LC KLDAL N+H+TPK A+ E++V+ V AIAMEEV+P SV+DA APEE+Y+KKR R L+ EM+Q +RK R++KK RRK +RQ E +LV+KLNPGLGNKYEK KM+ I GAKN+TT E S+ ++FS S +FFS+LQ+ V +++A
Sbjct: 308 GIMSSHQRRRQRLQKEIKELEREAISEKPWVLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMVKKRILEDDFDDVI-RKFAGNEEDQKKKIEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIDVMFKSLCWKLDALSNYHFTPKPAVKELQVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQNERKALRNAKKHARRKEKRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRTA 615
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: A0A7S1ZPY8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZPY8_9STRA) HSP 1 Score: 255 bits (652), Expect = 2.010e-73 Identity = 156/338 (46.15%), Postives = 218/338 (64.50%), Query Frame = 2
Query: 1253 SAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTVRK--EAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKG-----LKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQA-DVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLG--NKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKS---AGKGMEGDAKDTSKRAAQLRL 2227
S H QS++++ + ++ E+E+LAEKPW + GE RP NSLLEA + E AT++AP T +H L +MIK+R L +WDDV PR+L ++K E P +SQ+KSK GLGELYE+E+LKK G D +K LK E+K +F+ LCGKLDAL N+H+TP+ E +V+A V AIAMEEV+P V+DA APEE+Y KKRGR++ + G +EM Q +RKR R++KK+ RRKAR++ A KL+S+L PGLG N YEK KM ++ A+ T GE F+TSAKFF ++QE+V ++ GK +G D +++ L+L
Sbjct: 49 SLHSIQSKKLEEQTAEIEKEMLAEKPWQMTGETKGTARPVNSLLEAAPEFEVATKMAPTITVEHTENLEEMIKRRILAEDWDDVAPRELPDIGIKKNGELPEVSQEKSKLGLGELYEREYLKKATGYDPDAAEKQSEEDKLKGEMKMIFASLCGKLDALSNYHFTPRPVGDEAEVRAVTVPAIAMEEVMPLHVSDARGAAPEEIYGKKRGRDS-VIRGESEMDQTERKRLRNAKKSARRKARKEKLADEKLISRLQPGLGLNNPYEKRKMREELSMARASGKVTTGEIDMDANFNTSAKFFQKMQENVQDEIRGESDGGKKSKGGLSDEVLKSSALKL 385
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Match: H3GM34_PHYRM (U3 small nucleolar ribonucleoprotein protein MPP10 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM34_PHYRM) HSP 1 Score: 260 bits (665), Expect = 7.540e-73 Identity = 150/309 (48.54%), Postives = 210/309 (67.96%), Query Frame = 2
Query: 1244 GVLSAHVEQSRRMKNKISDQERELLAEKPWALRGEVHSHDRPQNSLLEATVDVERATRVAPPPTAQHAMTLLDMIKKRCLDGNWDDVTPRDLQGPTVRK-EAPHLSQDKSKEGLGELYEKEFLKKTMGVTEDDPQKGLKDELKHLFSKLCGKLDALCNFHYTPKAAIPEMKVQADVAAIAMEEVLPSSVADAEALAPEELYKKKRGREAEFLEGGAEMSQEDRKRSRSSKKAVRRKARRQAEAAHKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATGGEESTGREFSTSAKFFSQLQESVTTSVKSA 2167
G++S+H + +R++ +I E E + EKPW L+GEV S RP+NSLLEA +D +R + AP T + ++ L +MIKKR L+ ++DDV + +K + +S +KSKEGLGE+YEKE++K MG DD K ++E++ +F LC KLDAL N+H+TPK A+ E+KV+ V AIAMEEV+P SV+DA APEE+Y+KKR R L+ EM+Q +RK R++KK RRK RQ E +LV+KLNPGLGNKYEK KM+ I GAKN+TT E S+ ++FS S +FFS+LQ+ V ++SA
Sbjct: 284 GIMSSHQRRRQRLQKEIKQFEDEAINEKPWLLKGEVRSAARPENSLLEAVLDYDRPVKAAPVITEEVSIALEEMIKKRILEDDFDDVIRKFAGNEEDQKNKLEEVSMEKSKEGLGEIYEKEYMKTAMGFEADDESKQDQEEIEVMFKSLCWKLDALSNYHFTPKPAVKELKVKPAVPAIAMEEVVPISVSDANLKAPEEVYEKKRKRGEAVLQSKEEMTQTERKALRNAKKHARRKENRQREFDERLVAKLNPGLGNKYEKKKMLESIAGAKNITTGKQIEGSS-KQFSNSKEFFSRLQDEVQEKIRSA 591 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1643.4354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1643.4354.1 >prot_E-fasciculatus_F_contig1643.4354.1 ID=prot_E-fasciculatus_F_contig1643.4354.1|Name=mRNA_E-fasciculatus_F_contig1643.4354.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=713bp MAKRRRAADASLVLEGASGTGMPQPAAAAGAATTMLDLDHTTDLQQAADRback to top mRNA from alignment at E-fasciculatus_F_contig1643:6772..15989+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1643.4354.1 ID=mRNA_E-fasciculatus_F_contig1643.4354.1|Name=mRNA_E-fasciculatus_F_contig1643.4354.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1643:6772..15989+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1643:6772..15989+ >mRNA_E-fasciculatus_F_contig1643.4354.1 ID=mRNA_E-fasciculatus_F_contig1643.4354.1|Name=mRNA_E-fasciculatus_F_contig1643.4354.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4278bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1643:6772..15989+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |