mRNA_E-fasciculatus_F_contig16428.4351.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: D8LM14_ECTSI (Acetyl-CoA carboxytransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM14_ECTSI) HSP 1 Score: 368 bits (944), Expect = 1.270e-116 Identity = 192/201 (95.52%), Postives = 195/201 (97.01%), Query Frame = 1
Query: 1 RSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
RSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAP GMTTTPPAIPD VK T AAG ETAKSVLDAKGPEAMAAWVRQK+G+MVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDV YRFLNEDPWERLRQIRAAAPNICLQFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVR+AGKVAEVC
Sbjct: 546 RSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAPQGMTTTPPAIPD-VKPTEAAG-ETAKSVLDAKGPEAMAAWVRQKRGVMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVTYRFLNEDPWERLRQIRAAAPNICLQFVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRKAGKVAEVC 744
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A7S3NKJ5_9STRA (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKJ5_9STRA) HSP 1 Score: 252 bits (644), Expect = 3.440e-74 Identity = 130/222 (58.56%), Postives = 160/222 (72.07%), Query Frame = 1
Query: 1 RSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
++RP +P T P +L T+LA Q +H ER+ G APP + T P P +T A TAKS+LDA+GP+AMA WVR ++ +++TDTTMRDAHQSLLATRVRT+DLV+GAK A+ LL +AFS E WGGATFDVAYRFLNEDPW+RLRQIRAA PN+CLQ FV LAAKNG+D+FR+FDCFND+ QM+ CI+AVR+ GKVAE C
Sbjct: 553 KARPVKPDTTPCRLVTYLANQVLHSERARFMGLAPPKVPTISPQAPAVENVSTKA--ITAKSILDAQGPQAMAKWVRSQERVLLTDTTMRDAHQSLLATRVRTIDLVQGAKAANTLLCDAFSFECWGGATFDVAYRFLNEDPWDRLRQIRAACPNVCLQMLIRGANAVGYTSYPDNVVVRFVELAAKNGMDIFRIFDCFNDLNQMKTCIDAVRKTGKVAECC 772
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A7S3Y4I5_HETAK (Acetyl-CoA carboxytransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y4I5_HETAK) HSP 1 Score: 250 bits (638), Expect = 2.690e-73 Identity = 126/214 (58.88%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 25 TKPSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
T PSK+AT++AE+ I G+RS +G AP G+ P +P K T ETAK +LD++GPEA+AAWV+ +K +++TDTTMRDAHQSLLATRVR+ DL++GAKLA+ L+G+AFS EMWGGATFDVAYRFLNEDPWERLR+IR AAP++CLQ F++LAA+NG+DVFR+FDCFND++QM+V I+ VR+ GKVAEVC
Sbjct: 633 TTPSKIATYIAEKTILGDRSRLRGLAPKGVAKRSPVLPTVTK--TPRSPETAKKILDSQGPEALAAWVKNQKRVLLTDTTMRDAHQSLLATRVRSDDLIKGAKLANDLMGDAFSFEMWGGATFDVAYRFLNEDPWERLRKIREAAPDVCLQMLIRGSNAVGYASYPDNVVREFIQLAAQNGMDVFRIFDCFNDIKQMQVSIDTVRECGKVAEVC 844
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: F0XWB2_AURAN (Acetyl-CoA carboxytransferase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWB2_AURAN) HSP 1 Score: 239 bits (610), Expect = 1.560e-69 Identity = 132/218 (60.55%), Postives = 151/218 (69.27%), Query Frame = 1
Query: 13 ARPSTKPSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
A PST P KL LA Q + GERS +G AP PA P V+ A E AK+VLD GPEAMAAWVR + ++VTDTTMRDAHQSLLATRVRT+DLV GA++AS LL +AFS E WGGATFDV+YRFL EDPW+RLR +RAAAPN+C Q FVRLAA NG+DVFR+FDCFNDV QMR C++AVR AGKVAEVC
Sbjct: 578 AAPSTAPCKLVAHLAAQVVGGERSRFRGLAPVNAPLEGPAAPA-VEPPKAV--ENAKTVLDRSGPEAMAAWVRSQSRVLVTDTTMRDAHQSLLATRVRTLDLVRGARVASALLPDAFSFECWGGATFDVSYRFLKEDPWDRLRALRAAAPNVCTQMLIRGANAVGYTSYPDNVVTEFVRLAALNGMDVFRIFDCFNDVGQMRTCVDAVRAAGKVAEVC 792
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A812XSM7_SYMMI (Pyc protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSM7_SYMMI) HSP 1 Score: 210 bits (534), Expect = 3.600e-63 Identity = 117/210 (55.71%), Postives = 139/210 (66.19%), Query Frame = 1
Query: 34 SKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEV 600
SKL LAE+ + G S ++G P + T P+ P +A AKSVLD +GP A+A WVR + ++TDTTMRDAHQSLLATRVRT D+V+ A AS +L +AFSLE WGGATFDVA RFL+E PW+RLR+IRAA PNICLQ FVRLAA NGIDVFR+FDCFNDVE M+V I+AV A KVAEV
Sbjct: 42 SKLIQHLAEETMSGTWSRYRGSCPASVPTEAPSPPPRGGDMSAGAVVNAKSVLDTQGPAALALWVRDQTKTLITDTTMRDAHQSLLATRVRTEDIVKAAHCASDVLKSAFSLECWGGATFDVAMRFLDECPWKRLREIRAACPNICLQMLLRGSNAVGYTSYPDNVVAEFVRLAAVNGIDVFRIFDCFNDVESMKVSIDAVIAANKVAEV 251
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A7S4DC20_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC20_HETAK) HSP 1 Score: 205 bits (522), Expect = 3.580e-59 Identity = 103/168 (61.31%), Postives = 129/168 (76.79%), Query Frame = 1
Query: 163 AGAETAKSVLDAKGPEAMAAWVRQKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
AG AK +LD +GPEA+AAWVR ++ +++TDT+MRDAHQSLLATRVRT DLV+ A+LA+ LL +AFSLE WGGATFDV+YRFL+EDPWERLR+IR AAP++CLQ F+RLAA+NG+DVFR+FDCFND++QMRV I+ VR+ K AEVC
Sbjct: 8 AGGLNAKRLLDREGPEALAAWVRAQERVLLTDTSMRDAHQSLLATRVRTDDLVKAARLANALLPDAFSLECWGGATFDVSYRFLSEDPWERLRRIREAAPDLCLQMLLRGSNAVGYASYPDNVVKEFIRLAAQNGMDVFRIFDCFNDIDQMRVSIDTVREYNKFAEVC 175
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A0G4HNQ6_9ALVE (Acetyl-CoA carboxytransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HNQ6_9ALVE) HSP 1 Score: 198 bits (504), Expect = 1.980e-55 Identity = 112/214 (52.34%), Postives = 135/214 (63.08%), Query Frame = 1
Query: 52 LAEQAIHGERSAHKGRAPPGMTTTPPAIPD-------DVKSTTAAGAETAKSVLDAKGPEAMAAWVRQ--KKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEVC 603
LAE+ + G RS + AP + A+ D T TAK +LD GPE +A WV + K + +TDT+MRDAHQSLLATRVRTVD+V A++AS +L + FSLE WGGATFDVA RFL+E PWERLR++R A PNIC Q FVRLAAKNG+DVFR+FDCFN V+ MRVCI+AVR GKVAEVC
Sbjct: 582 LAEETVVGTRSRYLHLAPDHIHEAATALESYFQTHKFDPPPTATGEPTTAKGILDKYGPEHLAQWVMKEAKNRVFLTDTSMRDAHQSLLATRVRTVDIVNAARVASNVLKDGFSLECWGGATFDVAMRFLDECPWERLREVRKACPNICTQMLIRGANAVGYTSYPDDVVEEFVRLAAKNGMDVFRIFDCFNSVDSMRVCIDAVRATGKVAEVC 795
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A812R381_9DINO (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812R381_9DINO) HSP 1 Score: 192 bits (488), Expect = 3.480e-53 Identity = 112/214 (52.34%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 31 PSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAE-TAKSVLDAKGPEAMAAWVR--QKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEV 600
P KL TFL EQ + G+ S KG+ P P V+ AA A+ AK +LD +GPEAMA WVR K+ I++TDTT+RDAHQSL+ATR+RT D+++ A S+ L FSLE WGGATFDVAYRFLNED + RL ++RAA PNIC Q FVR AA +G+DVFR+FDCFNDVEQM+V I AVR+ KVAE+
Sbjct: 558 PPKLLTFLTEQTLKGDSSFFKGKGPKDC---PRNCYLKVEPEPAAAAQRNAKQILDEEGPEAMAKWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVEQMKVSINAVRKMNKVAEI 768
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A813D2P8_9DINO (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A813D2P8_9DINO) HSP 1 Score: 192 bits (488), Expect = 4.580e-53 Identity = 112/214 (52.34%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 31 PSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAE-TAKSVLDAKGPEAMAAWVR--QKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEV 600
P KL TFL EQ + G+ S KG+ P P V+ AA A+ AK +LD +GPEAMA WVR K+ I++TDTT+RDAHQSL+ATR+RT D+++ A S+ L FSLE WGGATFDVAYRFLNED + RL ++RAA PNIC Q FVR AA +G+DVFR+FDCFNDVEQM+V I AVR+ KVAE+
Sbjct: 702 PPKLLTFLTEQTLKGDSSFFKGKGPKDC---PRNCYLKVEPEPAAAAQRNAKQILDEEGPEAMAKWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVEQMKVSINAVRKMNKVAEI 912
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Match: A0A1Q9C6P9_SYMMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C6P9_SYMMI) HSP 1 Score: 192 bits (488), Expect = 4.700e-53 Identity = 112/214 (52.34%), Postives = 138/214 (64.49%), Query Frame = 1
Query: 31 PSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKSTTAAGAE-TAKSVLDAKGPEAMAAWVR--QKKGIMVTDTTMRDAHQSLLATRVRTVDLVEGAKLASQLLGNAFSLEMWGGATFDVAYRFLNEDPWERLRQIRAAAPNICLQ---------------------FVRLAAKNGIDVFRVFDCFNDVEQMRVCIEAVRQAGKVAEV 600
P KL TFL EQ + G+ S KG+ P P V+ AA A+ AK +LD +GPEAMA WVR K+ I++TDTT+RDAHQSL+ATR+RT D+++ A S+ L FSLE WGGATFDVAYRFLNED + RL ++RAA PNIC Q FVR AA +G+DVFR+FDCFNDVEQM+V I AVR+ KVAE+
Sbjct: 1134 PPKLLTFLTEQTLKGDSSFFKGKGPKDC---PRNCYLKVEPEPAAAAQRNAKQILDEEGPEAMAKWVRATSKERILLTDTTLRDAHQSLVATRMRTADMLKAAPEMSKHLHQYFSLECWGGATFDVAYRFLNEDAFRRLEELRAAVPNICTQMLLRGANGVGYKSYPDNVVEEFVRQAATSGMDVFRIFDCFNDVEQMKVSINAVRKMNKVAEI 1344 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16428.4351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16428.4351.1 >prot_E-fasciculatus_F_contig16428.4351.1 ID=prot_E-fasciculatus_F_contig16428.4351.1|Name=mRNA_E-fasciculatus_F_contig16428.4351.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=201bp RSRPARPSTKPSKLATFLAEQAIHGERSAHKGRAPPGMTTTPPAIPDDVKback to top mRNA from alignment at E-fasciculatus_F_contig16428:87..2415- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16428.4351.1 ID=mRNA_E-fasciculatus_F_contig16428.4351.1|Name=mRNA_E-fasciculatus_F_contig16428.4351.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2329bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16428:87..2415- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16428:87..2415- >mRNA_E-fasciculatus_F_contig16428.4351.1 ID=mRNA_E-fasciculatus_F_contig16428.4351.1|Name=mRNA_E-fasciculatus_F_contig16428.4351.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1206bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16428:87..2415- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |