mRNA_E-fasciculatus_F_contig16424.4349.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A6H5K260_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K260_9PHAE) HSP 1 Score: 295 bits (756), Expect = 1.310e-90 Identity = 263/319 (82.45%), Postives = 271/319 (84.95%), Query Frame = 1
Query: 280 MSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASAAGVSIATKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDR-------VAAPAPARGEDGGEVVDGRTSPAATTSGDDSESPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRGAKRAKCVLNPANSGGVAEVAVVGEPVMQMARPPPAAGDDGVAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEVREGV 1215
MSLLFDEDYDSHSFY+FEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRR IPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASAAGVSIATK XXXXXXXXXXXXXX XXXXXXXXXXXXXXXX S+R VAAP PARGEDGG VVDGR SPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RGAKRAKCVL+ A+ +A+ VGEPV MARP AAGD +AWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEV +
Sbjct: 1 MSLLFDEDYDSHSFYEFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRGIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALASAAGVSIATKPTAXXXXXXXXXXXXXXESXXXXXXXXXXXXXXXXISERECPEVGPVAAPGPARGEDGGGVVDGRRSPAVXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAKRAKCVLHSASGAVIADADAVGEPVTPMARPS-AAGDGDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEVEANI 312
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: D8LHN5_ECTSI (Deacetylase sirtuin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN5_ECTSI) HSP 1 Score: 219 bits (557), Expect = 5.830e-66 Identity = 121/126 (96.03%), Postives = 121/126 (96.03%), Query Frame = 1
Query: 28 KNGQGQEGADNDRXXXXXXXXXXXXXXCCPYSFDKEIRPEDFTESVRATLTLDDDDAHAAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLT 405
K GQGQEGADNDR XXXXXXXXXXX CCPYSFDKEIRPEDFTESVRATLTLDDDDAH AAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLT
Sbjct: 103 KEGQGQEGADNDREEXXXXXXXXXXX-CCPYSFDKEIRPEDFTESVRATLTLDDDDAHTAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLT 227
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S2CWY6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWY6_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.060e-27 Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 112 CPYSFDKEIRPEDFTESVRATLTLDDDDAHAAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPAL 540
CPYS I P F+ +++ L H L + L ++P CP C P +LLFDEDY H FY F++ ++W +EA+ VVFVGTSFAVTLT+LA+ EA+ R +P+F+FN+ +S P LD + G AE LP L
Sbjct: 93 CPYSEHDSIGPGSFSTALQKQL------GHNVGKNKLPK-LRQVPLCPSCSNPCMPQALLFDEDYTDHEFYQFDRLQEWLEEAEVVVFVGTSFAVTLTTLAMDEARDRHLPIFNFNIDGEDRSKPTLDWSNIEGPAEVRLPEL 228
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A1Z5JZ96_FISSO (Deacetylase sirtuin-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ96_FISSO) HSP 1 Score: 115 bits (288), Expect = 7.340e-25 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 1
Query: 112 CPYSFDKEIRPEDFT--ESVRATLTLDDDDAHAAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALA 543
CPY + + + + ES RA L + + + A G + L+ PRCP C + P +LLFDE Y SHSFYDFE AEDW ++ + +VF GTSFAV LT++A+ A+ + IPV++FN+ +L ++ L+ ++G A TLP LA
Sbjct: 258 CPYQYLESLGADQLILPESERAHLAPKNPNLSSDAPCGSLKQLSVSPRCPVCCNIAMPQALLFDEGYHSHSFYDFELAEDWLRDCEVMVFCGTSFAVNLTTVALDHARAKEIPVYNFNLHDTLVATARLNVSNIMGPAHETLPKLA 403
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S2NYC1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYC1_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.640e-24 Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 112 CPYSFDKEIRPEDFT-ESVRATL----------------TLDDDDAHAAAARGLGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPAL 540
C Y K I+P + E VR L + DD DA + +R SL E P CPGC P +LLFDE Y SHS Y FE AE+W A A+VFVGTSFAVT+T +A+ A+++ +PV++FN+S L+ + L A+ VLG A+ TL +L
Sbjct: 154 CVYEAMKNIQPSELNPEDVRRVLDPVVAHVGHHPDAPPASSDDADADDSNSR---ISLKEPPLCPGCSRPCMPQALLFDEGYHSHSHYKFETAEEWIANASALVFVGTSFAVTITDVALEFARKKGVPVYNFNLSDRLEPTSRLHAENVLGPADDTLTSL 310
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S0CDM1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDM1_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.630e-23 Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 220 LGRSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPAL 540
+ + L P CP C P SLLFDE Y SH Y FEK E W + AD +VFVGTSFAVT+T +A+ A+ +IPVF+ N++ L SS L+ + ++G++E LP L
Sbjct: 23 IQKPLKAPPLCPNCKRPCPPQSLLFDEGYHSHEHYQFEKMESWIENADVMVFVGTSFAVTITDVALEYARNENIPVFNLNLNERLNSSSRLNVENLIGKSEQILPKL 129
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S1UY41_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY41_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.330e-22 Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 226 RSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPAL 540
R +T P CP C + P++LLFDE Y SHS Y F E+W +AD VVFVGTSFAV LT++A+ K +++ V++FN +L SP LD + VLG AE TLPAL
Sbjct: 204 RQVTAPPLCPICRTPALPLALLFDEGYHSHSHYAFRDMEEWLSKADVVVFVGTSFAVWLTNVALEHCKAQNLRVYNFNTQDTLPPSPNLDVENVLGPAEETLPAL 308
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S2QVC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVC2_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.970e-20 Identity = 47/86 (54.65%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 277 PMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNV-SVSLKSSPALDAKTVLGRAEATL 531
P +L+FDE Y SH FY+F+K WF AD VFVGTSFAVT+T +AI+EA++R IPVF+FN+ S L+ S L+ + V+G++E TL
Sbjct: 44 PQALMFDESYSSHEFYEFDKFASWFTSADVFVFVGTSFAVTVTDMAIKEARKRKIPVFNFNLESGRLEPSNTLNVENVIGKSEETL 129
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: A0A7S1GMY1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMY1_CYCTE) HSP 1 Score: 94.0 bits (232), Expect = 2.220e-19 Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 226 RSLTEMPRCPGCGEASSPMSLLFDEDYDSHSFYDFEKAEDWFKEADAVVFVGTSFAVTLTSLAIREAKRRSIPVFDFNVSVSLKSSPALDAKTVLGRAEATLPALA 543
R L + P CP C P +LLFDE Y SH FY FE+ E+ + +VFVGTSFAV++T +A+ A+ IPV++FN+ L+++ L+ + V+G + TLP LA
Sbjct: 33 RKLEKPPLCPHCLRPCPPQALLFDEGYHSHDFYQFERMEECLSKCAVMVFVGTSFAVSITDVALEHAREHEIPVYNFNICDLLEATARLNVENVVGPSNQTLPRLA 138
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Match: D8LHN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN6_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.860e-19 Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 1
Query: 1042 MARPPPAAGDDGVAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEV 1203
MARPP AAGD +AWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPE
Sbjct: 1 MARPP-AAGDGDMAWGGGAEYLLEPALETPLRRDQVRVDVAEAYSRKPHPDPEA 53 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16424.4349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16424.4349.1 >prot_E-fasciculatus_F_contig16424.4349.1 ID=prot_E-fasciculatus_F_contig16424.4349.1|Name=mRNA_E-fasciculatus_F_contig16424.4349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=410bp MTLFFPQDKKNGQGQEGADNDREEGEGDDKDDDDDDCCPYSFDKEIRPEDback to top mRNA from alignment at E-fasciculatus_F_contig16424:119..2375+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16424.4349.1 ID=mRNA_E-fasciculatus_F_contig16424.4349.1|Name=mRNA_E-fasciculatus_F_contig16424.4349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2257bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16424:119..2375+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16424:119..2375+ >mRNA_E-fasciculatus_F_contig16424.4349.1 ID=mRNA_E-fasciculatus_F_contig16424.4349.1|Name=mRNA_E-fasciculatus_F_contig16424.4349.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2460bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16424:119..2375+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |