mRNA_E-fasciculatus_F_contig1640.4332.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: D8LJJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ7_ECTSI) HSP 1 Score: 701 bits (1808), Expect = 6.810e-247 Identity = 398/475 (83.79%), Postives = 410/475 (86.32%), Query Frame = 1
Query: 1 MTGRRRTRVRRAWLPMTLAAAFLRRGHSGALAHSTAGGARTAVQDHAAGRRFDERVGPTGGSSGITDDTSSGSTSLLQKYTFRETVRTVIEEDQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRLMGLSAEDMATVKQHAEVLRVERDVTEERLHPLLQKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPSLSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVA---NASEASFEFLSATFGATLPRGHVSVVPSVPEDACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVAVLVKRGACSFGVKAKNVQ 1416
MTGRRRTRV RAWLPMT+AAAFL RG SG L HST GG R AVQDHA GR FDER GGS G SS S SLL+KYTFRETVRTVIEEDQLPELPDFL++IGLGD+LEDFYRKSVFETKYIFTLNDMDLRLMGLS D+ATVKQHAE LRVERDVTEERLHPLLQ+RNELTYGRLFLDRSASSFEFYLAGFGPP PVDEA LIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPSLSK+LEW ANG GGPV RLVALDC+PGRAACEAVLPEEQQA+KQVDSG ITIV LPAS P+ A V+ A G A NAS ASFEFLSATFGATLPRGHVSVVPSVPEDAC PIA XXXXXXXXXXXXXXXX GVAPVAVLVKRGACSFGVKAKNVQ
Sbjct: 1 MTGRRRTRVHRAWLPMTVAAAFLHRGQSGDLEHSTTGGGRAAVQDHAVGRPFDERADQPGGSPGSAAGRSSESASLLEKYTFRETVRTVIEEDQLPELPDFLEEIGLGDKLEDFYRKSVFETKYIFTLNDMDLRLMGLSPADIATVKQHAEELRVERDVTEERLHPLLQRRNELTYGRLFLDRSASSFEFYLAGFGPPVPVDEASLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPSLSKALEWTANGDGGPVTTRLVALDCKPGRAACEAVLPEEQQAEKQVDSGKITIVSGLPASPPSSAAQG-VDAAKGAALSANASGASFEFLSATFGATLPRGHVSVVPSVPEDACQPIAXXXXXXXXXXXXXXXXXXXXXXXXXXX------GVAPVAVLVKRGACSFGVKAKNVQ 468
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A7S2SG82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG82_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.010e-39 Identity = 118/396 (29.80%), Postives = 182/396 (45.96%), Query Frame = 1
Query: 250 ETVRTVIEEDQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRLM----GLSAEDMATVKQHAEVLRVERDVTEERLHPLLQKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGE---EPKGPENMPTVLVRGSALPSLSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEFLSATFGATLPRGHVSVVPSVPEDACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVAVLVKRGACSFGVKAKNVQ 1416
ET + ED LP + L+++ + D FY ET+Y+ + DMD R+M G+ + + V+ + ++ER V + PLL++RN L YGRL ++ S +SFE++ F P P L A ++ SE G V+A RG CSFV+KA +++S A A++++NN +LF +A+ G +GGG + + P N+ V+V+ A +L K++ GA+ R+V L C G C+ +LP+E+ +VDSG + V S+ EFL+ T+G +P G V V + P D C + +V GR VLV+RG CSFG K K Q
Sbjct: 47 ETQEMELVEDGLPTIDALLEELDMSDLTAKFYEAGFTETRYVLRMKDMDFRMMALEWGVEKDAILRVRDAIKNYKIERPVVKIEEDPLLKERNALRYGRLVINGSTASFEYFSGYFSAPMPRKSLSLALAWDNNSHACDLKSESAAGEAVIAHRGGCSFVEKAWNISASGAQAMILVNNA---SNLFHIAS--GYATGGGNLNNDTEAPSNLTVVMVKHYAFSALRKAIAVGAD-------VRMVPLKCTSGDVKCQPILPDEKDIVLEVDSGVVEQV------------------------GSDIQHEFLTGTWGGIIPAGDVPTVAADPIDGCSALQ----------------------NSVSDVTGR-------VVLVRRGRCSFGDKVKAAQ 377
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A7S2UVF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF2_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.580e-39 Identity = 106/301 (35.22%), Postives = 159/301 (52.82%), Query Frame = 1
Query: 262 TVIEEDQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRLMGLSAEDMATVKQHAEVLRVERDVTEERLHPLLQKRNELTYGRLFLDRSASSFEFYLAGFG--------PPAPVDEAKLIWAEPRDACGTLTNSELLP-GTIVLAERGRCSFVDKANTV-ASSNALALVVINNGPEGEDLFRVAATLGGR---SGGGEEPKGPENMPTVLVRGSALPSLSKSLEWG----------------------ANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITI 1059
T IE++ LP L D L+D+ + ++ ETKYI + DMD+R++ S +++ VK LRV + ++ PL +KR L YGRLF+DR SFEF A FG PP PV +++AEP +ACG L E +P G +V+A RG C+F++KA V ASS A A++++++ E+L VA+T G GG + K P+N+ ++R SALP L +SLEW G + +V L+C+ GR C VL E++ V++GT++I
Sbjct: 49 TYIEDEHLPPLQDLLQDLRMTHHYDNLINSGYDETKYIMKMKDMDMRVLDFSKDEIQRVKDAIADLRVVKVKEVKQEDPLQKKRAALKYGRLFVDRFPQSFEFIPASFGAAMPIPQQPPGPVGRP-IVFAEPFEACGPL--QEGIPVGALVVAGRGTCTFLEKAQNVSASSLASAMLLVSHD---EELIAVASTHGTSVRVEEGGVDLKVPQNLAVAMIRASALPLLKQSLEWANEDQAAVELAAKQAKKTSVVQKKGDAPGGLRGNMVPLECKAGRTDCLPVLEAEKKLAPHVEAGTLSI 343
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A7S1UBI5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBI5_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.930e-29 Identity = 123/396 (31.06%), Postives = 173/396 (43.69%), Query Frame = 1
Query: 259 RTVIEEDQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRLMG----LSAEDMATVKQHAEVLRVERDVTEERLHPLLQKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMP--TVLVRGSALPSLSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEFLSATFGATLPRGHVSVV-PSVPEDACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVA---VLVKRGACSFGVKAKNVQ 1416
+ V+ D LPE DFLKD GL D F + V +Y L DL + G L + + + + E L V + + EE PLL+ RN L G+L L ++++FY A FG P+ E + EP + C T N L I + RG CSF+DKAN V+ + AL+ +N+ + LFRV+A G + E+P + LV A L +L+ V +LV + C+ G A C +LPEE++ VDSG + AGD E+ EFL++TFG LP + ++ PS P+ AP GG V+ A VLV RG C FG KAK+ Q
Sbjct: 90 KEVLVTDHLPEFEDFLKDEGLEDLYPKFLDQGVHNMQYFLRLKKNDLSIWGMDWGLKLDQIRYLMKRIEELTVIKIIEEEEEDPLLKLRNSLHNGKLSLRHGVANYQFYKAFFGGHLPMKELPVKLVEPLNGCSTPENLAELKDAIAVVSRGDCSFIDKANNVSLAGPGALLYLNSDNQ---LFRVSA--GHITNSKEDPNENTGIEFGVGLVTHEATGVLKAALDAQEE-----VFGQLVPVQCK-GAAECAPILPEEKEVVPYVDSGYL-------------AGDGLDEI------------EFLTSTFGMPLPTQALPLLQPSNPQGCEALSAP-----------------------------EGGDVSDFAGAWVLVARGGCPFGDKAKHAQ 420
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A482SVK7_9ARCH (PA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVK7_9ARCH) HSP 1 Score: 108 bits (269), Expect = 1.570e-21 Identity = 107/388 (27.58%), Postives = 173/388 (44.59%), Query Frame = 1
Query: 277 DQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRLMGL-----SAEDMATVKQHAEVLRVERDVTEERLHPLLQKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEP--KGPENMPTVLVRGSALPSLSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEFLSATFGATLPRGH-VSVVPSVPEDACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVAVLVKRGACSFGVKAKNVQ 1416
D LP L + L+++ + L+DF R + ET+ + L+ MD +LM + S E ++ +K L VTE++ P ++ RN+LTYG++ L +FE+ LA FG P+ L + C +++ G V+A RG C+F+ KA T A L++IN+ ED A+ G G E K ++ + + + +LS+++++ N + A +V + C+ G C +L EE++ Q +V G + + +PAS G AK SF+FL++ GA LP G + + + P DAC A L V+S VA+L RG C F K Q
Sbjct: 92 DVLPPLQEVLEEMQITPFLKDFVRMGITETRLLLRLSSMDFQLMTMEWTNFSYEHVSKLKSKIVDLTKMATVTEDKNRPEIEMRNKLTYGKVILPHGVQAFEYSLASFGTSPPIGPVHLRLSADGLECDKEHSADYT-GHFVVARRGNCTFLSKAQTAFQHGAQGLIIINS----EDKLDSPASGLGIDGNITEAMVKALDSFVVLGMSNTTWEALSRAVQYAEN----HLPAHIVPIKCQTG-GRCLPLLDEEKKLQTEVSWGRMRV--RMPAS-----GQAK-------------SFDFLTSIIGAPLPVGQDLPLFLADPIDAC---AALPNVTSS---------------------------GSVALLAHRGQCRFDTKVLGAQ 419
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A8J2SEN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEN6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.130e-14 Identity = 101/375 (26.93%), Postives = 149/375 (39.73%), Query Frame = 1
Query: 268 IEEDQLPELPDFLKDIGLGDRLEDFYRKSVFETKYIFTLNDMDLRL----MGLSAEDMATVKQHAEVLRVERDV--TEERLHPLL---QKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVD-EAKLIWAEPRDACGTLT--NSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPSLSKS-----LEWGANGVG----------------------------GP------VMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEFLSATFGATLPRGHVSVVPSVPEDACHP 1239
+++ +LP L + L ++ L + + V T+ + D+ + +G + + + +R E V T E + PL +RN LTYGR+F DR+ +SFEF A FG P L+ A P D C L N+ + G+ VLA+RG CSFV+KA ++ A L+VIN+ D G + E P+ + LV A P L+++ ++ G V GP R V L C GR C +L E+ DSGT+ I E SFEF+SA +G LP V+VV + E C P
Sbjct: 71 LDDARLPPLNEVLDELELD--AAELLARGVETTRQLCAWGRSDISIHGNDLGWDRDKQKVINEKINAIRAEAAVQKTTETVDPLKAARDERNALTYGRVFADRATASFEFKKAWFGADFPEALSMPLVRALPLDGCDELLWQNTSIYKGSAVLADRGGCSFVEKAWAAHNAGAKLLLVINSPDRPFDR-----PTSGYATDAEPTPSPDTLAVGLVHQDAGPGLARAASSAWVDQGPQAVELLQIRAPWRVFMEKYGLISKKVVVDARQGPWDSYDATTIRAVPLKCVSGRPDCAPILESEKTILPDTDSGTLHIAGE--------------------------SFEFVSAAWGGVLPDRPVAVVTA--EYLCSP 410
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A812RLD8_SYMMI (SPPL2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RLD8_SYMMI) HSP 1 Score: 75.1 bits (183), Expect = 2.760e-12 Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 502 LQKRNELTYGRLFLDRSASSFEFYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGT-IVLAERGRCSFVDKANTVASSNALALVVINNGP 780
++ R+ +GRL++D + +F+ A FG AP + ++AEPRDACG L N+ LL +VL RG+C++ KA V + A A+++INN P
Sbjct: 14 MKLRSTRFWGRLYIDGWPQTIQFFRAHFGIEAPYGRKRFVFAEPRDACGDLQNAHLLTSDHVVLVNRGKCTYGQKALNVKKTAASAVIIINNEP 107
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A7S1UDY4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDY4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 7.060e-11 Identity = 86/289 (29.76%), Postives = 119/289 (41.18%), Query Frame = 1
Query: 568 FYLAGFGPPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMP--TVLVRGSALPSLSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEFLSATFGATLPRGHVSVV-PSVPEDACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVA---VLVKRGACSFGVKAKNVQ 1416
FY A +G P + EP + C T N L I + RG CSF+DKAN V+ + AL+ +N+ + LFRV+A G + E+P + LV A L +L+ V +LV + C+ G A C +LPEE++ VDSG + AGD E+ EFL++TFG LP + ++ PS P+ AP GG V+ A VLV RG C FG KAK+ Q
Sbjct: 1 FYRAFWGDLLPRRGRPVKLVEPLNGCSTPENLAELKDAIAVVSRGDCSFIDKANNVSLAGPGALLYLNSDNQ---LFRVSA--GHITNSKEDPNENTGIEFGVGLVTHEATGVLKAALDAQEE-----VFGQLVPVQCK-GAAECAPILPEEKEVVPYVDSGYL-------------AGDGLDEI------------EFLTSTFGMPLPTQALPLLQPSNPQGCEALSAP-----------------------------EGGDVSDFAGAWVLVARGGCPFGDKAKHAQ 224
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A662XXR0_9STRA (Dynactin subunit 6 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXR0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.390e-8 Identity = 77/261 (29.50%), Postives = 110/261 (42.15%), Query Frame = 1
Query: 661 SELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPS-----------LSKSLEWGANGVGGPVMARLVALDCRPGRAACEAVLPEEQQAQKQVDSGTITIVPELPASSPNGAGDAKVEVAAGVANASEASFEF--LSATFGATLPRGHVSVVPSVPED-ACHPIAPLAAVSSXXXXXXXXXXXXXXXXNVGGDEGRGGGVAPVAVLVKRGACSFGVK 1401
S+ + GT+ LA RG CSF+DKAN ++N ALVV+NN +G+ F+ A S G + + P+ +PT + + L + LS+ +NG D R G +A L +E+++ + + I LPA GAG + S ASFEF L A FG +P VV + P++ ACH +G G VLVKRG CSFG+K
Sbjct: 608 SDEVEGTVFLAYRGSCSFIDKANNARTANGKALVVVNN-VKGDGRFKPTAA----STGEHKLERPDQVPTPVTEPARLTNQELVIARVSFTLSEVPRLASNGE-----------DLRGGMSA----LQDEKKSSRVMTFWHINASSSLPA---KGAGTGQPS--------SSASFEFRVLPALFGGKIPTMPFRVVAAFPQETACH------------------------------RQGLGILATRAVVLVKRGGCSFGMK 807
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Match: A0A1I8A4L4_9BILA (PA domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A4L4_9BILA) HSP 1 Score: 53.9 bits (128), Expect = 8.940e-5 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1
Query: 589 PPAPVDEAKLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGED 792
PP P +A ++ A+P AC L N + G++VL ERG+CSFVDKA + A A V++++ G D
Sbjct: 57 PPYPTKDAIMVLADPSHACTPLKNVVDVYGSVVLIERGKCSFVDKAINAERAGA-AFVIVSDTVNGTD 123 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1640.4332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1640.4332.1 >prot_E-fasciculatus_F_contig1640.4332.1 ID=prot_E-fasciculatus_F_contig1640.4332.1|Name=mRNA_E-fasciculatus_F_contig1640.4332.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=472bp MTGRRRTRVRRAWLPMTLAAAFLRRGHSGALAHSTAGGARTAVQDHAAGRback to top mRNA from alignment at E-fasciculatus_F_contig1640:14..4249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1640.4332.1 ID=mRNA_E-fasciculatus_F_contig1640.4332.1|Name=mRNA_E-fasciculatus_F_contig1640.4332.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4236bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1640:14..4249- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1640:14..4249- >mRNA_E-fasciculatus_F_contig1640.4332.1 ID=mRNA_E-fasciculatus_F_contig1640.4332.1|Name=mRNA_E-fasciculatus_F_contig1640.4332.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2832bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1640:14..4249- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |