mRNA_E-fasciculatus_F_contig164.4330.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI) HSP 1 Score: 886 bits (2290), Expect = 0.000e+0 Identity = 481/549 (87.61%), Postives = 491/549 (89.44%), Query Frame = 2
Query: 68 ALLARDTRPMSTFEGTT-GTKTTXXXXXXIHGEGSTGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGA-REGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKR--KGGEVLDQWQHCANVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLAEGEGKEEAGSAGEDPATAEPSSEIEVMPPSTASPGSTADRTAFLRDKI----GGGTAVDKKGSGGQGGRGGAKEEAVEEFVGEEGGDAMIEMLSAFDDDSGDDE 1690
ALL+ DTRPMSTFEG T GTKTT HGE +TGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDE+C+P MRDLCLQLL NVTRVQVGATKLAQVGVAGGA REGQYIRRLARWLAKHPAD GLPYPVLVGGSRDDARVVDRRAALRDTQAD XXXX KR KGGEVLDQWQHCA+VLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWG+AGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKE +E+ S EDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLA+ EGKE AGSAGEDPAT EPSSEIEVMPPSTASPGSTADRTAFLRDK+ G VEEFVGEEGGDAMIEMLSAFDDDSGDDE
Sbjct: 17 ALLSLDTRPMSTFEGATAGTKTTGEQTEGNHGERNTGSITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQADDXXXXEGRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGVAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKE-KEEGSYEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPATTEPSSEIEVMPPSTASPGSTADRTAFLRDKLVVENGXXXXXXXXXXXXXXXXXXXXXXXVEEFVGEEGGDAMIEMLSAFDDDSGDDE 564
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: A0A835YVT2_9STRA (DUF383 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT2_9STRA) HSP 1 Score: 228 bits (580), Expect = 5.440e-63 Identity = 162/393 (41.22%), Postives = 215/393 (54.71%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDE--ECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVLDQWQHCANVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAP-----RRREPVQCIKRDIVEALLQLCAILESRQSLRKC-----GVYFVIREMDKSEPDAEISQVCYNLVNFL 1336
+ E VPFLRD RP++R+AAA T + +AT+EG +L++ GAV WLC++ GDV I KD+++ L+N A+ AA E M +GIVN +ME V D+ +C P RDLCL LL NVT + G ++ Q+G GG EG ++RRLAR L XXXXXXXXXXXX +DQWQH A++LCN R GR+ L R D V L ++LPQL SA RR GI+GC+RN CF+ HP LL +V+PH+L LA +D Y F++KV LDP VWR +PA REP + +++EAL LCA ES +LRK G Y V+RE + E D + C+ + L
Sbjct: 8 VAEIVPFLRDSRPDLRKAAANTCMQLAATEEGRLMLYEAGAVPWLCKLVGDVDAIAKDSITALINTGADVP--AATEQMVNSGIVNSVMEVVVDQSQDCTPRRRDLCLTLLANVTTTEPGVERMLQLGGKGGP-EGLHVRRLARALV----------------------------TTLXXXXXXXXXXXXXXXXXXXXXXXGVDQWQHAASLLCNVTREETGRQILARADTGV-LEDLLPQLRSAVAARRRGISGCIRNLCFDAKLHPRLLDGARVLPHVLRGLASSRDAYSFQDKVALDPMVWR-----------APAGEGAMTFHEREPDAETRGNLLEALQLLCAHPESCAALRKQATLLQGTYCVVRETARRETDERLLVACHAIATAL 357
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: W4FY03_9STRA (Protein HGH1 homolog n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FY03_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.710e-34 Identity = 127/407 (31.20%), Postives = 183/407 (44.96%), Query Frame = 2
Query: 176 SITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVLDQWQHCANVLCNAARIPEGRRALRR-------PDPLVALTEVL-PQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLA-----DDKDEYDFEEKV--ILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1351
S+++E + E V FL +PR ++RQ+A V + T G+ L K AVK LCR+ GD+ I +DA+ LVN++A T A E+ K IVNR+M + + +DL + LL NVT GA L RE R+L P G+ P DD +Q+ ANVL N ++ EGR L R P + +L VL PQ+ SAN +RR GI +RN CF+ +H +L + +V HL RLA +D D+ + +L P+ R+ D + +++DIVE LL LC+ R LR+ VY +IR E D ++S+ Y LV+FL RDE+
Sbjct: 2 SVSKE-VTELVEFLSNPRADVRQSAIQLTVGLTGTDSGIQQLIKADAVKALCRLIGDMNAIARDAIHALVNITA--THHGACENALKHDIVNRLMNQLDSDF---QHKDLSVMLLANVTTTPEGAKALVINDAKYSVREVILQNLTVRFLESEPEPDGID-PTTNEPKWDD-------------------------------------DYQYVANVLANITQLEEGRAFLLRLRTKQGQPGQVQSLVHVLLPQVHSANVIRRRGIIQALRNLCFDSDNHFFLYDTLDIVVHLQRRLAGPEPLEDADKVGMSSSILAVLGPKKKRETDAQ-------------------VRKDIVECLLLLCSSRNGRNILRQKKVYPIIRNAHLVEADEDVSEQIYKLVDFLIRDEE 345
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: A0A2P4WXK1_9STRA (Protein HGH1 homolog (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXK1_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.420e-31 Identity = 115/396 (29.04%), Postives = 189/396 (47.73%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRD----TQADXXXXXXXXXXXXKRKGGEVL--DQWQHCANVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1351
+EE V FL PRPE+R++A++ + +A+ +G+ L K ++ LCR+ D+ I +DA+ L+N++A + AA E K ++NR+M V D+E + D + LL NVT GA L L Y D + D ALR+ T + GE D++Q+ AN+L N +++ +GR L + +L +LPQL S N VRR G+ ++N CF+ +H +L ++ + H+++ LA +E D ++K+ ++P V+ + D+ ++RE + ++ V+ LL LC R+ LR+ VY +IR+ EPD EI Y LV+FL RDE+
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLKKLDVMQALCRVVSDMRPIAEDAIKALINLTA--ANPAACERALKYDLLNRVMTQVEDDEWR--LTDYSMMLLANVTTTPEGAKAL------------------------------LGY---------DDKSTDASLALREKKIRTLTNSFLEGEPEPDGVDSATGEPKWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDSDNHFYLYDQLDIPTHMMVLLAGP-EELDEDDKMGMNPVVYSQGDK------------KKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRDAHLVEPDEEIGDQIYKLVDFLIRDEE 352
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: K3WKR7_GLOUD (Protein HGH1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKR7_GLOUD) HSP 1 Score: 138 bits (348), Expect = 3.050e-31 Identity = 118/409 (28.85%), Postives = 192/409 (46.94%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRD----TQADXXXXXXXXXXXXKRKGGEVL--DQWQHCANVLCNAARIPEGRR-ALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLA 1390
+EE V FL PRPE+R++A++ V +A+ +G+ L K ++ LCR+ D+ I +DA+ L+N++A + AA E K ++NR+M + D+E ++D + LL NV+ GA L + Y DA+ D ALR+ T ++ G+ D++Q+ AN+L N +++ EGR L+ + E+LPQL S N VRR GIA VRN CF+ +H + L++ +P + L + D ++KV L P V+R ++ ++RE + ++ V+ LL LC R LR+ VY ++R EP+ EI Y LV+FL RDE ++ + ++S A
Sbjct: 15 VEELVSFLSHPRPELRKSASSLLVNMTASDQGIHQLMQLAKFDVIQALCRVVSDMRPIAEDAIKALINITA--ANPAACERTLKFDLLNRVMTQIDDDEWR--LKDYSMMLLANVSTTPEGARAL------------------------------MGY---------DAKSTDALLALREKKMRTLTTLFLESEAEPEGIDQETGDAKWDDEYQYVANILANISQLAEGRDFLLKNRGNTTLIAELLPQLRSPNVVRRRGIASVVRNLCFDTDNH-FFLYDQLDIPSKMNYLLAGPEPLDEDDKVGLHPSVYRLGEK------------KKREKDKQVRLYAVDCLLLLCTTRNGRNDLRRKKVYPIVRNAHLVEPEEEIGDQIYKLVDFLIRDEDGEEPDWNEIRSKA 367
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: G4YZ65_PHYSP (Protein HGH1 homolog n=17 Tax=Phytophthora TaxID=4783 RepID=G4YZ65_PHYSP) HSP 1 Score: 138 bits (348), Expect = 3.230e-31 Identity = 117/395 (29.62%), Postives = 189/395 (47.85%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREG------QYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVLDQWQHCANVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDE 1348
+EE V FL PRPE+R++A++ + +A+ +G+ L K V+ LCR+ D+ I +DA+ L+N++A A E K ++NR+M V DEE + D + LL NVT GA L +G + G + IR+L + G P P V S + + D++Q+ AN+L N +++ +GR L + +L +LPQL S N VRR G+ ++N CF+ +H +L ++ V H+++ LA +E D ++K+ ++P V+ + D+ ++RE + ++ V+ LL LC R+ LR+ VY +IR EPD EI Y LV+FL RDE
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLKKFDVVQALCRVVSDMRPIAEDAIKALINLTAANPG--ACERALKYDLLNRVMTQVEDEEWR--LTDYSMMLLANVTTTPEGAKAL--LGYDEKSTHGTIAVRERKIRKLTNSFLE-----GEPEPDGVDSSSGEPK--------------------------------WDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDTDNHFYLYDQLDVPTHMMVLLAGP-EELDEDDKIGMNPVVYSQGDK------------KKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRNAHLEEPDEEIGDQIYKLVDFLIRDE 351
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: A0A662XPP2_9STRA (Protein HGH1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPP2_9STRA) HSP 1 Score: 137 bits (345), Expect = 7.380e-31 Identity = 119/395 (30.13%), Postives = 190/395 (48.10%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKL----AQVGVAGGAREGQYIRRLAR-WLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVLDQWQHCANVLCNAARIPEGRRALRRPDPLVALTEVL-PQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1351
+EE V FL PRPE+R++A++ ++ +A+ + V L K V+ LCR+ D+ I +DA+ L+N++A + A E K ++NR+M V D E + D + LL NVT GA +L A+ A A + IR L +L P +G+ AA D + D D++Q+ AN+L N +++ +GR L + +L L PQL S N VRR G+A ++N CF+ +H +L ++ V +++ LA + D E+K+ + P V+ + D+ ++RE + ++ V+ LL LC R+ LR+ VY +IR EPD EI Y LV+FL RDE+
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLISMTASDQSVFQLLALPKLDVVQALCRVVSDMRPIAEDAIKALINLTAANPT--ACERALKYDLLNRVMTQVEDSEWR--LTDYSMMLLANVTTTPEGAMELLGYDAKATDATLALREKKIRTLTNAFLESEPEPEGVD------------------AATGDAKWD--------------------DEYQYVANILANVSQLEQGRAFLLKMRQDTSLVGALMPQLKSPNVVRRRGVAAALKNLCFDSDNHFYLYDQLDVPTNMMCLLAGPEP-LDEEDKLGMSPVVFSQGDK------------KKREQDRQVRLAAVDCLLLLCTTRNGRKDLRRKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEE 352
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: A0A8K1CI53_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI53_PYTOL) HSP 1 Score: 136 bits (342), Expect = 1.180e-30 Identity = 120/403 (29.78%), Postives = 191/403 (47.39%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV-ALLH--KCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVLDQWQHCANVLCNAARIPEGRRALRRPDPLVALTE-VLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLA 1390
+E+ V FL PRPE+R++A++ V SA+ + V LLH K ++ LCR+ D+ I +DA+ L+N++A A E K ++NR+M + D+E +++L + LL NVT + GA L GA Y + R L + P P V +A+ D++Q+ A +L N +++ EGR+ + + L E +LPQL S N VRR GI ++N CF+ H +LL++ +P LM L + D EEK+ + P V++ ++RE + ++ V+ALL L R +LR+ VY +IR EPD EI Y LV+FL RDE+ ++ D +++ A
Sbjct: 7 LEDLVGFLSSPRPELRKSASSMLVNLSASDQAVYQLLHLQKNDVIQGLCRVVSDLRPIAEDAIKALINLTAIHPD--ASERTIKFDLLNRVMTQLEDDEWR--LKNLSMMLLANVTTTEAGARALIGADTQAGAATAAYREKKIRTLTVSFMESE-PEPDGVDADSGEAK--------------------------------WDDEYQYVAVILGNISQLEEGRQFILKVRNGKTLIEALLPQLRSPNLVRRRGITALIKNLCFDTDSH-FLLYDHLDIPSKLMYLLAGPEPLDPEEKIGMHPDVYKL------------GPKKKREHDRFVRLACVDALLLLGTSRNGRNNLRQKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWDKIRTEA 359
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: A0A5D6XXP2_9STRA (Protein HGH1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXP2_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.890e-30 Identity = 118/427 (27.63%), Postives = 198/427 (46.37%), Query Frame = 2
Query: 185 RELIEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVL--DQWQHCANVLCNAARIPEGRR-ALRRPDPLVALTEVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLAEGEGKEEAGSAGEDPATAE 1447
R +EE V FL PRPE+R++A++ + +A+ +G+ L K V+ LCR+ D+ I +DA+ L+N++A + AA E ++NR+M + D++ ++D + LL NVT GA L + Y G DDA + R +R T G+ D++Q+ AN+L N +++ +GR L+ + E++PQL S N VRR GIA VRN CF+ +H + L++ VP + L + +D +++ + P ++R D+ ++RE + ++ V+ LL LC R LR+ VY V+R EPD E+ Y LV+FL RDE+ ++ + +++ A + + G + TAE
Sbjct: 12 RTSVEELVGFLSHPRPELRKSASSLLINMTASDQGMHQLLQLQKLDVVQALCRVVSDMRPIAEDAIKALINLTA--ANPAAAERALTFDLLNRVMTQIEDDDWR--LKDYSMMLLANVTTTPEGARAL------------------------------MGYD----GRTDDALLALREKKMR-TLTSLFLESEPEPEGVDADTGDAKWDDEYQYVANILANISQLEQGRDFLLKNRGGTTLVAELVPQLRSPNVVRRRGIAAAVRNLCFDTDNH-FFLYDQLDVPSKMSYLLAGPEPFDADDRAGMHPSLYRLGDK------------KKREQDKQVRLAAVDCLLLLCTTRNGRNDLRRKKVYPVVRNAHLVEPDEEVGDQIYKLVDFLIRDEEGEEPDWNDVRAKAFADDADAVGGEAAESVTAE 386
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Match: H3GFD9_PHYRM (Protein HGH1 homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFD9_PHYRM) HSP 1 Score: 135 bits (341), Expect = 2.370e-30 Identity = 115/403 (28.54%), Postives = 191/403 (47.39%), Query Frame = 2
Query: 194 IEETVPFLRDPRPEIRQAAAATAVAASATKEGV---ALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEECLPVMRDLCLQLLGNVTRVQVGATKLAQVGVAGGAREGQYIRRLARWLAKHPADKGLPYPVLVGGSRDDARVVDRRAALRDTQADXXXXXXXXXXXXKRKGGEVL--DQWQHCANVLCNAARIPEGRRALRRPDPLVALT-EVLPQLASANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEDQEQDSSEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKS 1384
+EE V FL PRPE+R++A++ + +A+ +G+ L+K V+ LCR+ D+ I +DA+ L+N++A A E K ++NR+M V D+E + D + LL NVT GA + L + KH DA + R +R T + GE D++Q+ AN+L N +++ +GR L + +L +L QL S N VRR G+ ++N CF+ +H +L ++ + H++ LA +E D ++K+ ++P V+ S ++RE + ++ V+ LL LC R+ LR+ VY +IRE EPD EI Y LV+FL RDE+ ++ D +++
Sbjct: 13 MEELVSFLSHPRPELRKSASSLLINMTASDQGMFQLLQLNKFDVVQALCRVVSDMRPIAEDAIKSLINLTAANPG--ACERTLKYDLLNRVMTQVEDDEWR--LTDYSMMLLANVTTTPEGA------------------KALLGYDEKHT----------------DASIALREKKIR-TLTNSFLQGEPEPDGVDSTTGEPKWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLTQLKSPNAVRRRGVTAALKNLCFDTDNHFYLYDQLDIPTHMMYLLAGP-EELDEDDKMGMNPIVY------------SQGNKKKREKDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIREAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWDEVRT 363 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig164.4330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig164.4330.1 >prot_E-fasciculatus_F_contig164.4330.1 ID=prot_E-fasciculatus_F_contig164.4330.1|Name=mRNA_E-fasciculatus_F_contig164.4330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=534bp MSTFEGTTGTKTTGEETEGIHGEGSTGSITRELIEETVPFLRDPRPEIRQback to top mRNA from alignment at E-fasciculatus_F_contig164:19554..29223- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig164.4330.1 ID=mRNA_E-fasciculatus_F_contig164.4330.1|Name=mRNA_E-fasciculatus_F_contig164.4330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=9670bp|location=Sequence derived from alignment at E-fasciculatus_F_contig164:19554..29223- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig164:19554..29223- >mRNA_E-fasciculatus_F_contig164.4330.1 ID=mRNA_E-fasciculatus_F_contig164.4330.1|Name=mRNA_E-fasciculatus_F_contig164.4330.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3204bp|location=Sequence derived from alignment at E-fasciculatus_F_contig164:19554..29223- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |