mRNA_E-fasciculatus_F_contig16382.4323.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A6H5L1N8_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N8_9PHAE) HSP 1 Score: 199 bits (507), Expect = 3.120e-59 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 1
Query: 1 ITWFATMTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTLQ 285
ITWFATMTTYFTFITVICMGHLRDFLGKV RRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRP+CSSP AHIEV+ERESKDGMKTLQ
Sbjct: 121 ITWFATMTTYFTFITVICMGHLRDFLGKVFRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPVCSSPGAHIEVIERESKDGMKTLQ 215
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: D8LL73_ECTSI (Serine palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL73_ECTSI) HSP 1 Score: 185 bits (469), Expect = 1.160e-54 Identity = 83/89 (93.26%), Postives = 86/89 (96.63%), Query Frame = 1
Query: 19 MTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTLQ 285
MTTYFTFI VICMGHLRDF+GKV RRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRP+CSSP AHIEV+ERESKDGMKTLQ
Sbjct: 1 MTTYFTFIAVICMGHLRDFVGKVFRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPVCSSPGAHIEVIERESKDGMKTLQ 89
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A4D9D892_9STRA (Aminotran_1_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D892_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.250e-29 Identity = 54/94 (57.45%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 1 ITWFATMTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTL 282
ITWFA +TTYF + +I GH+RDF G++ SRYL GYAPL K +ENF+TRRLYHRI+ CW RP+CS+P I VVER+S DG KT+
Sbjct: 135 ITWFAAITTYFGYAVLILFGHIRDFFGRMFGMSRYLAT-SPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRITVVERDSPDGNKTM 227
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A7S3HFE5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFE5_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.400e-26 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 10 FATMT-TYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTLQ 285
F T T TY ++ +I +GH+RDF G V ++RY + K+GYA LFKS+E+FFTRRLYHR+Q CWNRP+ S P +++V+ER++KDG TLQ
Sbjct: 11 FVTATLTYLSYFIMIVIGHIRDFGGAVTGQTRY-KGAKTKKGYADLFKSWESFFTRRLYHRLQDCWNRPLSSGPGVYVDVMERDTKDGNCTLQ 102
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A7S1FYU6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYU6_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.260e-26 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 4 TWFATMTTYFTFITVICMGHLRDFLGKVLR--RSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTLQ 285
T+F +TTYF + V+ GH+RDF G L+ SRYL + EGYAPL S+E+F+T+R+YHRIQ C+NRPI S+P A IEV+ER S DG KT++
Sbjct: 92 TFFTALTTYFGYAVVVLFGHIRDFFGITLKLKTSRYLQS-EPPEGYAPLLNSWEHFYTKRIYHRIQDCFNRPISSTPGAKIEVLERVSPDGNKTME 186
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A7S1BVM5_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVM5_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.660e-25 Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 4 TWFATMTTYFTFITVICMGHLRDFLGKVLR--RSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTLQ 285
T+F +TTYF + V+ GH+RDF G L+ SRYL + EGYAPL S+E+F+T+R+YHRIQ C+NRPI S+P A IEV+ER S DG KT++
Sbjct: 133 TFFTALTTYFGYAVVVLFGHIRDFFGITLKLKTSRYLQS-EPPEGYAPLLNSWEHFYTKRIYHRIQDCFNRPISSTPGAKIEVLERVSPDGNKTME 227
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A7S3HFK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFK5_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.830e-25 Identity = 42/86 (48.84%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 25 TYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTL 282
TY ++ +I +GH+RD G + +RY ++GYA LFKS+E+F+TRRLYHR+Q CWNRP+ S P H +V+ER++ DG +TL
Sbjct: 18 TYISYFVLIMLGHIRDICGSLTGNTRYRGA-ATRKGYAELFKSWESFYTRRLYHRLQDCWNRPLSSGPGVHFDVMERDTNDGNRTL 102
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A225WDX7_9STRA (Serine palmitoyltransferase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDX7_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.220e-25 Identity = 46/92 (50.00%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 7 WFATMTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTL 282
W A + Y + +I GHLRD G + SRY D+ AK+GYAPL +FENF+T+R+YHR+Q +NRP+ SP AHI+++ER S D KTL
Sbjct: 8 WAAAILCYIQYAILITFGHLRDHAGSIFGGSRYSDN--AKKGYAPLLVAFENFYTKRIYHRLQDVFNRPVAGSPGAHIDLIERYSVDENKTL 97
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A1E7EPQ0_9STRA (PLP-dependent transferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPQ0_9STRA) HSP 1 Score: 104 bits (259), Expect = 4.960e-24 Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 10 FATMTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAK-------EGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTL 282
FA TTYF + +I GH+RD K++ + RYL D Q YAPL S+ENF+TRRLYHRIQ C+NRPI S+P A I V+ER S DG KT+
Sbjct: 104 FAAYTTYFGYAVLILCGHIRDLFAKIIGQGRYLRDTQNSPYPSDNLRWYAPLLSSWENFYTRRLYHRIQDCFNRPIASNPGAQIHVLERVSDDGNKTM 201
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Match: A0A448Z553_9STRA (Aminotran_1_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z553_9STRA) HSP 1 Score: 103 bits (257), Expect = 9.960e-24 Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 10 FATMTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAK-------EGYAPLFKSFENFFTRRLYHRIQHCWNRPICSSPSAHIEVVERESKDGMKTL 282
FA TTYF + +I GH+RD K+L + RYL A YAPL S+ENF+TRRLYHRIQ C+NRPI SSP A+I V+ER S DG KT+
Sbjct: 149 FAAYTTYFGYAVLIFCGHVRDLFAKILGQGRYLRHTDASPYPSDDLRWYAPLLASWENFYTRRLYHRIQDCFNRPIASSPGANIHVLERVSSDGNKTM 246 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16382.4323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16382.4323.1 >prot_E-fasciculatus_F_contig16382.4323.1 ID=prot_E-fasciculatus_F_contig16382.4323.1|Name=mRNA_E-fasciculatus_F_contig16382.4323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=90bp MTTYFTFITVICMGHLRDFLGKVLRRSRYLDDFQAKEGYAPLFKSFENFFback to top mRNA from alignment at E-fasciculatus_F_contig16382:1367..2744+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16382.4323.1 ID=mRNA_E-fasciculatus_F_contig16382.4323.1|Name=mRNA_E-fasciculatus_F_contig16382.4323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1378bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16382:1367..2744+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16382:1367..2744+ >mRNA_E-fasciculatus_F_contig16382.4323.1 ID=mRNA_E-fasciculatus_F_contig16382.4323.1|Name=mRNA_E-fasciculatus_F_contig16382.4323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=540bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16382:1367..2744+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |