mRNA_E-fasciculatus_F_contig16380.4322.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: D7FSE5_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE5_ECTSI) HSP 1 Score: 278 bits (712), Expect = 1.390e-89 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 1
Query: 1 AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRC DVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK
Sbjct: 38 AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 170
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A6H5KX78_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX78_9PHAE) HSP 1 Score: 278 bits (712), Expect = 5.310e-88 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 1
Query: 1 AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRC DVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK
Sbjct: 72 AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 204
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A6V1P2G8_HETAK (Casein kinase II subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2G8_HETAK) HSP 1 Score: 186 bits (472), Expect = 1.430e-55 Identity = 79/132 (59.85%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 1 AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIH 396
+ D+ DP++AQ+A++LYG+IHARFI T+RGLE MYKKYR +FGRCPR +CK+Q VVP GI+D P KE VK+YCP+C VY + G + LDG+FFGT+F HLFF+TF+RL+P+P +Y P +FGFKIH
Sbjct: 63 SVDDNLDPMMAQAAYLLYGLIHARFITTSRGLEVMYKKYRTGDFGRCPRMLCKDQFVVPAGIYDHPNKEKVKVYCPKCGQVYGVPTNPGEQGLDGSFFGTTFPHLFFLTFNRLIPEPCTETYIPRVFGFKIH 194
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A1W0AB01_9STRA (Casein kinase II subunit beta n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB01_9STRA) HSP 1 Score: 160 bits (406), Expect = 6.480e-47 Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
D P D V A LYG+IHAR+I+T+ GL+AM KKYR AEFG CPR +C QPVVP G++DEP+K +K+YCP+C D+Y + +DGA+FG++F HLFF+T+ L P P+ Y P +FG+KIH+
Sbjct: 65 DIPYDDDVPSCAVELYGLIHARYIITSHGLDAMLKKYREAEFGYCPRALCDGQPVVPAGMYDEPRKAEMKVYCPKCRDLYTPAIDFESATIDGAYFGSTFPHLFFLTYSNLEPAPSTHLYVPRVFGYKIHR 195
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: T0S4R1_SAPDV (Casein kinase II subunit beta n=4 Tax=Saprolegnia TaxID=4769 RepID=T0S4R1_SAPDV) HSP 1 Score: 160 bits (405), Expect = 1.430e-46 Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
D P D V A LYG+IHAR+I+T+ GL+AM KKYR AEFG CPR +C QPVVP G++DEP+K +K+YCP+C D+Y + +DGA+FG++F HLFF+T+ L P P+ Y P +FG+KIH+
Sbjct: 71 DIPYDEDVPSCAVELYGLIHARYIITSHGLDAMLKKYREAEFGYCPRALCDGQPVVPAGMYDEPRKAEMKVYCPKCRDLYTPAIDFESATIDGAYFGSTFPHLFFMTYSNLEPAPSTHLYVPRVFGYKIHR 201
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A1V9YMX9_9STRA (Casein kinase II subunit beta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMX9_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.490e-46 Identity = 68/131 (51.91%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
D P D V A LYG+IHAR+I+T+ GL+AM KKYR AEFG CPR +C QPVVP G++DEP+K +K+YCP+C D+Y + +DGA+FG++F HLFF+T+ L P P+ Y P +FG+KIH+
Sbjct: 68 DIPYDDDVPSCAVELYGLIHARYIITSHGLDAMLKKYREAEFGYCPRALCDGQPVVPAGMYDEPRKAEMKVYCPKCRDLYTPAIDFESATIDGAYFGSTFPHLFFMTYSNLEPAPSTHLYIPRVFGYKIHR 198
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A8K1C3U2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3U2_PYTOL) HSP 1 Score: 159 bits (402), Expect = 1.800e-46 Identity = 70/130 (53.85%), Postives = 92/130 (70.77%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIH 396
D P D V A LYGMIHAR+I+T+ GL++M KKYR +FG CPR +C+ QPVVP G+ DE KK +K++CP+C D+Y V+ Y P+DGA+FGT+F HLFF+T+ L P P+ Y P IFG+KIH
Sbjct: 60 DIPYDDDVPACAAELYGMIHARYIITSHGLDSMMKKYRDRDFGVCPRALCEGQPVVPAGMHDEWKKSEMKVFCPKCRDLYTPVTEYNSPPIDGAYFGTTFPHLFFMTYRELEPPPSTVIYVPRIFGYKIH 189
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A6G0XTG7_9STRA (Casein kinase II subunit beta n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XTG7_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.290e-45 Identity = 67/131 (51.15%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
D P D V A LYG+IHAR+I+T+ GLEAM KK+R +FG CPR +C QPVVP G++DEPKK +K+YCP+C D+Y + +DGA+FG++F HLFF+T+ L P P+ Y P +FG+KIH+
Sbjct: 67 DIPYDDDVPSCAAELYGLIHARYIITSHGLEAMLKKFRDGDFGFCPRALCDGQPVVPAGMYDEPKKAEMKVYCPKCRDLYTPSVDFESTTIDGAYFGSTFPHLFFLTYSNLEPPPSTHLYVPRVFGYKIHR 197
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: F0WPG1_9STRA (Casein kinase II subunit beta n=2 Tax=Albugo TaxID=65356 RepID=F0WPG1_9STRA) HSP 1 Score: 155 bits (392), Expect = 7.110e-45 Identity = 71/131 (54.20%), Postives = 92/131 (70.23%), Query Frame = 1
Query: 7 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
D P D V A LYGMIHAR+I+T+ GL+ M +KYR +FG CPR +C NQ VVP G+ DE KK +KL+CP+C D+Y + Y PLDGA+FG++F HLFF+T+ L P P+ + YTP IFG+KIHK
Sbjct: 60 DIPYDEDVPPYAAELYGMIHARYILTSHGLDTMLQKYREGDFGVCPRALCANQSVVPAGLHDEWKKSEMKLFCPKCCDLYAPPTEYEIAPLDGAYFGSTFPHLFFLTYKELEPTPSTALYTPRIFGYKIHK 190
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Match: A0A816MM18_BRANA (Casein kinase II subunit beta n=3 Tax=Brassica TaxID=3705 RepID=A0A816MM18_BRANA) HSP 1 Score: 151 bits (382), Expect = 8.350e-45 Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 10 EPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCNDVYNTVSPYGGEPLDGAFFGTSFAHLFFITFDRLVPDPARSSYTPLIFGFKIHK 399
E Q+ ++ +A MLYG+IHAR+I+T +GL AM KY+ +FGRCPR C QP +PVG+ D P+ VK+YCP+C D+Y S Y G +DGAFFGT+F HLF +T+ L P A +Y P +FGFK+HK
Sbjct: 4 EEQNELIESAAEMLYGLIHARYILTTKGLAAMLDKYKNYDFGRCPRVYCCGQPCLPVGLSDLPRSSTVKIYCPKCQDIYYPRSKYQGN-IDGAFFGTTFPHLFLMTYGHLKPPKATQNYVPRVFGFKLHK 132 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16380.4322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16380.4322.1 >prot_E-fasciculatus_F_contig16380.4322.1 ID=prot_E-fasciculatus_F_contig16380.4322.1|Name=mRNA_E-fasciculatus_F_contig16380.4322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=134bp AADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTback to top mRNA from alignment at E-fasciculatus_F_contig16380:85..2602+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16380.4322.1 ID=mRNA_E-fasciculatus_F_contig16380.4322.1|Name=mRNA_E-fasciculatus_F_contig16380.4322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2518bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16380:85..2602+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16380:85..2602+ >mRNA_E-fasciculatus_F_contig16380.4322.1 ID=mRNA_E-fasciculatus_F_contig16380.4322.1|Name=mRNA_E-fasciculatus_F_contig16380.4322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=804bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16380:85..2602+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |