mRNA_E-fasciculatus_F_contig16370.4316.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: D7FHZ5_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ5_ECTSI) HSP 1 Score: 164 bits (414), Expect = 9.260e-45 Identity = 86/103 (83.50%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 88 TGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
TGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQ WGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDV IL
Sbjct: 79 TGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQ---------------WGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVLKIL 166
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A7S0MZS7_9CHLO (DNA helicase (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZS7_9CHLO) HSP 1 Score: 107 bits (268), Expect = 3.870e-25 Identity = 58/101 (57.43%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 94 LVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
L +V VTPEKV KSK FM+ L+K K GRLARI IDEAHCCSQ WGHDFRP+Y KLG+LK+QF VPVLA+TAT T ++ DV +L
Sbjct: 187 LKLVYVTPEKVAKSKRFMSKLEKMHKAGRLARIAIDEAHCCSQ---------------WGHDFRPDYLKLGVLKQQFPDVPVLALTATATVRVQVDVCSML 272
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A8J5IT91_9STRA (DEAD domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IT91_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.960e-25 Identity = 56/110 (50.91%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 67 DSKGKGSTGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
D G+GS L ++L+TPEK++KSK+ M+ L+K + RL R VIDEAHCCS+ WGHDFR +Y KLGILKRQF VP+LA+TAT T + DV IL
Sbjct: 151 DIAGEGSASLKILLITPEKLIKSKLLMSRLEKAYQTERLKRFVIDEAHCCSR---------------WGHDFRSDYSKLGILKRQFPKVPILALTATATPRLAKDVKAIL 245
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A7M7SYI8_STRPU (Helicase ATP-binding domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7SYI8_STRPU) HSP 1 Score: 101 bits (252), Expect = 7.870e-25 Identity = 54/101 (53.47%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 94 LVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
L ++ VTPEK+ KSK FMA L K GRLARI IDE HCCSQ WGHDFRP+Y LG+LKRQF VPVL +TAT T + +DV +L
Sbjct: 52 LRLLYVTPEKIAKSKRFMAQLQKCYIKGRLARIAIDEVHCCSQ---------------WGHDFRPDYKMLGVLKRQFPEVPVLGLTATATAGVLEDVKSLL 137
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: K3W7H5_GLOUD (ATP-dependent DNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7H5_GLOUD) HSP 1 Score: 105 bits (263), Expect = 1.110e-24 Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 94 LVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
L ++LVTPEK++KSK+ M+ L+KT + GRL R VIDEAHCCSQ WGHDFR +Y KLGILKRQF VPVLA+TAT T + +V IL
Sbjct: 38 LKILLVTPEKIIKSKLLMSRLEKTYQAGRLLRFVIDEAHCCSQ---------------WGHDFRSDYSKLGILKRQFPTVPVLALTATATPHLVSEVKSIL 123
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A3M6TQQ1_POCDA (ATP-dependent DNA helicase n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TQQ1_POCDA) HSP 1 Score: 105 bits (263), Expect = 5.780e-24 Identity = 57/103 (55.34%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 88 TGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
+GL ++ VTPEK+ KSK FMA L+KT + GRL+RIVIDE HC SQ WGHDFRP+Y LGILKRQF VP+L +TAT T + DDV IL
Sbjct: 177 SGLKLLYVTPEKIAKSKRFMAKLEKTYEGGRLSRIVIDEVHCTSQ---------------WGHDFRPDYKILGILKRQFPGVPILGLTATATSKVVDDVKKIL 264
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A8J9VYA4_BRALA (RECQL protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VYA4_BRALA) HSP 1 Score: 105 bits (262), Expect = 8.460e-24 Identity = 54/101 (53.47%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 94 LVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
L M+ VTPEKV KSK FMA ++K GR AR+VIDE HCCSQ WGHDFRP+Y LG+LKRQ+ +VP+L +TAT T +I +DV IL
Sbjct: 178 LKMLYVTPEKVAKSKRFMAKVEKMHSVGRFARLVIDEIHCCSQ---------------WGHDFRPDYKSLGVLKRQYPNVPILGLTATATSYIVEDVKAIL 263
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A8K1CD67_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD67_PYTOL) HSP 1 Score: 105 bits (261), Expect = 1.080e-23 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 94 LVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDVSCIL 396
L ++L TPEK++KSK+ M+ L+K ++GRL R VIDEAHCCSQ WGHDFR +Y KLGILKRQF +VP+LA+TAT T + +DV IL
Sbjct: 185 LKILLATPEKIIKSKLLMSRLEKAYQSGRLLRFVIDEAHCCSQ---------------WGHDFRNDYSKLGILKRQFPNVPILALTATATPRLVNDVKTIL 270
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A2R6WQN6_MARPO (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WQN6_MARPO) HSP 1 Score: 105 bits (261), Expect = 1.170e-23 Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 79 KGSTGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDV 384
KG+ GL ++ VTPEK+ KSK FM+ L+K K GRL+ + IDEAHCCSQ WGHDFRP+Y LGILK+QF VP++A+TAT T+ ++ DV
Sbjct: 178 KGTGGLRILYVTPEKIAKSKRFMSKLEKCNKAGRLSLMAIDEAHCCSQ---------------WGHDFRPDYKNLGILKKQFPKVPIIALTATATERVQTDV 264
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Match: A0A1Y1HUB5_KLENI (ATP-dependent DNA helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUB5_KLENI) HSP 1 Score: 104 bits (260), Expect = 1.590e-23 Identity = 56/101 (55.45%), Postives = 65/101 (64.36%), Query Frame = 1
Query: 82 GSTGLVMVLVTPEKVVKSKMFMAALDKTAKNGRLARIVIDEAHCCSQAREEIAGRSPHLQCDWGHDFRPEYCKLGILKRQFAHVPVLAVTATCTDFIRDDV 384
G L V VTPEKV KSK FM+ L+K K GRLA I IDEAHCCSQ WGHDFRP+Y LGILK+QF VP++A+TAT T ++DDV
Sbjct: 189 GGQDLRFVYVTPEKVAKSKRFMSKLEKCDKAGRLALIAIDEAHCCSQ---------------WGHDFRPDYHHLGILKKQFPKVPMMALTATATQRVQDDV 274 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16370.4316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16370.4316.1 >prot_E-fasciculatus_F_contig16370.4316.1 ID=prot_E-fasciculatus_F_contig16370.4316.1|Name=mRNA_E-fasciculatus_F_contig16370.4316.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=132bp MRGDDTTGGGGGGGSVDGRGGGDSKGKGSTGLVMVLVTPEKVVKSKMFMAback to top mRNA from alignment at E-fasciculatus_F_contig16370:186..2163+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16370.4316.1 ID=mRNA_E-fasciculatus_F_contig16370.4316.1|Name=mRNA_E-fasciculatus_F_contig16370.4316.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1978bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16370:186..2163+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16370:186..2163+ >mRNA_E-fasciculatus_F_contig16370.4316.1 ID=mRNA_E-fasciculatus_F_contig16370.4316.1|Name=mRNA_E-fasciculatus_F_contig16370.4316.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=792bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16370:186..2163+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |