mRNA_E-fasciculatus_F_contig1637.4314.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: D7G550_ECTSI (Integrin alpha chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G550_ECTSI) HSP 1 Score: 978 bits (2529), Expect = 0.000e+0 Identity = 523/644 (81.21%), Postives = 543/644 (84.32%), Query Frame = 3
Query: 153 MTRFVVCLARRGVIEAGFFLSALLSPLAAAAGTFQSSVNASSSPRIYNASEILNEDWLGYSCASIGDFNGDGLGDIVIGAPGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYGNSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTAGAVSQGHTYLVFGGAGLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIAGFLVPGLYIVFGDGGEPYDNTTAVILASVCGVLGCLFCTVREAQIWLAKREAKAEEARTSNEREDGSIGHGKMNKKDDEQMKLTTPRDINQGCEIVDPT 2084
MT FVVC ARRGV+EAGFFLSALL PLAAAAGTFQS+VNASSSPRIYNASE +NEDWLGYSCASIGD VNGDSLMDVMV +YG+SHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEI+LYA+L+S+TLDRQLSLQYTGNPLSSAGDVNGDGY D+LVGSPTAGAV QGHTYLVFGGAGL RVNLTESDDV+GGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGT GEFDGEAYV+FGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPD RYRAGAAYVVFGRAEGDFAAAYDLRSADIV+GQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDP SLEEAGSAY+VFGWKEEGDVSSWGESVDLSALDGSNGFVI+GSTSGGHFGWTGAANVDMN DGVSDLLI GFLVPGLY+VFG+GGEPYDNTTAVILA VCGVLGCLFC VREA+IWLAKREAKAEEAR S E +D SIGH M K D+EQMK T RDINQGCEIV PT
Sbjct: 1 MTLFVVCPARRGVVEAGFFLSALLCPLAAAAGTFQSNVNASSSPRIYNASE-MNEDWLGYSCASIGD-------------------------------------------------------------------------VNGDSLMDVMVGSYGSSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIELYAKLISDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVYQGHTYLVFGGAGLPSRVNLTESDDVTGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTTGEFDGEAYVIFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDRRYRAGAAYVVFGRAEGDFAAAYDLRSADIVEGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPGSLEEAGSAYIVFGWKEEGDVSSWGESVDLSALDGSNGFVITGSTSGGHFGWTGAANVDMNRDGVSDLLIGGFLVPGLYVVFGNGGEPYDNTTAVILAIVCGVLGCLFCVVREARIWLAKREAKAEEARKSKETDDDSIGHWNMKKGDEEQMKPTNTRDINQGCEIVHPT 570
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: A0A6H5L9N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9N8_9PHAE) HSP 1 Score: 671 bits (1731), Expect = 9.180e-237 Identity = 356/394 (90.36%), Postives = 369/394 (93.65%), Query Frame = 3
Query: 153 MTRFVVCLARRGVIEAGFFLSALLSPLAAAAGTFQSSVNASSSPRIYNASEILNEDWLGYSCASIGDFNGDGLGDIVIGAPGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYGNSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTAGAVSQGHTYLVFGGAGLAGRVNLTESDDVSGGNEGVVVFKGALT---------------DESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG 1289
MT VVCLARRGVIEAGFFLSALL PLAAAAGTF+S+VNASSSPRIYNASEI NEDWLGYSCASIGDFNGDG+GDIVIGAPGASDG+GRAYVVYGNSSGIDEDFDV+ALEDRD AGLVMTGR+GG FSHSIGYAVAAAGDVNGDSLMDVMV AYG+SHLSEGAAHVVYGTNTSAAYD+SFLDLGAG GGGLDGVDGFTLSGMSIEI+LYA+LLS+TLDRQLSLQYTGNPLSSAGDVNGDGY D+LVGSPTAGAVSQGHTYLVFGGAGL GRVNLTESDDV+GGNEGVVVFKGALT DESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG
Sbjct: 1 MTFLVVCLARRGVIEAGFFLSALLCPLAAAAGTFRSNVNASSSPRIYNASEI-NEDWLGYSCASIGDFNGDGVGDIVIGAPGASDGVGRAYVVYGNSSGIDEDFDVSALEDRDSAGLVMTGRQGGTFSHSIGYAVAAAGDVNGDSLMDVMVGAYGSSHLSEGAAHVVYGTNTSAAYDSSFLDLGAGDGGGLDGVDGFTLSGMSIEIELYAKLLSDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVSQGHTYLVFGGAGLPGRVNLTESDDVAGGNEGVVVFKGALTGEFVIICGFHDLCSIDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG 393
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: D7G3P0_ECTSI (Integrins alpha chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P0_ECTSI) HSP 1 Score: 513 bits (1320), Expect = 6.740e-176 Identity = 285/379 (75.20%), Postives = 296/379 (78.10%), Query Frame = 3
Query: 153 MTRFVVCLARRGVIEAGFFLSALLSPLAAAAGTFQSSVNASSSPRIYNASEILNEDWLGYSCASIGDFNGDGLGDIVIGAPGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYGNSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTAGAVSQGHTYLVFGGAGLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG 1289
MT FVVC ARRGVIEAGFFLSALL PLAAAAGTFQS+VNASSSPRIYNASE +NEDWLGYSCASIGD VNGDSLMDVMV +YG+SHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEI+LYA+L+S+TLDRQLSLQYTGNPLSSAGDVNGDGY D+LVGSPTAGAV QGHTYLVFGGAGL RVNLTESDDV+GGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGT GEFDGEAYV+FGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG
Sbjct: 1 MTLFVVCPARRGVIEAGFFLSALLCPLAAAAGTFQSNVNASSSPRIYNASE-MNEDWLGYSCASIGD-------------------------------------------------------------------------VNGDSLMDVMVGSYGSSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIELYAKLISDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVYQGHTYLVFGGAGLPSRVNLTESDDVTGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTTGEFDGEAYVIFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIG 305
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: UPI001867AB2B (FG-GAP repeat protein n=1 Tax=Fluviibacterium sp. MJW13 TaxID=2720031 RepID=UPI001867AB2B) HSP 1 Score: 278 bits (710), Expect = 5.190e-80 Identity = 211/535 (39.44%), Postives = 307/535 (57.38%), Query Frame = 3
Query: 318 DWLGYSCASIGDFNGDGLGDIVIGAPGASDGIGRAYVVYGNSSGIDEDF----DVAALEDRDGA-GLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYG---NSHLSEGAAHVVYGTNTSAAYD-ASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGS---PTAGAVSQGHTYLVFGGAGLAGRVNLTESDDVSG--GNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIG---APEGGTIGEFDGEAYVVFGQE-----NLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGR---AEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLI--------AGFLVPGLYIVFG 1823
D+ G S +S GD NGDG+ DI+IG A+ G G AYV++G ++G + DF D+A+L DG+ G V+TG + G F+ G +VA+AGDVNGD + D+++ A+G +S G ++VV+G +T+ A D A+ +DLG+ LDG GF ++G+ LY + Y+G ++SAGDVNGDG DD+L+G+ AG + G Y+VFG A + S D++ G+ G + D +G+SV+ D+NGDG+ D +IG A GT+ GE YVVFG++ N A S + DG+ GF + G Y+G SVA GDVN DG+DD+++GA+G G G YVVFG+ GDFAA+ DL + +DG L G+ AED +GI V AGD+NGDG+ DI +G +D + +AG +Y+VFG K+ G + SVDL++L+G++GFV G +G + G++ AA D+N DG+ D+LI AG Y+VFG
Sbjct: 153 DYAGISVSSAGDVNGDGIDDILIGGRYAA-GTGEAYVIFGKNTGSEGDFTTSIDLASLGAGDGSTGFVLTGIDAGDFA---GISVASAGDVNGDGIDDMVIGAHGADQSSAYDAGESYVVFGKDTAVAGDFAASIDLGS-----LDGTTGFVVTGL-----LYTD-------------YSGWSVASAGDVNGDGIDDILIGAFGADQAGTFNAGGAYIVFG-KDTAVEGDFAASMDLASLNGSNGFALTGIDAFDYTGYSVAAAGDINGDGIDDILIGSTSADRPGTLSS--GETYVVFGKDTAVAGNFAASIDLASFAAGDGSTGFVLTGIDSYDYSGVSVAAAGDVNGDGFDDIVIGAYGGDTAGTQNVGETYVVFGKDTSVTGDFAASIDLAN---LDGSMGFVLTGVDAEDESGISVASAGDVNGDGIDDILIGGYRADQTTGVDAGESYLVFG-KDTG----FAASVDLASLNGADGFVFKGIGAGDYSGYSVAAAGDVNGDGIDDILIGAGQADTAAGADTGESYLVFG 649
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: A0A846BPW9_9CYAN (Uncharacterized protein (Fragment) n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A846BPW9_9CYAN) HSP 1 Score: 253 bits (646), Expect = 8.910e-72 Identity = 188/536 (35.07%), Postives = 292/536 (54.48%), Query Frame = 3
Query: 309 LNE-DWLGYSCASIGDFNGDGLGDIVIGAPGAS----DGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYG---NSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTA---GAVSQGHTYLVFGGA-GLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGA----PEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIAGF--------LVPGLYIVFGDGGEPYD 1844
+NE D+ G S +S GD N DG+ D++IGA AS +G G++YVV+G +G F++A+L+ +G + R + G +V++AGD+N D + D++V Y N ++ G ++VV+G+ + + L +G +GFTL+ +S + +SSAGD+N DG DD+++G+ A G V G +Y+VFG + G + + L+ D G+ G V+ A D S SVS D+NGDG+ D IIGA P G G++Y+VFG+ N S + + L+G+ GF+I G + GSSV+ GD+N DG DD+++GA G P+G G +YVVFG + G F+A++DL S ++G ++ G +D +G V AGD+NGDG+ D+ +GA +DP+ + AG +YVVFG S+ S++LS LDGSNGFV++G +G G + ++ D+N DG+ DL+I +V Y+VFG+G D
Sbjct: 22 INEGDFSGTSVSSAGDINNDGIDDLIIGADNASPNGKNGAGQSYVVFGRRNGFRAKFELASLKGSNGFAINGINR-----NDRSGLSVSSAGDINNDGIDDLIVGGYNTVSNVNIGSGQSYVVFGSGNGFSGNFELSSL--------NGSNGFTLNSISTH------------------GWLSYSVSSAGDINNDGIDDLIIGTSGADPKGDVGAGQSYVVFGRSNGFSASLELSNLD----GSNGFVLNGIATDDGSEMSVSNAGDINGDGIDDLIIGAWRASPNGNRRA---GQSYIVFGRSNGFSSSLEL--SSLNGSNGFTIKGINAYDRLGSSVSSAGDINGDGIDDLVIGARGADPNGNKNTGQSYVVFGSSNG-FSASFDLSS---LNGSNGFAINGFAKDDGSGYSVSSAGDINGDGIDDLIIGARGADPNGNKSAGQSYVVFG-----STDSFSASLELSNLDGSNGFVLNGIAAGDRSGHSVSSAGDINGDGIDDLVIGALTVDRNDDIVVGQSYVVFGNGTPQLD 508
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: A0A8I0SU81_9PROT (Uncharacterized protein n=1 Tax=Magnetococcales bacterium TaxID=2026759 RepID=A0A8I0SU81_9PROT) HSP 1 Score: 263 bits (671), Expect = 3.430e-71 Identity = 206/543 (37.94%), Postives = 294/543 (54.14%), Query Frame = 3
Query: 306 ILNEDWLGYSCASIGDFNGDGLGDIVIGAPGAS---DGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMV----AAYGNSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTA--GAVSQGHTYLVFGGA-GLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLADSDTVMLD-TDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFG-DVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIA------GFLVPGLYIVFGDGGEPYDNTTAVILASVCG 1880
+ DW GYS +S GD NGDG D++IGA GA G G +YV++G +SG D++ L+ G L +G + GY+V+ AGDVNGD D+M+ A G ++ G ++V++G A S LDL LDG +GF L G++ +G+ +S+AGDVNGDG+DD++VG+P A G + G +Y++FG A GL +++L+ D GN G + GA +D+SG SVS D+NGDG D I+GAP G F G +YV+FG+ A T LD + LDG+ GF + G + ++G V+ GD+N DG+DD+I+GA+G D+ G +GA+YV+FG+A G F + DL + +DG T L G+ +D +G V AGD+NGDG D+ V A T+DP G++YV+FG S + +DLS LDGS GF + G +G G + + D+N DG SDLLI G G +F G +TTA L G
Sbjct: 547 VAANDWSGYSVSSAGDINGDGFDDLIIGAHGADPGGSGSGASYVMFGKASGFTSQIDLSTLDGSTGFRL-----DGVAAYDTSGYSVSTAGDVNGDGFDDLMIGGTWADLGGAN--SGVSYVIFG---KAMGFTSQLDLST-----LDGSNGFRLDGVATG------------------DVSGHSVSNAGDVNGDGFDDLIVGAPWADPGGGNSGASYIIFGKASGLTSQLDLSTLD----GNNGFRL-DGATSDQSGHSVSNAGDVNGDGFDDLIVGAPGTAPGGSFSGASYVMFGK---ASGFTSQLDLSTLDGSTGFRLDGVAAYDWSGYLVSSAGDINGDGFDDLIIGAWGADL--GGANSGASYVIFGKA-GGFTSQLDLST---LDGSTGFRLDGVATDDQSGWSVSNAGDVNGDGFDDLIVSAFTADPGG-SNTGASYVIFG-----KASGFTSQLDLSTLDGSTGFRLDGVATGDVSGRSVSTAGDINQDGFSDLLIGASHADQGGSDSGTSYIFFGGNLTGASTTAQTLTGTVG 1036
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: UPI001881C059 (FG-GAP repeat protein n=1 Tax=Synechocystis sp. LEGE 06083 TaxID=915336 RepID=UPI001881C059) HSP 1 Score: 258 bits (658), Expect = 4.620e-71 Identity = 198/539 (36.73%), Postives = 293/539 (54.36%), Query Frame = 3
Query: 315 EDWLGYSCASIGDFNGDGLGDIVIGA----PGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYG---NSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTA---GAVSQGHTYLVFG-GAGLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFD-GEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIAGFLVP--GL------YIVFGD---GGEPYDNTTAVI 1862
+D G+S +S GD NGDG D++IGA P G +YVV+G S G +++ L +G V+ G + FS +V++AGDVNGD D+++ A+G N + G ++VV+G + + + DL G ++G+DG SG S+ SSAGDVNGDG+DD+L+G+ A G + G +Y+VFG G + +NL D++G N G V+ L D SG SVS D+NGDG DF+IGA G+F+ GE+YVVFG+ S + D L+G+ GF I G +G SV+ GD+N DG+DD+++GA+ P+G AG +YVVFG++ G F+++ +L ++G + G+ D +G V AGD+NGDG D+ +GA +DP+ + AG +YVVFG + G SS S++LS L+GSNGFVI+G S + G + ++ D+N DG DLLI + G+ Y+VFG G DN+ V+
Sbjct: 23 DDQSGFSVSSAGDVNGDGFDDLLIGAFGGDPNGVSDAGESYVVFGKSGGFSSSLNLSDLNGSNG--FVINGIDNIDFS---ARSVSSAGDVNGDGFDDLLIGAFGGDPNGQFNAGESYVVFGKSGGFSSSLNLADLNGSNGFVINGIDGGDFSGRSV--------------------------SSAGDVNGDGFDDLLIGAYFADPNGQSNAGESYVVFGKSGGFSSSLNLA---DLNGSN-GFVINGIDLADYSGRSVSSAGDVNGDGFDDFLIGANRADPNGQFNAGESYVVFGKSGGFSSSLNLAD--LNGSNGFVINGIDGSDASGRSVSSAGDINGDGFDDLLIGAYFADPNGVSNAGESYVVFGKS-GGFSSSLNLSD---LNGSNGFVINGIDNSDYSGFSVSSAGDVNGDGFDDLLIGAVFADPNGVSNAGESYVVFG--KSGGFSS---SLNLSDLNGSNGFVINGIDSNDYSGLSVSSAGDVNGDGFDDLLIGAYRADPNGVSNAGESYVVFGSADIGASDIDNSAPVL 515
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: UPI001E62ED95 (hypothetical protein n=1 Tax=Gloeocapsa sp. PCC 7428 TaxID=1173026 RepID=UPI001E62ED95) HSP 1 Score: 254 bits (649), Expect = 1.180e-70 Identity = 198/530 (37.36%), Postives = 294/530 (55.47%), Query Frame = 3
Query: 309 LNE-DWLGYSCASIGDFNGDGLGDIVIGAPGAS----DGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVA---AYGNSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTAGAVSQGHTYLVFGGA-GLAGRVNLTESDDVSGGNEGVVV----FKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFD-GEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIAGFLVPGL-----------YIVFG 1823
+NE D+ G S ++ GD NGDG D++IGAP A+ +G G++Y+V+G +SG D D+A L +G + R G+ GY+V++AGDVNGD D++V A N G + VV+G ++ +DAS LD LDG +GF ++G+ + ++G +SSAGDVNGDG+DD+++G+ A G +Y+VFG A G ++ + D GN G VV L + SVS D+NGDG +D IIGAP G++ G++YV+FG+ + D+ ++ L T L+G+ GF I G + + Y+G SV+ GD+N DG+DD+I+GA G DG+Y G +YVVFG+A G F + DL + ++G + G+ A D +G V AGD+NGDG D+ VGAP++ P+ AG +YVVFG S + + DL+ LDGSNGFVI+G + G + + D++ DG DL+I PG Y++FG
Sbjct: 106 INEFDFSGRSVSNAGDVNGDGFDDLIIGAPRANPNGQNGAGQSYLVFGKASGFDASLDLATLNGNNGFVINGINRFDGL-----GYSVSSAGDVNGDGFNDLIVGIRYAEPNGQNGAGQSCVVFGK--ASGFDAS-LDAST-----LDGNNGFVVNGIDV------------------YDFSGYSVSSAGDVNGDGFDDLIIGANGA-----GQSYVVFGKALGFDASLDASTLD----GNNGFVVNGIDIGNVLGTTTKVSVSNAGDINGDGFADLIIGAPLASLDGQYSVGKSYVIFGKASGFDA-SLDLAT-LNGSNGFVINGINVNDYSGRSVSSAGDINGDGFDDLIIGADGARLDGQYSVGKSYVVFGKASG-FDTSLDLAT---LNGSNGFVINGINAYDGSGFSVSSAGDINGDGFDDLIVGAPSATPNFQSRAGQSYVVFG-----KASGFDANFDLATLDGSNGFVINGINADDFSGISVSKAGDVDGDGFDDLIIG---APGADPNGRESAGESYVIFG 581
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: UPI0019F10DBA (FG-GAP repeat protein n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019F10DBA) HSP 1 Score: 253 bits (647), Expect = 1.770e-70 Identity = 198/521 (38.00%), Postives = 287/521 (55.09%), Query Frame = 3
Query: 306 ILNEDWLGYSCASIGDFNGDGLGDIVIGA----PGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYG---NSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTAGAVSQGHTYLVFG-GAGLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGA----PEGGTIGEFDGEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLI-AGFLVPG--LYIVFG 1823
I D G S + GD NGDGL D++IGA P + G +YVV+G G ++A L +G V+ G + FS G +V+ AGD+NGD D+++ A+ N + G ++VV+G + A + DL G ++G++G+ SG S+ S AGD+NGDG DD+++GS G S G +Y+VFG G A VNL + D G+ G V+ + D SG++VS D+NGDG+ D IIGA P+G T G G +YVVFG++ D + D LDG GF I G + +G+SV GD+N DG DD+I+GA G P+G AG +YVVFGR +G FAA+ +L AD+ +G+ + G+ +D +G+ V AGD+NGDG+ D+ +GAP ++P+ AG +YVVFG E+G V+S ++L+ LDG NGFVI+G G + + D+N DG+ DL+I A + P Y+VFG
Sbjct: 23 IDKSDLSGRSVSDAGDINGDGLNDLIIGAYLAAPNGNRNAGESYVVFGRDQGFAASLNLADLNGDNG--FVINGIDESNFS---GRSVSGAGDINGDGFDDLIIGAFTADPNGNGLAGESYVVFGRDQGLAASLNLADLDGRNGFVINGINGYDRSGWSV--------------------------SGAGDINGDGLDDLIIGSQGFGLYSSGQSYVVFGRDQGFAASVNLADLD----GSNGFVLNGIYVADRSGYAVSDAGDINGDGIDDLIIGASFANPDG-TRGA--GASYVVFGRDRGFDPSLELAD--LDGRNGFVINGIDEFDRSGTSVNSAGDINGDGIDDLIIGADGGNPNGTRDAGESYVVFGRDQG-FAASLNL--ADL-NGRDGFVINGIDEDDRSGVSVSGAGDINGDGIDDLIIGAPLAEPNGNHWAGESYVVFGC-EQGFVAS----LNLADLDGHNGFVINGIDEYDLSGTSVSGAGDINGDGIDDLIIGARWAEPNGESYVVFG 494
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Match: A0A846BR12_9CYAN (Uncharacterized protein (Fragment) n=1 Tax=Symploca sp. SIO1B1 TaxID=2607763 RepID=A0A846BR12_9CYAN) HSP 1 Score: 259 bits (663), Expect = 2.470e-70 Identity = 189/526 (35.93%), Postives = 297/526 (56.46%), Query Frame = 3
Query: 327 GYSCASIGDFNGDGLGDIVIGA----PGASDGIGRAYVVYGNSSGIDEDFDVAALEDRDGAGLVMTGREGGMFSHSIGYAVAAAGDVNGDSLMDVMVAAYG---NSHLSEGAAHVVYGTNTSAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIKLYAELLSETLDRQLSLQYTGNPLSSAGDVNGDGYDDVLVGSPTA---GAVSQGHTYLVFGGA-GLAGRVNLTESDDVSGGNEGVVVFKGALTDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFD-GEAYVVFGQENLADSDTVMLDTDLDGTVGFSILGPSDDAYAGSSVAGIGDVNSDGYDDVIVGAFGDVPDGRYRAGAAYVVFGRAEGDFAAAYDLRSADIVDGQTATSLLGLRAEDATGIGVGPAGDLNGDGVPDIWVGAPTSDPDSLEEAGSAYVVFGWKEEGDVSSWGESVDLSALDGSNGFVISGSTSGGHFGWTGAANVDMNHDGVSDLLIAGFLVPGL--------YIVFGDGGEPYD 1844
GYS +S GD N DG+ D++IGA P +D G++YVV+G+S+G F+++ L+ +G ++ G + +G +V++AGD+NGD + D+++ A G N + G ++VV+G+ S + +F DL + LDG +GF L G++ + +G +SSAGD+NGDG DD+++G+P A G G +Y+VFG + G + +L++ + G+ G ++ D SG SVS D+NGDG+ D IIGA G G++YVVFG N S+ + ++LDGT GF + G + ++G SV+ GD+N+DG DD+I+GA+ PDG AG +YVVFG + G F+ + DL + ++G L G+ D +G V AGD+NGDG+ D+ +GA +DP+ +AG +YVVFG + + S+DLS LDGSNGF+++G G + G + ++ D+N DG+ DL+I +L Y+VFG+ D
Sbjct: 29 GYSLSSAGDINNDGIDDLIIGALWADPNGNDNAGQSYVVFGSSNGFSPSFELSNLDGTNG--FILNGINAYDY---LGNSVSSAGDINGDGIDDLIIGASGADPNGNSGGGKSYVVFGS--SNGFSTNF-DLSS-----LDGTNGFILKGIAED------------------DNSGYSVSSAGDINGDGIDDLIIGAPDADPNGNSDAGQSYVVFGSSNGFSASFDLSQLN----GSNGFILNGINGGDFSGRSVSSAGDINGDGIDDLIIGASGADPNGNSSVGQSYVVFGNSNGFSSNFDL--SNLDGTNGFVLNGINTFDFSGISVSSAGDINNDGIDDLIIGAYSADPDGNSDAGQSYVVFGSSNG-FSPSLDLSN---LNGSNGFILNGINGGDFSGRSVSSAGDINGDGIDDLIIGASGADPNGNSDAGQSYVVFGSSK-----GFSPSLDLSNLDGSNGFILNGINGGDNSGISVSSAGDINGDGIDDLIIGAYLADPNGNFEAGQDYVVFGNRAPELD 508 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1637.4314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1637.4314.1 >prot_E-fasciculatus_F_contig1637.4314.1 ID=prot_E-fasciculatus_F_contig1637.4314.1|Name=mRNA_E-fasciculatus_F_contig1637.4314.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=645bp MTRFVVCLARRGVIEAGFFLSALLSPLAAAAGTFQSSVNASSSPRIYNASback to top mRNA from alignment at E-fasciculatus_F_contig1637:4157..12277+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1637.4314.1 ID=mRNA_E-fasciculatus_F_contig1637.4314.1|Name=mRNA_E-fasciculatus_F_contig1637.4314.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=8121bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1637:4157..12277+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1637:4157..12277+ >mRNA_E-fasciculatus_F_contig1637.4314.1 ID=mRNA_E-fasciculatus_F_contig1637.4314.1|Name=mRNA_E-fasciculatus_F_contig1637.4314.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3870bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1637:4157..12277+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |