mRNA_E-fasciculatus_F_contig16366.4311.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 1.310e-135 Identity = 199/214 (92.99%), Postives = 205/214 (95.79%), Query Frame = 1
Query: 1 ALVLERLTKQQSKRGVKFVNLLRSGGIPMLHCKNVRSYAHGVVIFNTVHAAAALAGAPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSRLLLRFPPMLAPAMQVDLADGRDTSVAWTLEEIVRIADKHKGSAPACRAVLTAVKKCVSRGDGVPSTRPRDLPFVSELISGGSDSSRALKRKV 642
+LVLERL+KQQSKRGVKFVNLLRSGGIP+LHCKNVRSY HGVVIFNTVHA AALAG LRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVS LLLRFPPMLAPAMQ DLADGRDTSVAWTLEEIVRIADKHKGSAPAC AVL+AVKKCVS GDGVPSTRPRDLPFVSEL+SGGSDSSRAL RK+
Sbjct: 193 SLVLERLSKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRKL 406
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI) HSP 1 Score: 302 bits (773), Expect = 8.080e-102 Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 1
Query: 1 ALVLERLTKQQSKRGVKFVNLLRSGGIPMLHCKNVRSYAHGVVIFNTVHAAAALAGAPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSRLLLRFPPMLAPAMQVDLADGRDTSVAWTLEEIVRI 471
+LVLERLTKQQSKRGVKFVNLLRSGGIP+LHCKNVRSY HGVVIFNTVHAAAALAG PLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVS LLLRFPPMLAPAMQ DLADGRDTSVAWTLEEIVRI
Sbjct: 39 SLVLERLTKQQSKRGVKFVNLLRSGGIPVLHCKNVRSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Match: A0A2G6KRZ4_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G6KRZ4_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 1.390e-14 Identity = 61/177 (34.46%), Postives = 83/177 (46.89%), Query Frame = 1
Query: 55 VNLLRSGGIPMLHCKNVRSYAHGVVIFNTVHAAAALAGAPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPC-CGVTLPQL-ELFLCLPTFLFSLVSRLLLRFPPMLAPAMQVDLADGRDTSVAWTLEEIVRIADKHKGSAPACRAVLTAVKKCVSRGDGVPSTRPRDL 579
V LL S G+P C ++S G +I N + ALAG PL + + R R + AA IRE L+ L A P G P L L LP++LF LV+R +L+ P +MQ DL GR T V + EI+ + +K P R ++ VK+ S G P R L
Sbjct: 161 VRLLDSSGLPCQACPEMKSVQWGKLIMNLNNPVNALAGIPLIEELEQRKYRKVLAASIREALEVLKQAG-------IKPARIGKVPPSLMPAILELPSWLFKLVARAMLKIDPQATSSMQEDLVSGRKTEVDYLNGEIITLGEKSGLQCPVNRKIVALVKESESGRSGSPKLSARRL 330
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Match: UPI000782BEFD (2-dehydropantoate 2-reductase n=1 Tax=Endozoicomonas arenosclerae TaxID=1633495 RepID=UPI000782BEFD) HSP 1 Score: 55.8 bits (133), Expect = 1.250e-5 Identity = 34/118 (28.81%), Postives = 58/118 (49.15%), Query Frame = 1
Query: 127 VIFNTVHAAAALAGAPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSRLLLRFPPMLAPAMQVDLADGRDTSVAWTLEEIVRIADK 480
++ N ++ A++G PL++ ++ RH R LWA + EGL + + + N + L + L LP FLF +V+ L+ +M DL GR+T V E+++ A K
Sbjct: 189 LLLNLNNSINAMSGVPLKEQLKQRHYRKLWAECMNEGLAVM----KKSGVQPVNIGTAIALENMPFVLKLPDFLFKVVAAKALKIDDRARMSMWADLQRGRETEVEELNGEVLKYAHK 302
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Match: A0A257K5S4_9BURK (2-dehydropantoate 2-reductase (Fragment) n=1 Tax=Burkholderiales bacterium PBB5 TaxID=2015567 RepID=A0A257K5S4_9BURK) HSP 1 Score: 54.3 bits (129), Expect = 4.000e-5 Identity = 48/141 (34.04%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 61 LLRSGGIPMLHCKNVRSYAHGVVIFNTVHAAAALAGAPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQ-LELFLCLPTFLFSLVSRLLLRFPPMLAPAMQVDLADGRDTSVAWTLEEIVRIADK 480
LL + G+P++ +++ G ++ N + AL+G PLR + D R AA+I E L L AR A G P+ L L LPT LF L +R +LR M +M DLA R T V E++R+A K
Sbjct: 171 LLDAAGLPVVMYDDLKPVQWGKLLLNLNNVVNALSGQPLRAQLLDHDLRTCTAALIDE---TLGLLARAKIKPAKQ---GPVSPRWLPWVLRLPTPLFKLAARRMLRIDDMARSSMADDLARNRPTEVNAINGEVLRLAGK 305 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16366.4311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16366.4311.1 >prot_E-fasciculatus_F_contig16366.4311.1 ID=prot_E-fasciculatus_F_contig16366.4311.1|Name=mRNA_E-fasciculatus_F_contig16366.4311.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=227bp ALVLERLTKQQSKRGVKFVNLLRSGGIPMLHCKNVRSYAHGVVIFNTVHAback to top mRNA from alignment at E-fasciculatus_F_contig16366:1..2664+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16366.4311.1 ID=mRNA_E-fasciculatus_F_contig16366.4311.1|Name=mRNA_E-fasciculatus_F_contig16366.4311.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2664bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16366:1..2664+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16366:1..2664+ >mRNA_E-fasciculatus_F_contig16366.4311.1 ID=mRNA_E-fasciculatus_F_contig16366.4311.1|Name=mRNA_E-fasciculatus_F_contig16366.4311.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1362bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16366:1..2664+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |