mRNA_E-fasciculatus_F_contig16357.4307.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: D8LB84_ECTSI (GI23857 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB84_ECTSI) HSP 1 Score: 292 bits (747), Expect = 5.430e-97 Identity = 162/187 (86.63%), Postives = 165/187 (88.24%), Query Frame = 1
Query: 1 QVEDEVRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAG-SAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWISTVVGRPGFGQAAGGGDGRQTSSARRGASPAGAAEVLHADQ 558
QVEDEVRKLE AGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFE+TAG SAAQSSRP PTPVYVTHG ADGMVKVAWGRSTAEKLK +G LDLTFKEHVELDHEL EEQ IAGLLDWISTVVGRPGFGQ GGGDGRQTS+ARRG SPAGA EVLHADQ
Sbjct: 93 QVEDEVRKLEDAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEVTAGGSAAQSSRPAPTPVYVTHGAADGMVKVAWGRSTAEKLKARG------GLDLTFKEHVELDHELEEEQ-----IAGLLDWISTVVGRPGFGQVVGGGDGRQTSAARRGVSPAGATEVLHADQ 268
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A6H5K9N1_9PHAE (Abhydrolase_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N1_9PHAE) HSP 1 Score: 221 bits (562), Expect = 6.220e-70 Identity = 121/144 (84.03%), Postives = 123/144 (85.42%), Query Frame = 1
Query: 1 QVEDEVRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDW 432
QVEDEVRKLE AGVP SGVFVGGFSMGGCLALE LGAEGLAGRLAGVFSHASFLSDDSAVFE+TAGSAAQSSR TPTPVYVTHG ADGMVKVAWGR+TAEKLK K LDLTFKEHVELDHELGEEQAR F G W
Sbjct: 93 QVEDEVRKLEDAGVPSSGVFVGGFSMGGCLALETLGAEGLAGRLAGVFSHASFLSDDSAVFEMTAGSAAQSSRQTPTPVYVTHGAADGMVKVAWGRATAEKLKAKT------GLDLTFKEHVELDHELGEEQARKFLGVGGGWW 230
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A7R9FG11_9NEOP (Palmitoyl-protein hydrolase n=2 Tax=Timema TaxID=61471 RepID=A0A7R9FG11_9NEOP) HSP 1 Score: 81.3 bits (199), Expect = 8.180e-16 Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1
Query: 16 VRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWIST 441
+++ ++GVP S + VGGFSMGG +AL LG L +LAGVF+ +SFL++ SA++E+ + ++ +P P+++ HG D +V + WGR T +KL G LD F + HEL + + + L DW+ T
Sbjct: 58 IQQEVSSGVPLSRIIVGGFSMGGAMALH-LGYRFLP-QLAGVFALSSFLNEKSAIYEVLSRRTIEAKQPNLPPLFMCHGDRDTLVPIKWGRETCDKLSKLG-------LDTQFHKVTNALHELKKTELKQ-----LYDWVKT 185
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A3S2LAD2_CHISP (Palmitoyl-protein hydrolase n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2LAD2_CHISP) HSP 1 Score: 75.5 bits (184), Expect = 2.270e-13 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query: 1 QVEDEVRKL----EAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHL 342
++E EVR L AG+P + + VGGFSMGGCLAL A +AGVF+ +SFL+++S V+E Q S+ P+ HG D MV++ WG+ST E LK G KG FH+
Sbjct: 91 EIEKEVRHLIQKENEAGIPSNRIIVGGFSMGGCLALHT--AYRWVRDVAGVFAFSSFLNENSIVYEDL-----QKSQHNLPPLLQLHGNRDTMVQLVWGQSTFENLKKLG-VKGEFHI 200
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A7R9DWX7_9NEOP (Palmitoyl-protein hydrolase n=2 Tax=Timema TaxID=61471 RepID=A0A7R9DWX7_9NEOP) HSP 1 Score: 75.9 bits (185), Expect = 3.010e-13 Identity = 49/142 (34.51%), Postives = 78/142 (54.93%), Query Frame = 1
Query: 16 VRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWIST 441
+++ ++GVP + + VGGFSMGG +AL LG L ++AGVF+ +SFL++ SA++E+ + + + P+Y+ HG D +V + WGR T +KL G LD F + HEL + + L DW+ T
Sbjct: 134 IQQEVSSGVPLNRIIVGGFSMGGAMALH-LGYRFLP-QVAGVFALSSFLNEKSAIYEVLSRRTIEEKQQNLPPLYMCHGDRDMLVPIKWGRETCDKLSKLG-------LDTHFHKITNALHELKRTELKQ-----LYDWVKT 261
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A813DJN3_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DJN3_POLGL) HSP 1 Score: 75.1 bits (183), Expect = 9.500e-13 Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 1
Query: 4 VEDEVRKL-------EAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVF-EITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWISTVVG-RPGFGQA 471
VED V +L ++ G+P S + VGGFSMGG +AL+ A +L VF+ +SFL DD+AV+ ++ AG AA ++ + P ++ HG AD +++AW +TA +L+ G L + F + HEL +E+ R L DW+ +G PG +A
Sbjct: 168 VEDSVSRLVCVLDQLKSDGIPASRIAVGGFSMGGGIALQL--ALRHPEKLGAVFALSSFLCDDAAVYRQLEAGGAAGAAGTSWPPTFMAHGQADDFIRIAWAEATARRLR-------GLGLPVQFAALPGVRHELVKEEIRM-----LGDWLWQTIGLEPGLEKA 318
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A7R9JCA1_TIMCA (Palmitoyl-protein hydrolase n=3 Tax=Timema TaxID=61471 RepID=A0A7R9JCA1_TIMCA) HSP 1 Score: 72.0 bits (175), Expect = 3.510e-12 Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 16 VRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWIST 441
+++ ++GVP + + VGGFSMGG +AL LG L ++AGVF+ +SFL++ SA++E+ + + + P+++ HG D +V + WG T +KL G LD F + HEL + + L DW+ T
Sbjct: 76 IQQEVSSGVPLNRIIVGGFSMGGAMALH-LGYRFLP-QVAGVFALSSFLNEKSAIYEVLSRRTIEEKQHNLPPLFMCHGDRDMLVPIKWGHETCDKLSKLG-------LDTHFHKVTNALHELKRTELKQ-----LYDWVKT 203
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A212EGJ8_DANPL (Palmitoyl-protein hydrolase n=2 Tax=Danaus TaxID=13036 RepID=A0A212EGJ8_DANPL) HSP 1 Score: 72.0 bits (175), Expect = 4.450e-12 Identity = 47/118 (39.83%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1 QVEDEVRKL----EAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHL 342
Q+E +++KL AG+P S + VGGFSMGG LAL A +AGVF+ +SFL+D+S V++ SA T P+ HG +D +V++AWG +T ++L++ G +G FH+
Sbjct: 92 QIEVDIKKLIKSENEAGIPSSRIIVGGFSMGGALALHT--AYRWDPNVAGVFAFSSFLNDNSVVYKELRDSA------TKVPLLQIHGDSDDLVELAWGEATFKELRSLG-VQGNFHI 200
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A7R9EQS9_9NEOP (Palmitoyl-protein hydrolase n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9EQS9_9NEOP) HSP 1 Score: 69.3 bits (168), Expect = 4.510e-11 Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1
Query: 16 VRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWIST 441
+++ ++GVP S + VGGFSMGG +AL LG L +LAGVF+ +SFL++ + ++ +P P+++ HG D +V + WGR T +KL G LD F + HEL + + + L DW+ T
Sbjct: 101 IQQEVSSGVPLSRIIVGGFSMGGAMALH-LGYRFLP-QLAGVFALSSFLNEKRTI---------EAKQPNLPPLFMCHGDRDTLVPIKWGRETCDKLSKLG-------LDTQFHKVTNALHELKKTELKQ-----LYDWVKT 219
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Match: A0A7S3HFW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFW7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.650e-11 Identity = 46/131 (35.11%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 55 VFVGGFSMGGCLALEALGAEGLAGRLAGVFSHASFLSDDSAVFEITAGSAAQSSRPTPTPVYVTHGGADGMVKVAWGRSTAEKLKTKGKTKGGFHLDLTFKEHVELDHELGEEQARSFFIAGLLDWISTVV 447
VF+GGFSMGG LAL L + +L G+F+ SFL +SAV G +AQ P+ + HG +D M++ WGR TA L + L++ F+ + +DHE+ + +A LLDW+ +
Sbjct: 122 VFIGGFSMGGGLALHTL-RKHYPEKLRGIFTMGSFLVQESAVVTGPLGRSAQ------VPILMMHGESDSMIRCEWGRQTASNLLLRD-------LNVQFRTYKNVDHEMDTSE-----LADLLDWVKDTL 233 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16357.4307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16357.4307.1 >prot_E-fasciculatus_F_contig16357.4307.1 ID=prot_E-fasciculatus_F_contig16357.4307.1|Name=mRNA_E-fasciculatus_F_contig16357.4307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=186bp QVEDEVRKLEAAGVPRSGVFVGGFSMGGCLALEALGAEGLAGRLAGVFSHback to top mRNA from alignment at E-fasciculatus_F_contig16357:621..2580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16357.4307.1 ID=mRNA_E-fasciculatus_F_contig16357.4307.1|Name=mRNA_E-fasciculatus_F_contig16357.4307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1960bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16357:621..2580+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16357:621..2580+ >mRNA_E-fasciculatus_F_contig16357.4307.1 ID=mRNA_E-fasciculatus_F_contig16357.4307.1|Name=mRNA_E-fasciculatus_F_contig16357.4307.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1116bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16357:621..2580+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |