mRNA_E-fasciculatus_F_contig1634.4300.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1634.4300.1
Unique NamemRNA_E-fasciculatus_F_contig1634.4300.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 563 bits (1450), Expect = 6.630e-196
Identity = 291/344 (84.59%), Postives = 313/344 (90.99%), Query Frame = 2 
Query:  293 RLFRIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVWEPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSPINTEVPSPSSPDGVLGPLRRLPLVGRMFVSSSLGPAGTSHSTAAPQDAGTG 1324
            RLFR+QVLLLS+ GLIPLLL+ILDP L+FFD+TANSC TS GA +VVL MDA GFS ILCLWLVCARQLR VRKQFNEYEAM+WTLSCLT+LL SYA VVAI+L+GHH YVRRVAI WEP KMKLTGNAEYLYSFTQGFSEMPSPAQLKANLA+QLSV+QLRVEFRRYIE KVA ELVDFYLDSLDREE+  YF RQA TMRIVDQYIREGAPDQVNISGECR++ILST VTAYDIFDRAR EVLD+METNFQTDFVETEGFRRIV+A+E+EQRQIRLLQAEGFLLPNT TSP +TEV SPSSPDGVLGP RRL LVGRM  SSS+GPA TS S+AAPQDAGTG
Sbjct:   98 RLFRVQVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYFARQAATMRIVDQYIREGAPDQVNISGECRDEILSTHVTAYDIFDRARAEVLDVMETNFQTDFVETEGFRRIVNAAELEQRQIRLLQAEGFLLPNTGTSPTDTEVLSPSSPDGVLGPFRRLSLVGRMLFSSSVGPARTSLSSAAPQDAGTG 441
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: A0A6H5K0N5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE)

HSP 1 Score: 438 bits (1127), Expect = 3.380e-148
Identity = 248/377 (65.78%), Postives = 288/377 (76.39%), Query Frame = 2 
Query:  302 RIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQ-----------------LKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSPINTEVP-SPSSPDG-VLGPLRRLPLVGRMFVSSSLGPAGTSHSTA---APQDAGTG 1324
            + QVLL+S++ L PLL +IL P L+FFD+T NSC+T+  +  VVLAM+A+GF  I  LW VCARQLR VRKQFNEYEAM+WTLSCLTLLL SYAAVVAI+LN  HVYVRRVAIV+              EP+K KL G+ EYL SFT+GFSEMPSPAQ                 LKA+LAEQLSVQQLRVEFRRY+ET VAQELVDFYLDSLDREE+KGYF RQA TMRIV+QYIREG PDQVNISGECRE+ILSTDVTAYDIFDRAR EVL +METNFQ DFVETEGFRRIVDASE+EQR++RLL+AEG L+P+  T+P+    P S  SP G ++  LR LPLVGR+F SSS  P+  +H+ +    P  AG+G
Sbjct:   16 KYQVLLMSSISLGPLLAAILVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYVICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNRHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLGGDTEYLNSFTKGFSEMPSPAQVRKLPPAARDSSNDLVLLKASLAEQLSVQQLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLLRAEGVLVPSASTTPVRLAAPRSIFSPRGRLVDSLRCLPLVGRLFSSSS--PSAVAHAVSRSTTPGGAGSG 390
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 9.400e-140
Identity = 230/321 (71.65%), Postives = 259/321 (80.69%), Query Frame = 2 
Query:  419 AMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSPINTEVP-SPSSPDG-VLGPLRRLPLVGRMFVSSSLGPAGTSHSTAAPQDAGTGGGE 1333
            A  VVLAM+A+GF AI  LW VCARQLR VRKQFNEYEAM+WTLSCLTLLL SYAAVVAIVLN  HVYVRRVAIV+              EP+K KL G+ EYLYSFT+GFSEMPSPAQLKA+LAEQLSVQQLRVEFR+Y+ET VAQELVDFYLDSLDREE+KGYF RQA TMRIV+QYIREG+PDQVNISGECRE+ILSTDVTAYDIFDRAR EVL +METNFQ DF+ETEGFRRIVDASE+EQRQ+RLL+AEG L+P+  T+P+    P S  SP G +L   RRLPLVGR+F  SS  P+  +H+ +     G G GE
Sbjct:  123 AKNVVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLKASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLLRAEGVLVPSASTTPVRLAAPPSIFSPRGRLLDSCRRLPLVGRLFSFSS--PSAVAHAVSRSSTPGAGSGE 441
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 3.810e-125
Identity = 209/331 (63.14%), Postives = 244/331 (73.72%), Query Frame = 2 
Query:  302 RIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLW----------------------------LVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTS 1168
            + Q++LLS++ L P L+++L PG Y FD+T N C+T+  +  V LAM+AVGF  I  +W                             VC RQLR VRKQFNEYE M+WTLSCLTLLL SYA VV +VL+G HV VRRVAIV+              EP+  K T + EYL+SFT+GFS++PSPAQLKA+LAEQLSV+QLR EFRRYIETKVAQELVDFYLDSLDREE+K YF RQAVTMRIV QYIREGAPDQVNISGECRE+ILST VTAYDIFDRAR EVL +METNFQ +FVETEGFRRIV+ASE+EQR+ RLL+A GFL P+T  S
Sbjct:  124 KYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFARQAVTMRIVAQYIREGAPDQVNISGECREEILSTHVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVEASELEQRENRLLRAGGFLPPDTPPS 454
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 4.350e-117
Identity = 193/303 (63.70%), Postives = 234/303 (77.23%), Query Frame = 2 
Query:  308 QVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVL-NGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSP 1171
            Q+ LLS++ L+P L+++L PG Y FD+T NSC+T+  +  V L M+AVGF  I  LW VC RQLR VRKQFNEYEA++WTLSCL LL+LSY   V I+L N HHV  RR+AIV+              EPL  K  G+ EYL+SFT+GFSEMPSPAQLKA+LAEQLSV+QLR EFR Y+ TKVAQELV+FYLDSLDREE+ G+F RQA TMRIV +YIR+GAP+QVNIS  CRE+I+ST+VTAYDIFDRAR EVL +ME  F+ +FVETEGFRRI +ASE+EQR+ RLL+A GFL P+T   P
Sbjct:  126 QIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLKASLAEQLSVEQLRDEFRGYMRTKVAQELVNFYLDSLDREEIHGFFGRQAATMRIVARYIRDGAPEQVNISEACREEIVSTNVTAYDIFDRARAEVLAVMEAEFKAEFVETEGFRRIANASELEQREKRLLRAGGFLPPSTPPGP 428
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 3.520e-115
Identity = 186/260 (71.54%), Postives = 215/260 (82.69%), Query Frame = 2 
Query:  302 RIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLME 1039
            + QV+++S++ L PLL ++L P L+FFD+T NSC+T+  +  VVLAM+A+GF  I  LW VC RQLR VRKQFNEYEAM+WTLSCLTLLL SYAAVVAI+LN  HV VRRVAIV+              EP+  K TG+  YL+SFT+GFSEMPSPAQLKA+LAEQLSV+QLRVEFRRYIETKVAQELVDFYLDSLDREE+KGYF RQA TMRIV+QYIREG+PDQVNISGECRE+ILSTDVTAYDIFDRAR EVL +ME
Sbjct:  108 KYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVME 367
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FU00_ECTSI (Regulator of G-protein signaling 13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU00_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 3.220e-112
Identity = 190/318 (59.75%), Postives = 230/318 (72.33%), Query Frame = 2 
Query:  302 RIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVL-NGHHVYVRRVAIVWE---------------------------PLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSP 1171
            R Q++LLS+  L+PLL+++L PG Y FD+  N C+T+  +  VVLAM+A G   I  LW VC RQLR VRKQFNEY+ M  TL C+TL+ +SYA VV + L N H V  RR+AIVW                            PL  K  G+ EYL+SFT+GFSE+PSPAQLKA+LAEQLSV+QLR+EFR Y++TKVA+ELVDFYL+SLDREE+ G+F RQAVTMRIV +YIREGAP+QVNISG CREDILSTDVTAYDIFDRAR EVL LME +F+  FVETEGFRRI  AS +E R+ RLLQA G L  +T+ +P
Sbjct:   11 RYQIMLLSSPCLVPLLVTLLVPGAYVFDEAVNLCNTTSTSRTVVLAMNAFGCCIICFLWFVCVRQLRWVRKQFNEYKEMTRTLLCVTLISVSYALVVVVALDNSHQVLARRLAIVWRGKSSGEIAGGDLHLVSLYLGQERLAERPLVKKWEGDEEYLWSFTKGFSELPSPAQLKASLAEQLSVEQLRIEFRGYMQTKVARELVDFYLESLDREEIHGFFGRQAVTMRIVARYIREGAPEQVNISGACREDILSTDVTAYDIFDRARAEVLALMEGDFKAGFVETEGFRRIAVASYLEDRENRLLQAGGLLPADTLPAP 328
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.380e-101
Identity = 185/313 (59.11%), Postives = 235/313 (75.08%), Query Frame = 2 
Query:  308 QVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKGAMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAI----------VW----EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSPINT-EVPSPSS 1201
            Q+L +S++ LIP++ +   P   +FD+ AN+CST+  +  VVL MDA+GF AI  LW VCARQL+ VRKQFNEYE M+ TL  +T+ L SY  +V  +L  + V  RRV++          +W    EP  MK+ G+ EYL+S+T+GF+++PSPAQLKA+LAEQLSV QLR EFRRYI+TKVAQEL+DFYLDSLDREEV  +F RQA TMRIVDQYI+EGA DQVN+SG CRE IL+TDVTA+DIFD AR EVL +METNF+ DFV TEGFRRI++AS+ EQR++RLL+A G LLP    SP ++ E  +PSS
Sbjct:  116 QILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLKASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLLRAGGMLLPLGTPSPGSSYEDKTPSS 428
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FIS3_ECTSI (Similar to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 4.290e-100
Identity = 180/292 (61.64%), Postives = 214/292 (73.29%), Query Frame = 2 
Query:  422 MQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLLLLSYAAVVAIVLNGHHVYVRRVAIVW--------------EPLKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSPINTEVPSPSSPDG-VLGPLRRLPLVGRM 1252
            M   L M+A+G   I  LW VC R+L+ VRKQFNEY+ M+ TL  LTL LLSYA VV ++L G HV VRRVAI++              EP   K+ G+ EYL+S+T+GFSE+PSPAQLKA+LAEQLSV+QLR EFR+YI+TKVAQEL+DFYLDSLDREEV G+F RQA TMRIV++YIRE APDQVNIS ECRE IL+TDVTAYDIFD AR EVL +METNFQ +FV TEGFRRI DASE+E R+IRLL+A G +LP+   SP              +L  LR LPLV R+
Sbjct:    1 MYPTLGMNALGMYGICYLWFVCIRRLKSVRKQFNEYQTMKRTLLYLTLALLSYALVVVVLLAGQHVTVRRVAILYPVITTYILLWGSIREPFMKKILGDDEYLWSYTKGFSELPSPAQLKASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLLRAGG-MLPSASPSPAXXXXXXXXXXXSRLLSALRSLPLVRRL 291
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Match: D7FU02_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU02_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 1.780e-86
Identity = 141/170 (82.94%), Postives = 155/170 (91.18%), Query Frame = 2 
Query:  662 KLTGNAEYLYSFTQGFSEMPSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKGYFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRARTEVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTSP 1171
            K TG+ EYL+SFT+GFSEMPSPAQLKA+LAEQLSV+QLR EFRRYIETKVAQELVDFYLDSLDREE+K YF RQAVTMRIV QYIREGAPDQVNISGECRE+ILSTDVTAYDIFDRAR EVL +METNFQ +FVETEGFRRIVDA+E+EQR+ RLL+A GFL P+   SP
Sbjct:    3 KWTGDDEYLWSFTKGFSEMPSPAQLKASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFTRQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRENRLLRAGGFLPPDAPPSP 172
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1634.4300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTZ5_ECTSI6.630e-19684.59Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
A0A6H5K0N5_9PHAE3.380e-14865.78RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ7_ECTSI9.400e-14071.65Similar to regulator of G-protein signaling 16 n=1... [more]
A0A6H5JJQ0_9PHAE3.810e-12563.14RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ9_ECTSI4.350e-11763.70RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ6_ECTSI3.520e-11571.54Similar to regulator of G-protein signaling 16 n=1... [more]
D7FU00_ECTSI3.220e-11259.75Regulator of G-protein signaling 13 n=1 Tax=Ectoca... [more]
A0A6H5KAT5_9PHAE1.380e-10159.11RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIS3_ECTSI4.290e-10061.64Similar to retinally abundant regulator of G-prote... [more]
D7FU02_ECTSI1.780e-8682.94Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1634contigE-fasciculatus_F_contig1634:6280..12890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.5
Seed ortholog evalue5.6e-116
Seed eggNOG ortholog2880.D7FTZ7
Preferred nameRGS1
KEGG koko:K16449
GOsGO:0001101,GO:0003674,GO:0004888,GO:0004930,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005886,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0008047,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009746,GO:0009749,GO:0009756,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010182,GO:0012505,GO:0016020,GO:0023052,GO:0030234,GO:0030695,GO:0031090,GO:0031410,GO:0031982,GO:0033993,GO:0034284,GO:0038023,GO:0042127,GO:0042221,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051336,GO:0051345,GO:0051716,GO:0060089,GO:0060589,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071322,GO:0071944,GO:0097305,GO:0097708,GO:0098588,GO:0098772,GO:0098805,GO:1901700,GO:1901701
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2CNEE@1,2QVMV@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categorysignal anchor
Exons9
Model size1465
Cds size1197
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1634.4300.1prot_E-fasciculatus_F_contig1634.4300.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1634 8873..12890 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928104.1885548-UTR-E-fasciculatus_F_contig1634:6279..64441622928104.1885548-UTR-E-fasciculatus_F_contig1634:6279..6444Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 6280..6444 +
1695995821.198831-UTR-E-fasciculatus_F_contig1634:6279..64441695995821.198831-UTR-E-fasciculatus_F_contig1634:6279..6444Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 6280..6444 +
1622928104.206296-UTR-E-fasciculatus_F_contig1634:7015..71111622928104.206296-UTR-E-fasciculatus_F_contig1634:7015..7111Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 7016..7111 +
1695995821.2233837-UTR-E-fasciculatus_F_contig1634:7015..71111695995821.2233837-UTR-E-fasciculatus_F_contig1634:7015..7111Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 7016..7111 +
1622928104.221948-UTR-E-fasciculatus_F_contig1634:8865..88721622928104.221948-UTR-E-fasciculatus_F_contig1634:8865..8872Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 8866..8872 +
1695995821.234709-UTR-E-fasciculatus_F_contig1634:8865..88721695995821.234709-UTR-E-fasciculatus_F_contig1634:8865..8872Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1634 8866..8872 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928104.2447534-CDS-E-fasciculatus_F_contig1634:8872..90811622928104.2447534-CDS-E-fasciculatus_F_contig1634:8872..9081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 8873..9081 +
1695995821.247033-CDS-E-fasciculatus_F_contig1634:8872..90811695995821.247033-CDS-E-fasciculatus_F_contig1634:8872..9081Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 8873..9081 +
1622928104.2629325-CDS-E-fasciculatus_F_contig1634:9913..100801622928104.2629325-CDS-E-fasciculatus_F_contig1634:9913..10080Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 9914..10080 +
1695995821.2587836-CDS-E-fasciculatus_F_contig1634:9913..100801695995821.2587836-CDS-E-fasciculatus_F_contig1634:9913..10080Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 9914..10080 +
1622928104.2797227-CDS-E-fasciculatus_F_contig1634:10375..104641622928104.2797227-CDS-E-fasciculatus_F_contig1634:10375..10464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 10376..10464 +
1695995821.267315-CDS-E-fasciculatus_F_contig1634:10375..104641695995821.267315-CDS-E-fasciculatus_F_contig1634:10375..10464Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 10376..10464 +
1622928104.2996328-CDS-E-fasciculatus_F_contig1634:11096..112461622928104.2996328-CDS-E-fasciculatus_F_contig1634:11096..11246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 11097..11246 +
1695995821.275295-CDS-E-fasciculatus_F_contig1634:11096..112461695995821.275295-CDS-E-fasciculatus_F_contig1634:11096..11246Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 11097..11246 +
1622928104.319922-CDS-E-fasciculatus_F_contig1634:11860..119141622928104.319922-CDS-E-fasciculatus_F_contig1634:11860..11914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 11861..11914 +
1695995821.28391-CDS-E-fasciculatus_F_contig1634:11860..119141695995821.28391-CDS-E-fasciculatus_F_contig1634:11860..11914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 11861..11914 +
1622928104.3336003-CDS-E-fasciculatus_F_contig1634:12110..122121622928104.3336003-CDS-E-fasciculatus_F_contig1634:12110..12212Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 12111..12212 +
1695995821.2925456-CDS-E-fasciculatus_F_contig1634:12110..122121695995821.2925456-CDS-E-fasciculatus_F_contig1634:12110..12212Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 12111..12212 +
1622928104.3479989-CDS-E-fasciculatus_F_contig1634:12464..128901622928104.3479989-CDS-E-fasciculatus_F_contig1634:12464..12890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 12465..12890 +
1695995821.3013263-CDS-E-fasciculatus_F_contig1634:12464..128901695995821.3013263-CDS-E-fasciculatus_F_contig1634:12464..12890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1634 12465..12890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1634.4300.1

>prot_E-fasciculatus_F_contig1634.4300.1 ID=prot_E-fasciculatus_F_contig1634.4300.1|Name=mRNA_E-fasciculatus_F_contig1634.4300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=399bp
MPPRRFQPRLFRIQVLLLSTVGLIPLLLSILDPGLYFFDQTANSCSTSKG
AMQVVLAMDAVGFSAILCLWLVCARQLRGVRKQFNEYEAMRWTLSCLTLL
LLSYAAVVAIVLNGHHVYVRRVAIVWEPLKMKLTGNAEYLYSFTQGFSEM
PSPAQLKANLAEQLSVQQLRVEFRRYIETKVAQELVDFYLDSLDREEVKG
YFPRQAVTMRIVDQYIREGAPDQVNISGECREDILSTDVTAYDIFDRART
EVLDLMETNFQTDFVETEGFRRIVDASEMEQRQIRLLQAEGFLLPNTVTS
PINTEVPSPSSPDGVLGPLRRLPLVGRMFVSSSLGPAGTSHSTAAPQDAG
TGGGEGGKGLGNTGSRSTQGEEEGRDEDGDLGVADTDGGNGPGGGGAL*
back to top

mRNA from alignment at E-fasciculatus_F_contig1634:6280..12890+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1634.4300.1 ID=mRNA_E-fasciculatus_F_contig1634.4300.1|Name=mRNA_E-fasciculatus_F_contig1634.4300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6611bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1634:6280..12890+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGGACGAACGACGGTGGGAGCCTTTAGCCATGGCAGATTTCTTCGT
GCTGGGGATGGTGGGCACATGCCAAGCCTTTGCCCTGGGCGTGTGCGTCC
ATCTAATTCGTTGGCGGAAGTGGCCCCCGTACGTCACCAAGAACGTCGAC
ATGGTCATCATCATGGTGAGTACGCGAATGAAACAAGCCAACTGCTGTCG
TCGTCGTCGTCGTCGTCGTCGTCATTGCCGTGGCCGATGTGTGAGCGTCG
TCGTGGTGTTCGGCTGTTACCGTCACCGTTTTATGTAGTTGAAGAATCTT
TTACGTTCTGTTCGACGATGGAGAACTCAATTTTGTACACACCAACGGTT
GGTGCGTCCGGTAGTTTCGATTGTCCTGCTGGCCCACCACCTTGCCGGTT
TCTCGAGAAATCAACCTGCTTCCTCCGCGCCGTCCTGTTTGCGTGCAGTA
CGTTGTGAACTGGTTTTCCCGGAATTCTCTCTCGCTGGTCGTGTCAGTAT
TCGTCTCAGCCTCCATCTCAAGCTCTGTCTCTATCTCTACCTGTATCTCG
TAGCTCAACTTCTGTCTCTATGCCCCTCCACCGCTAAATAGTCCTGTACC
CGTGTCGCTCTCACCCTCTCCTCTTCCCTTGCCTTCTCGCTCCACATGAC
TCCCCAAGTGCGTTCCATGTCGATCTATCTGCCTCTCGATGCCTCTTCCT
CTTCATTCGTGGTTTCCTCTACCCTTGAACGTGCAGACATTCGCGGGTTT
CGCATGGACATTTGCGACGGCGGTAGAAACCGGCCTTATCAAGAGGAGCG
AAGGCGATTTCCTCGCCAACTGCTACTTTGAGGTACGTGTATTTCGCACG
GTCACAGCATACGGCATTGGGTGGGTTCAGCCAATACGAATCGATTGCCT
TTCCCTAGGCCACTCTCGCCTCGCCTCAGTTTCCAAAGGCCACGTGACCA
GAGTGACAGGGAATAAAATTGCATTGTCAGGTGAATCCATCATTGTTGCG
AACATTACTACCACAGAGACGGTGAGCGTATTGGTTTTGTGGAGCGACCA
GATACAGCACAATCTTAGGCCACTTGCTGCGTAGTCTTTTTTTGGGCTGT
CTCTTTTTTCAAAAAGGGACAACTGACCAAGAACCACTTGTTACGTGGTC
TTTTTTTGCATTTTTGGACCTCCCGAAAAGGGACAGCGAATAAAGATCAC
CCCATCCTGTCCCTTTTTGGGCAACTTTGTGACAGGGTTGGCCTGTCCAA
AAATGTTGTCCTTTTTGAGAGGTGGGTGATTTTTGTGGCATGCTGCCGAC
ACTTGCCACCTCAGCTCCCTACGTGCCTCCCATCGCCCCGTGGTCTCCAT
AAGCCGCCGCGTAAGAAGAAGGATGCACACAGCCCGCGGCGCATACCCTT
GTCATTGCTGCTGCTTCACTCTGTGCAGGGAAATCACCGGAAAACCTAGT
GGGGGAAGGTACATGTTGTAGGACATGTATGTATGCAAACGATGCCCAAC
GGCTGTTGATTCTTTTTTGTTTATGAGAAGGGAAAAAAAAGGCGTCGGGC
ACTGCTGTAACAAGTGGGCTGTCCTTTTCCTTATCCTTTTTTGGGTGGTC
ACTTTTTGAGAAAAGAAACAGCCCAAAAAAAGACCACATAACAGGTGGCT
TTTAACCGTGTCAGTTTTCGTTTTCAAGTCAAAGGCGGGCGGTCGGCGAG
TTTATGGTGGGCACGTGGGCACACATACCACGATAAGGTTGTGGAATGAA
ACAACTCCGAAGCGATATTCCGGGACCACGCGACTCGAGGTTTTGTTCCG
GTTGCCATCGGGTTCGCCCTGTCTCGAGGTCGTACGTCAACTATAGCCCG
AGCTTTGATGGTCGCCCTAACCTTGGTTTCTGCTCAAGGCTGGAGCCGGC
TGCTCGGTGGTAGAATCTTTCGTGCGGCCCGGGGGCGCCTTCGTCTCGAG
TGCGTAGCGGACAAGGGCTTCCTTGGTGAAAATTCGTCACCAATTTCATT
CCGGGTGTGTGCACGTATTTCTCTCTCTCTGTCTACACCACCTGCTCGTT
AGCCGACCGTCGTTTCCAACGTTCTGTGTGCTGGGCTCCCCGTCTCCCCC
GCCCCTGCTTGCCCTGCTCGCCTTGCTTCTCTTGCCCAAGGTCTCTATTT
CGTGGACGACACTTTTGGCGCATTTCATGTCGTTTGTCGTTCGGGTGTAC
AGGATGTGGAGGATATTGATCAAGCACGACGAGAACATGTGGCGAGCAGA
GTGAGCTCACCTAGGTATCGGCGGTGGTCGAGTTCTGACTCTGTCTCACA
CTAAACCGCCCATGGGACACCCATGGGACACCCATGGGGCACCCATGGGC
ACTTCATGGGCTGCCCATGGGTGCTCCATGGGTTTCCCATGGGCAGTTAA
ACAAAAATAGAAAGTGTGGGACCCGGTTCTGAGGAAGAGAAACCATCACA
ATGTTTTGTTGGTCGAACGGCTGGGTGTTACCTTCAGTGCCAGCCCGAAG
TGCTTCCAACGGAGGCATCGGGGCGTTTTGGTTGTGTTTCTGCATTCCAC
GGTGTAAACGTGTACTTCTGTTAACATTATCGAAAGCCAGCAGATGCCGC
CCCGACGTTTCCAACCTCGACTCTTCAGGATCCAGGTGCTGCTACTGTCG
ACTGTCGGCCTCATACCCCTGCTGCTGTCCATCCTGGACCCAGGACTGTA
CTTCTTCGATCAAACTGCCAACTCCTGCAGCACCTCGAAGGGCGCGATGC
AGGTGGTGTTGGCCATGGACGCTGTCGGATTCTCCGCTATATTATGCCTT
TGGTGAGGGAAAGGAGTACGGTGGTGTTGGGTTGATTTTCGAGGTCAAGA
GATTGGGTCGACATACTTGCAGTCAGTTTTAATTGTTGGGTGGCTTCGTG
TGTAGACTATATTCGTACGAATTGTTGTCAAATATTTTCTGATATCGTTA
TACATTTCTTGCCGTCCGGGCGCACCTTACGGCAATAGAAAGTGGGTGGT
CCACCTGCTGGGTCGTCGCTCAAGGCGTTGCGTCATAATCCTTCTCCTTG
CCCCAGGTCGTACTTCATGTGAATGGCGAGAACGACGCAGAAGCTCCGTT
ACGTTGTAGGCCGTAAAATGGAAAGCGGGTTTTGCGTATTGGAGAAGCTG
TTCTTTATTTCGTGGTCATGGGACGGTGCCACCCTTTCTAACGCAGAGCT
CCGAGCCGCCGTTGGTCAAGCAAAACAATTCTTGGCGTTAAACACCATGG
TCATTAGAGTCCGAAACGGTCGAGATCTGATTCTCTTGAACGCGTGTGCT
CACGAGCCAGGACACGCTTGCGACAATTTGCTCAATACGAGACAGAGCAC
AAGTCGCAGCAAATAGGTATCGTTGGTGTGCTTCTGATATTCGCTCTCAT
GTGTGTTGGTTGGGAATTGAAAAGAGCAATACAAGGCAAAGGTCTATGCT
CCCAAGATGGTTGCTCTCTGTTCCAAACATTTTAAGTCGACGTGGAACGT
GTAGATGCGACACCATCATCGTTGTTATTGTCGTCGTAGTTTGGTGTTTC
TGGAGGGCATTCCGTACACTATACGTTTCTCAAACCCCGGTCTTTCATTG
ACTGACCTTCTCTCTTCTGGTGCTGCGAACACAGGCTTGTGTGTGCCCGT
CAGCTGAGGGGTGTCCGGAAACAGTTCAACGAATATGAGGCAATGAGGTG
GACCCTGTCATGCCTCACCCTCCTCCTGCTCAGCTACGCGGCCGTGGTGG
CAATAGTTCTCAACGGCCACCACGTTTACGTCAGAAGAGTGGCCATCGTT
TGTGAGTCGATTTCCTCGTTGGTGTCGCCTTCAAGCTTACTGCCGTGTGC
TTTGTTGTGTGACCATCGTTCGTGAGAGTTTACGTCCTGGTCTCACGAGT
AGCGATTCACGTTTCAGCGTTTGATCTGGAGCAATTTATTCATCCTCGTG
CAACACACGTTGCTAGCGATAAAACCCTGGTAATCCATCGTGGTGATAGT
CAATGCTTGTCGTTTGCATCCCTGTACCCCCTCTCCCACCGTGCCACGAG
GCAGACCCGGTGTTGTCGACGTACACGCTGCTATGGGGTTCCATAGGGGA
GCCGTTGAAGATGAAGCTGACAGGAAACGCGGAGTACTTGTACTCGTTCA
CTCAGGGCTTCTCCGAGATGCCTTCGCCTGCGCAGGTTCGGGAACCGTCC
CTCACGACGCGTGGTTTCAGAAAATTGTTTGTTCTTGTTGCGTATAGGTA
GGTAACTAACGTAGTTATGCGGCATTTTGCGTGTCAGTCAATGGTCGTGT
CGCGATTCACGCAGCATGTTGCTCTCGCCCTGGTGTGACAGATGTGTAGA
CGGGTGCATGTCTGCATCAGCATTCTCTGTACTTTGCTCCGCCTTATGTT
CCCGACTAGGTAGGTAAATCGCTTCGTTTTAGTTTATAACCAGTCTATTC
TAAACACACCTTGCGGAATCATCGTGTTTTCATATTCCAATGAAAGTTGT
TCGTGGGTTGGATCGTATGCACAAGGGTCCGAAGAATTGGCAGCATATAT
CAACATTGGCCAATCCTTTGAACGGAGTTTCCCCCCCCATTCATTGTATA
GACATTGCGCGTTTACCTCGGCCTGCAGACTACCGCATTTGTATTTAACC
CAAAGTTCGAGGATGGACGCACTTCACACTCCTGCCCCACAAACGTTCAG
TTGGACATCAGCGGAGTGGTTCACGTCTTTTCCGTTGAAAGAGACCCAAA
CTGAGGACATCCTCAACACATCCCGAGCTGAAACACACCGTACTCTGGTC
CTCTGTCCTATACCTAGCTCAAAGCCAATTTGGCGGAGCAGCTATCCGTA
CAGCAACTTCGGGTCGAATTTCGGAGATACATCGAGACTAAGGTGGCCCA
AGAGCTGGTGGACTTTTACCTCGATTCGCTAGACAGGGAGGAGGTCAAGG
GCTACTTCCCCAGACAGGTAAAGTGTTAGCGGCAGGACGCTTCCCAGAAC
GCTCTCTGTTTGGTCTTGGGGGTATGCGTGTTTCGTCCACTTCGCCCACC
CACGAAACGACAAGATAGCTTAGGATATGGTCTTACGCCCAGGATCCACG
CCGGTTCCGGAGTCCACACGTTGGATCAAGGGCTATGGATAGGCGGCGAG
TTGGTTGATCATACGGTGTTGCAACCGGTCATCGATTTATACAACTTCCT
TCAACAAGTCGGAGTGGCATGTCGACAATTATCGATGGGGAATTTCAATG
CCAGGTTATCGGAATCGGATATCGATGCATGCATGTGTATGTCTATCGAT
GAATTTGCTTGCCAAAATAGACGACGCTACTGTCAACTACGGTATATTTT
CTTCCGTCCAGAAGTGCATAGTTGATATTGGGGGCGATGTTGTTCTTCGA
TGGCTGATACGAAACAGATACCTGCCGACGACCTATCTCCCTAATTGGAA
ACGTAGTTCGTCTTCTGCAGTGTGTTGGACCACTGAGAATTGGAGAGCAC
GATTGACGAAAAGGCCCCCTCACGAGCACGTCATCGTAGTTCCCTTCTGT
CATTCCCCCATGCCCCACTTTTCGCGTGCAGGCGGTGACAATGCGCATTG
TGGACCAGTACATCAGGGAAGGGGCCCCCGACCAGGTGCAGAGACAATAT
TCTTCCACGTGTTCATTTTTCTTTTTCGACATCGACACGCTTCATGTAGC
CTGCACACATGCACGAGCCACCCCCCCCCCCCCCCCTCGCCTTCACCGTC
CCCCTACGTGCACGGAAACTTATGAGGGGCTCGCTGGCTTCTTGGCTGGG
TGATCCTGGTACATACTTCTTGCATTCGTAGGTCAACATATCCGGGGAGT
GTCGGGAGGATATTTTGTCGACGGACGTGACGGCCTACGACATCTTCGAC
CGCGCTAGGACCGAGGTTTTGGACCTTATGGAGGTATGAATGGAAGGAGA
GGAGTCCGTTTATAAAGGCGAAGTCTGCAACCCCCCCTTCCTCTCGGTAG
GTTGCAGTCCGGCATCTGACGCCGTCACCTCACATCCATTATTCAACCGG
TCACGTACAGCTAACGTCCACGACCGACACACGTCTTCGGGCAATTCTGC
CTCTCACTTCATACTTTTCTCCCGTCCCCCCTCTCCGCGTGCGACCCTGT
CGCTGCTCCAACCACAATGATAACGACGAGGGTAGACCAACTTCCAGACC
GATTTCGTCGAGACGGAGGGGTTCCGGCGCATCGTCGATGCATCCGAGAT
GGAGCAGAGACAGATCCGTCTCCTTCAGGCTGAGGGTTTCTTGCTGCCGA
ATACCGTGACCTCACCGATTAACACAGAGGTTCCCTCTCCTTCCAGTCCG
GACGGTGTGCTGGGCCCGCTCAGGCGGTTGCCCTTGGTCGGACGGATGTT
TGTTTCGTCTTCCTTAGGACCAGCGGGCACTTCGCACTCTACGGCAGCAC
CTCAGGATGCCGGCACCGGGGGCGGAGAGGGGGGCAAAGGTCTTGGTAAC
ACCGGGAGCAGGAGCACTCAGGGCGAGGAAGAAGGGCGGGATGAGGATGG
CGACCTGGGCGTTGCTGACACCGATGGCGGCAATGGACCCGGTGGCGGTG
GTGCCTTGTAA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1634:6280..12890+

>mRNA_E-fasciculatus_F_contig1634.4300.1 ID=mRNA_E-fasciculatus_F_contig1634.4300.1|Name=mRNA_E-fasciculatus_F_contig1634.4300.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2394bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1634:6280..12890+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCCCCGACGTTTCCAACCTCGACTCTTCAGGATCCAGGTGCTGCT
ACTGTCGACTGTCGGCCTCATACCCCTGCTGCTGTCCATCCTGGACCCAG
GACTGTACTTCTTCGATCAAACTGCCAACTCCTGCAGCACCTCGAAGGGC
GCGATGCAGGTGGTGTTGGCCATGGACGCTGTCGGATTCTCCGCTATATT
ATGCCTTTGATGCCGCCCCGACGTTTCCAACCTCGACTCTTCAGGATCCA
GGTGCTGCTACTGTCGACTGTCGGCCTCATACCCCTGCTGCTGTCCATCC
TGGACCCAGGACTGTACTTCTTCGATCAAACTGCCAACTCCTGCAGCACC
TCGAAGGGCGCGATGCAGGTGGTGTTGGCCATGGACGCTGTCGGATTCTC
CGCTATATTATGCCTTTGGCTTGTGTGTGCCCGTCAGCTGAGGGGTGTCC
GGAAACAGTTCAACGAATATGAGGCAATGAGGTGGACCCTGTCATGCCTC
ACCCTCCTCCTGCTCAGCTACGCGGCCGTGGTGGCAATAGTTCTCAACGG
CCACCACGTTTACGTCAGAAGAGTGGCCATCGTTTGCTTGTGTGTGCCCG
TCAGCTGAGGGGTGTCCGGAAACAGTTCAACGAATATGAGGCAATGAGGT
GGACCCTGTCATGCCTCACCCTCCTCCTGCTCAGCTACGCGGCCGTGGTG
GCAATAGTTCTCAACGGCCACCACGTTTACGTCAGAAGAGTGGCCATCGT
TTGGGAGCCGTTGAAGATGAAGCTGACAGGAAACGCGGAGTACTTGTACT
CGTTCACTCAGGGCTTCTCCGAGATGCCTTCGCCTGCGCAGGGGAGCCGT
TGAAGATGAAGCTGACAGGAAACGCGGAGTACTTGTACTCGTTCACTCAG
GGCTTCTCCGAGATGCCTTCGCCTGCGCAGCTCAAAGCCAATTTGGCGGA
GCAGCTATCCGTACAGCAACTTCGGGTCGAATTTCGGAGATACATCGAGA
CTAAGGTGGCCCAAGAGCTGGTGGACTTTTACCTCGATTCGCTAGACAGG
GAGGAGGTCAAGGGCTACTTCCCCAGACAGCTCAAAGCCAATTTGGCGGA
GCAGCTATCCGTACAGCAACTTCGGGTCGAATTTCGGAGATACATCGAGA
CTAAGGTGGCCCAAGAGCTGGTGGACTTTTACCTCGATTCGCTAGACAGG
GAGGAGGTCAAGGGCTACTTCCCCAGACAGGCGGTGACAATGCGCATTGT
GGACCAGTACATCAGGGAAGGGGCCCCCGACCAGGCGGTGACAATGCGCA
TTGTGGACCAGTACATCAGGGAAGGGGCCCCCGACCAGGTCAACATATCC
GGGGAGTGTCGGGAGGATATTTTGTCGACGGACGTGACGGCCTACGACAT
CTTCGACCGCGCTAGGACCGAGGTTTTGGACCTTATGGAGGTCAACATAT
CCGGGGAGTGTCGGGAGGATATTTTGTCGACGGACGTGACGGCCTACGAC
ATCTTCGACCGCGCTAGGACCGAGGTTTTGGACCTTATGGAGACCAACTT
CCAGACCGATTTCGTCGAGACGGAGGGGTTCCGGCGCATCGTCGATGCAT
CCGAGATGGAGCAGAGACAGATCCGTCTCCTTCAGGCTGAGGGTTTCTTG
CTGCCGAATACCGTGACCTCACCGATTAACACAGAGGTTCCCTCTCCTTC
CAGTCCGGACGGTGTGCTGGGCCCGCTCAGGCGGTTGCCCTTGGTCGGAC
GGATGTTTGTTTCGTCTTCCTTAGGACCAGCGGGCACTTCGCACTCTACG
GCAGCACCTCAGGATGCCGGCACCGGGGGCGGAGAGGGGGGCAAAGGTCT
TGGTAACACCGGGAGCAGGAGCACTCAGGGCGAGGAAGAAGGGCGGGATG
AGGATGGCGACCTGGGCGTTGCTGACACCGATGGCGGCAATGGACCCGGT
GGCGGTGGTGCCTTGTAAACCAACTTCCAGACCGATTTCGTCGAGACGGA
GGGGTTCCGGCGCATCGTCGATGCATCCGAGATGGAGCAGAGACAGATCC
GTCTCCTTCAGGCTGAGGGTTTCTTGCTGCCGAATACCGTGACCTCACCG
ATTAACACAGAGGTTCCCTCTCCTTCCAGTCCGGACGGTGTGCTGGGCCC
GCTCAGGCGGTTGCCCTTGGTCGGACGGATGTTTGTTTCGTCTTCCTTAG
GACCAGCGGGCACTTCGCACTCTACGGCAGCACCTCAGGATGCCGGCACC
GGGGGCGGAGAGGGGGGCAAAGGTCTTGGTAACACCGGGAGCAGGAGCAC
TCAGGGCGAGGAAGAAGGGCGGGATGAGGATGGCGACCTGGGCGTTGCTG
ACACCGATGGCGGCAATGGACCCGGTGGCGGTGGTGCCTTGTAA
back to top