mRNA_E-fasciculatus_F_contig16324.4294.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16324.4294.1
Unique NamemRNA_E-fasciculatus_F_contig16324.4294.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A6H5K5I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I4_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.230e-24
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEVREGAHS--CC 156
            TSE+GLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALE DGMEVRE ++S  CC
Sbjct:   83 TSEEGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALEADGMEVREESYSSFCC 136
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: D7FJZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ4_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.440e-18
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGME 129
            TSE+GLPHRCVEVVYMTTLLRDGYGFPEHSRNV YALE  GME
Sbjct:  423 TSEEGLPHRCVEVVYMTTLLRDGYGFPEHSRNVAYALEAGGME 465
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A835YRC7_9STRA (Nucleoside phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRC7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.380e-14
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            TS++GL +RCVE VYM TLLRD YGFPEH RN+T+ALE +GMEV
Sbjct:  634 TSKRGLAYRCVESVYMVTLLRDAYGFPEHGRNITFALEANGMEV 677
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A7S1BDR4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDR4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.760e-10
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T  + LPHRC+EVVYMT LLRDGYG    SR +TYA +  G+EV
Sbjct:  333 TDTQTLPHRCLEVVYMTVLLRDGYGIDPSSRGITYAFDVGGLEV 376
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A7S2UAP1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAP1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.400e-9
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T  + LPHRC+E VYM TLLRDG+GF   SR++T+  E +G EV
Sbjct:  477 TRAEVLPHRCIESVYMVTLLRDGFGFDSSSRDITFTFEVEGSEV 520
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: W7UB26_9STRA (Ectonucleoside triphosphate diphosphohydrolase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UB26_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.360e-9
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T +  LP+RC EVVY+ TLL+ GYGFP  SR+VT+ L+ +GMEV
Sbjct:  573 TRDDLLPYRCAEVVYIHTLLKHGYGFPGDSRDVTFVLDIEGMEV 616
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A1Z5K914_FISSO (Golgi apyrase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K914_FISSO)

HSP 1 Score: 58.9 bits (141), Expect = 8.660e-9
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEVREG 141
            TS + LPHRC+E VY+ TLLRDG+GF   SR++T+    DG EV  G
Sbjct:  423 TSNEVLPHRCLESVYLVTLLRDGFGFSMDSRDITFTFLVDGNEVEWG 469
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A7S1ZUU4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUU4_TRICV)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T  + LPHRC+E VY+ TLLRDG+GF   SR++T+    DG EV
Sbjct:  411 TRAEVLPHRCIEAVYLVTLLRDGFGFKPKSRDITFTFHVDGNEV 454
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: B7FXH1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXH1_PHATC)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T  + LPHRC+E VYM TLLRDG+GF   SR++T+    DG EV
Sbjct:  471 TRAEVLPHRCLEAVYMVTLLRDGFGFAPESRDITFTFLVDGSEV 514
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BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Match: A0A7S3L1H8_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1H8_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.220e-8
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 1 
Query:    1 TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEV 132
            T  + LPHRC+E VY+ TLLRDG+GF   SR++T+    DG EV
Sbjct:  472 TKAETLPHRCMEAVYIVTLLRDGFGFAPESRDITFTFLVDGSEV 515
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16324.4294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5K5I4_9PHAE1.230e-2487.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJZ4_ECTSI1.440e-1890.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YRC7_9STRA2.380e-1472.73Nucleoside phosphatase family-domain-containing pr... [more]
A0A7S1BDR4_9STRA3.760e-1061.36Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2UAP1_9STRA3.400e-956.82Hypothetical protein n=1 Tax=Attheya septentrional... [more]
W7UB26_9STRA6.360e-959.09Ectonucleoside triphosphate diphosphohydrolase 1 n... [more]
A0A1Z5K914_FISSO8.660e-955.32Golgi apyrase n=2 Tax=Fistulifera solaris TaxID=15... [more]
A0A7S1ZUU4_TRICV1.190e-854.55Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B7FXH1_PHATC1.190e-856.82Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L1H8_9STRA2.220e-854.55Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16324contigE-fasciculatus_F_contig16324:148..306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.0
Seed ortholog evalue2.8e-15
Seed eggNOG ortholog2880.D7FJZ4
Preferred nameENTPD7
KEGG rclassRC00002
KEGG koko:K01510,ko:K01511,ko:K12305,ko:K14642,ko:K14643
KEGG ReactionR00086,R00122,R00155,R00159,R00328,R00335,R00514,R00569,R00719,R00961,R02092,R02095
KEGG Pathwayko00230,ko00240,ko04142,ko05169,map00230,map00240,map04142,map05169
GOsGO:0000003,GO:0000139,GO:0000421,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0004382,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005776,GO:0005794,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006213,GO:0006220,GO:0006244,GO:0006256,GO:0006464,GO:0006486,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007548,GO:0008150,GO:0008152,GO:0008406,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009126,GO:0009128,GO:0009132,GO:0009134,GO:0009135,GO:0009137,GO:0009138,GO:0009140,GO:0009141,GO:0009143,GO:0009144,GO:0009147,GO:0009150,GO:0009154,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009167,GO:0009169,GO:0009179,GO:0009181,GO:0009185,GO:0009191,GO:0009193,GO:0009195,GO:0009199,GO:0009203,GO:0009205,GO:0009208,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009653,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010559,GO:0010560,GO:0010604,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017110,GO:0017111,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0022414,GO:0030139,GO:0030173,GO:0030334,GO:0030659,GO:0030666,GO:0031090,GO:0031166,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031310,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034656,GO:0035262,GO:0036211,GO:0036384,GO:0040012,GO:0042278,GO:0042454,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043262,GO:0043273,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045134,GO:0045137,GO:0046031,GO:0046032,GO:0046034,GO:0046036,GO:0046039,GO:0046048,GO:0046128,GO:0046130,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046710,GO:0046712,GO:0047429,GO:0048471,GO:0048513,GO:0048518,GO:0048522,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051270,GO:0055086,GO:0060049,GO:0060050,GO:0060255,GO:0061458,GO:0065007,GO:0070085,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0080090,GO:0097636,GO:0097637,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1903018,GO:1903020,GO:2000112,GO:2000145
EggNOG free text desc.nucleoside-diphosphatase activity
EggNOG OGsCOG5371@1,KOG1386@2759
EC3.6.1.5,3.6.1.6
COG Functional cat.GO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04090
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size159
Cds size159
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928103.7221-CDS-E-fasciculatus_F_contig16324:147..3061622928103.7221-CDS-E-fasciculatus_F_contig16324:147..306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16324 148..306 +
1695995821.0286071-CDS-E-fasciculatus_F_contig16324:147..3061695995821.0286071-CDS-E-fasciculatus_F_contig16324:147..306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16324 148..306 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16324.4294.1prot_E-fasciculatus_F_contig16324.4294.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16324 148..306 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16324.4294.1

>prot_E-fasciculatus_F_contig16324.4294.1 ID=prot_E-fasciculatus_F_contig16324.4294.1|Name=mRNA_E-fasciculatus_F_contig16324.4294.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=53bp
TSEKGLPHRCVEVVYMTTLLRDGYGFPEHSRNVTYALETDGMEVREGAHS
CC*
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mRNA from alignment at E-fasciculatus_F_contig16324:148..306+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16324.4294.1 ID=mRNA_E-fasciculatus_F_contig16324.4294.1|Name=mRNA_E-fasciculatus_F_contig16324.4294.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=159bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16324:148..306+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCTCCGAAAAGGGGCTGCCTCACCGGTGCGTGGAGGTGGTGTACATGAC
CACGCTTCTCCGGGACGGATACGGTTTTCCGGAACACTCGCGGAACGTTA
CTTACGCGCTGGAGACGGACGGGATGGAGGTGAGGGAAGGGGCACACAGC
TGCTGCTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16324:148..306+

>mRNA_E-fasciculatus_F_contig16324.4294.1 ID=mRNA_E-fasciculatus_F_contig16324.4294.1|Name=mRNA_E-fasciculatus_F_contig16324.4294.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=318bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16324:148..306+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCTCCGAAAAGGGGCTGCCTCACCGGTGCGTGGAGGTGGTGTACATGAC
CACGCTTCTCCGGGACGGATACGGTTTTCCGGAACACTCGCGGAACGTTA
CTTACGCGCTGGAGACGGACGGGATGGAGGTGAGGGAAGGGGCACACAGC
TGCTGCTGAACCTCCGAAAAGGGGCTGCCTCACCGGTGCGTGGAGGTGGT
GTACATGACCACGCTTCTCCGGGACGGATACGGTTTTCCGGAACACTCGC
GGAACGTTACTTACGCGCTGGAGACGGACGGGATGGAGGTGAGGGAAGGG
GCACACAGCTGCTGCTGA
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