mRNA_E-fasciculatus_F_contig1632.4291.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1632.4291.1
Unique NamemRNA_E-fasciculatus_F_contig1632.4291.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 683 bits (1762), Expect = 2.330e-237
Identity = 398/503 (79.13%), Postives = 416/503 (82.70%), Query Frame = 1 
Query:  460 EAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLCHPDPGAP-----LGSDAAASCQAGAL-EGQAQQRNGGGDIAGGRKFVPVGGGAVGSMETRECTAVAGGAVRSPKSGETLHILAPPADSGLVSRSCGRGVFGTARIASSDAGVTAAAAA-GQCVEDVVESGHAGPVLL-ARTKTNPLSPGPSHSAGGPHAHGESGEKILEEGELGESLGKHDHAAARHXXXXXXXXXXXXHLSQEMKVCSSWTGSARTDATSIGSDDDDDDTAVRFRRGSDGSNGCSETADMDGCTACAKGPAALGVTEQQSATKAEAAVLPPSPLAEQHNSAAAVSGVASGADGGSARPNDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLSPETSAICYACSVLSGIASYVTRPFGRFFRGFWERR-QQREQTAEGGGDREEGEGNEAAEGVVSFAPPALNTPAASHVLPTVVAA 1941
            +AFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASL HPDPG+P      G D    C+AGAL  GQAQ+R+GGGDI G RK VP G GAVGSMETRE  A AG AVRSPK G+TLH+LAPP+D G V R   RG FGTARIASSDAG TAAA A GQCVEDVVESGHAGPVLL  RTKT PLSPGP HSA GPHAHGE+GEK LE GELGESLGKHDH  A H XXXXXX     HLSQEMKV SSWTGSA+TDA SIGSDDD+DDTAVR R GS GSN CSETA +D   ACAKG AAL VTEQQ ATKA A VLP SPLAE  NSAAAVS V SGADG SAR NDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWI  HPSCPYCKGDLNVIPQENN S ET+AICYACSVLSG+ S+VT P  RFFRG WERR QQREQTAEGGGDRE GEGNEAAEGVVSFAPPAL + AA+ V P+VVAA
Sbjct:   56 QAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGSPGTTTPFGRDPGGGCRAGALVAGQAQRRSGGGDITGCRKVVPAGAGAVGSMETRESKAAAG-AVRSPKIGDTLHMLAPPSDIGQVGRGGARGAFGTARIASSDAGATAAATAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPCHSADGPHAHGENGEKHLEVGELGESLGKHDHFLACHRXXXXXXRPFHQHLSQEMKVSSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDS-KACAKGAAALLVTEQQLATKAGAEVLPLSPLAEHQNSAAAVSVVVSGADG-SARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIPQENNSSSETTAICYACSVLSGMVSFVTGPLVRFFRGIWERRRQQREQTAEGGGDREAGEGNEAAEGVVSFAPPALESSAATPVPPSVVAA 555
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 5.690e-226
Identity = 384/560 (68.57%), Postives = 401/560 (71.61%), Query Frame = 1 
Query:  289 MVAVVSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQAPGRVVPYDPKPRGVTQVNREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLCHPDPGAP-----LGSDAAASCQAGAL-EGQAQQRNGGGDIAGGRKFVPVGGGAVGSMETRECTAVAGGAVRSPKSGETLHILAPPADSGLVSRSCGRGVFGTARIASSDAGVTAAAAA-GQCVEDVVESGHAGPVLL-ARTKTNPLSPGPSHSAGGPHAHGESGEKILEEGELGESLGKHDHAAARHXXXXXXXXXXXXHLSQEMKVCSSWTGSARTDATSIGSDDDDDDTAVRFRRGSDGSNGCSETADMDGCTACAKGPAALGVTEQQSATKAEAAVLPPSPLAEQHNSAAAVSGVASGADGGSARPNDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLSPETSAICYACSVLSGIASYVTRPFGRFFRGFWERR-QQREQTAEGGGDREEGEGNEAAEGVVSFAPPALNTPAASHVLPTVVAA 1941
            MVAVVSQGYLCAIFVSIPP                          DPKPRGVTQ+NREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASL HPDPGAP      G DAAA CQAGAL  GQAQ+R+GGGDIAG RK VP G GAVGSMETREC A AG AVRSPKSG+TLH+LAPP+D GLV R   RGVFGTARIASSDA   AAAAA GQCVEDVVESGHAGPVLL  RTKT PLSPGPSHS  GPHAHGE+GEK LE GELGESLGKHDH +A H     XXXX   HLSQEMKVCSSWTGSA+TDA SIGSDDD+DDTAVR R                                                                         NDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIR HPSCPYCKGDLNVIPQENN S ET+AICYACSVLS + S+V  PF RFFRG WERR QQREQTAEGGGDRE GEGNEAAEGVV FAPPAL++PAA+ V P+VVAA
Sbjct:    1 MVAVVSQGYLCAIFVSIPP--------------------------DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAG-AVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRA------------------------------------------------------------------------NDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 461
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: UPI000C1CE394 (RING-H2 finger protein ATL8-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE394)

HSP 1 Score: 81.6 bits (200), Expect = 6.140e-14
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1 
Query: 1504 RVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQEN--NLSPETSAIC--YACSVLSGIASYVTRPFGRF 1773
            RV +L D CAIC+ ++A GEEV VLP C HIFH EC+D W+RSH SCP C+ +L V   +   NL   TS+    YA +    +    +RP  RF
Sbjct:  101 RVEKLAD-CAICMAEFAAGEEVRVLPQCRHIFHVECVDTWLRSHSSCPSCRENLVVSRCQKCRNLPAATSSSSSSYAATNFGALPQPASRPIDRF 194
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A4Y1RQH7_PRUDU (RING-type E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)

HSP 1 Score: 75.1 bits (183), Expect = 1.930e-12
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1 
Query: 1492 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLS 1692
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+ SH +CP C+ D+   PQ   LS
Sbjct:   46 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQHVVLS 114
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 73.2 bits (178), Expect = 3.610e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 
Query: 1528 CAICLGQYATGEEVHVLPCLHIFHAECLDVWIRSHPSCPYCKGDL 1662
            C ICL +Y  GEE+ VLPCLH FHAEC+D W++ +PSCP C+ D+
Sbjct:   47 CRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A5E4F3R2_PRUDU (RING-type E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)

HSP 1 Score: 75.1 bits (183), Expect = 4.170e-12
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1 
Query: 1492 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLS 1692
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+ SH +CP C+ D+   PQ   LS
Sbjct:   76 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQHVVLS 144
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A251NVP6_PRUPE (RING-type E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)

HSP 1 Score: 75.1 bits (183), Expect = 4.380e-12
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1 
Query: 1492 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLS 1692
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+ SH +CP C+ D+   PQ   LS
Sbjct:   78 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQHVVLS 146
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.850e-11
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 1 
Query: 1498 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRSHPSCPYCKGDLNV 1668
            V+R SEL   C++CL  Y   E V +LPC H++H EC+D+W+R H  CPYC+ D+NV
Sbjct:  312 VIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNV 368
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A6P5SY84_PRUAV (RING-type E3 ubiquitin transferase n=3 Tax=Prunus TaxID=3754 RepID=A0A6P5SY84_PRUAV)

HSP 1 Score: 73.2 bits (178), Expect = 1.950e-11
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1 
Query: 1507 VSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLS 1692
            V E  D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+ SH +CP C+ D+   PQ   LS
Sbjct:   81 VKESKDGICAVCLCEFKDGEAIRVLPACMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQHVVLS 144
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Match: A0A836CLU7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.600e-11
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 1 
Query: 1495 TVVRVSELPDVCAICLGQYATGEEVHVLPC--LHIFHAECLDVWIRSHPSCPYCKGDLNVIPQENNLSPETSAI 1710
            T V  SEL   C ICLG Y TGE +  LPC   H++H EC+++W+  H +CPYCK DL +  +E   SP  +A+
Sbjct:   64 TAVATSELQ--CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDGHSTCPYCKYDLMLAAEEEQ-SPSATAM 134
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1632.4291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT04_9PHAE2.330e-23779.13RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LAX1_ECTSI5.690e-22668.57RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI000C1CE3946.140e-1446.32RING-H2 finger protein ATL8-like n=1 Tax=Olea euro... [more]
A0A4Y1RQH7_PRUDU1.930e-1244.93RING-type E3 ubiquitin transferase n=1 Tax=Prunus ... [more]
A0A8C3ZMD8_9TELE3.610e-1260.00RING-type domain-containing protein n=1 Tax=Dentic... [more]
A0A5E4F3R2_PRUDU4.170e-1244.93RING-type E3 ubiquitin transferase n=2 Tax=Prunus ... [more]
A0A251NVP6_PRUPE4.380e-1244.93RING-type E3 ubiquitin transferase n=4 Tax=Prunus ... [more]
D8LS07_ECTSI1.850e-1150.88RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6P5SY84_PRUAV1.950e-1148.44RING-type E3 ubiquitin transferase n=3 Tax=Prunus ... [more]
A0A836CLU7_9STRA2.600e-1145.95RING-type domain-containing protein n=1 Tax=Tribon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1632contigE-fasciculatus_F_contig1632:9753..15510 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score662.9
Seed ortholog evalue1.4e-187
Seed eggNOG ortholog2880.D8LAX1
KEGG koko:K16271
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsKOG0800@1,KOG0800@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Hectar predicted targeting categorysignal peptide
Exons7
Model size2404
Cds size1860
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928103.2533035-UTR-E-fasciculatus_F_contig1632:9752..99021622928103.2533035-UTR-E-fasciculatus_F_contig1632:9752..9902Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1632 9753..9902 +
1695995820.8029313-UTR-E-fasciculatus_F_contig1632:9752..99021695995820.8029313-UTR-E-fasciculatus_F_contig1632:9752..9902Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1632 9753..9902 +
1622928103.3868911-UTR-E-fasciculatus_F_contig1632:15116..155101622928103.3868911-UTR-E-fasciculatus_F_contig1632:15116..15510Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1632 15117..15510 +
1695995820.8998413-UTR-E-fasciculatus_F_contig1632:15116..155101695995820.8998413-UTR-E-fasciculatus_F_contig1632:15116..15510Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1632 15117..15510 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928103.267194-CDS-E-fasciculatus_F_contig1632:9902..99231622928103.267194-CDS-E-fasciculatus_F_contig1632:9902..9923Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 9903..9923 +
1695995820.8191624-CDS-E-fasciculatus_F_contig1632:9902..99231695995820.8191624-CDS-E-fasciculatus_F_contig1632:9902..9923Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 9903..9923 +
1622928103.2809289-CDS-E-fasciculatus_F_contig1632:11275..114491622928103.2809289-CDS-E-fasciculatus_F_contig1632:11275..11449Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 11276..11449 +
1695995820.8341727-CDS-E-fasciculatus_F_contig1632:11275..114491695995820.8341727-CDS-E-fasciculatus_F_contig1632:11275..11449Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 11276..11449 +
1622928103.2960012-CDS-E-fasciculatus_F_contig1632:11852..119301622928103.2960012-CDS-E-fasciculatus_F_contig1632:11852..11930Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 11853..11930 +
1695995820.8476927-CDS-E-fasciculatus_F_contig1632:11852..119301695995820.8476927-CDS-E-fasciculatus_F_contig1632:11852..11930Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 11853..11930 +
1622928103.3171377-CDS-E-fasciculatus_F_contig1632:12378..124171622928103.3171377-CDS-E-fasciculatus_F_contig1632:12378..12417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 12379..12417 +
1695995820.858239-CDS-E-fasciculatus_F_contig1632:12378..124171695995820.858239-CDS-E-fasciculatus_F_contig1632:12378..12417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 12379..12417 +
1622928103.3318307-CDS-E-fasciculatus_F_contig1632:13177..143201622928103.3318307-CDS-E-fasciculatus_F_contig1632:13177..14320Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 13178..14320 +
1695995820.8686981-CDS-E-fasciculatus_F_contig1632:13177..143201695995820.8686981-CDS-E-fasciculatus_F_contig1632:13177..14320Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 13178..14320 +
1622928103.3475544-CDS-E-fasciculatus_F_contig1632:14623..149601622928103.3475544-CDS-E-fasciculatus_F_contig1632:14623..14960Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 14624..14960 +
1695995820.8794138-CDS-E-fasciculatus_F_contig1632:14623..149601695995820.8794138-CDS-E-fasciculatus_F_contig1632:14623..14960Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 14624..14960 +
1622928103.3581583-CDS-E-fasciculatus_F_contig1632:15048..151161622928103.3581583-CDS-E-fasciculatus_F_contig1632:15048..15116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 15049..15116 +
1695995820.8897212-CDS-E-fasciculatus_F_contig1632:15048..151161695995820.8897212-CDS-E-fasciculatus_F_contig1632:15048..15116Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1632 15049..15116 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1632.4291.1prot_E-fasciculatus_F_contig1632.4291.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1632 9903..15116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1632.4291.1

>prot_E-fasciculatus_F_contig1632.4291.1 ID=prot_E-fasciculatus_F_contig1632.4291.1|Name=mRNA_E-fasciculatus_F_contig1632.4291.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=620bp
MSWAAVMLFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAV
VSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQAPGRVVPYDPKPRGVTQ
VNREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLCHPDPGA
PLGSDAAASCQAGALEGQAQQRNGGGDIAGGRKFVPVGGGAVGSMETREC
TAVAGGAVRSPKSGETLHILAPPADSGLVSRSCGRGVFGTARIASSDAGV
TAAAAAGQCVEDVVESGHAGPVLLARTKTNPLSPGPSHSAGGPHAHGESG
EKILEEGELGESLGKHDHAAARHRHRHHRRRHYHRHLSQEMKVCSSWTGS
ARTDATSIGSDDDDDDTAVRFRRGSDGSNGCSETADMDGCTACAKGPAAL
GVTEQQSATKAEAAVLPPSPLAEQHNSAAAVSGVASGADGGSARPNDETV
VRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRSHPSCPYC
KGDLNVIPQENNLSPETSAICYACSVLSGIASYVTRPFGRFFRGFWERRQ
QREQTAEGGGDREEGEGNEAAEGVVSFAPPALNTPAASHVLPTVVAAWFF
FAFVFQAVCVAFTFVGMPE*
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mRNA from alignment at E-fasciculatus_F_contig1632:9753..15510+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1632.4291.1 ID=mRNA_E-fasciculatus_F_contig1632.4291.1|Name=mRNA_E-fasciculatus_F_contig1632.4291.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5758bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1632:9753..15510+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTGCACACTACAACTTGCATTGCTATCCGGGAGTCCATCTCGGCAACCAG
TACTACTGCGGTCCCACGTAGCAAAGGAGTGTCCCAGACCTACAATGGAA
CACACAAGACAAGACTGATTCTACACAGGTTGCCGAAAACAGCGAAAATC
ATGAGCTGGGCTGCAGTAATGGTGAGCATCGGATCACTGCGTTGTATCCC
TCATCGGTCGTTTTGATCCAAGCCGTTTGATCCTCTGCAAGCACCCCAAA
CCTGCGTATCATCTCATCTGTCCCGTGTGTGTACATGATCCCGCAATAAT
TTACACAGAGGAATACAGAACCCATCAAGTGCCTTTGGCCCTTCCCGTCC
GGGGAGGTCTTCTGCTGACATGAATGATCGATTAACTTCATATCTTTTGG
CTACATGTACATCGTAGATAGCCTCCGTGGAAAGACTACCGTACGTACGT
GAAATTTCCGTACGCCTGCCAGTTACACGCATCGACGCCGTCGGACGTAC
GCCGCAATGCCCGCGTGCATGCACCTCCCACCGGATGTTCATATATCCGG
GCACGTACCCAACCCACGCGATCCAAGTCCTCAACCCGGTTGCTGCATGA
TGCAGCGTGCAGTTGAGGTTTGACATGGGCCTCAATACGAAGTATACAAC
TCTCGAGATACTACAGTCTACTTCCAATAGTAAGCACGTTATTGTAAAGG
CTATGTACCGACTACAGTCATATTGGGCAAGCTTCACGTTTTTCGGCGTT
TCAGCGTTACTTTGCTCAGGCTCTGCCTTCCTCGATTCAAGTGGTGTTCA
AGTGCGTTCGCAGGAAACTCTTATCGTGCCTATTTTATATTGTTCATGGG
TTGTATAGCCTGTGGCCACCACGGTGTCAACGTCTTCCCTTCCTCGACTA
GGAAGAAGACGTTGCTGTACAGAGACCCGACCTTTTTTCTATTGTCAAGG
CAACAAAACAACAACGCATGGAATCTCTTGAACGACTTCCGGAAGTACCA
GAGAAAAGGCGTACAGCCAGCCTCAAAGCCTTGGTACGAGAAGACCGAGT
GTAACCCGCCGGGCAATTTATCGGCACGGCAAGGATACCTCTTCAATGAT
TGCCCATTATGTAGTCCGATTTTTTTCACACCTGTTGACGACCAAGTCTA
CTTGACTCTACTTGTTTGTTGCTTTGTTTCCAGCGGGTTTGACGGCTACT
ACTGTACACAGTCAAGCAGAATGCACGCGTCCTTTTCTATGTGTAAGCGT
TCGCTACAGACCATACCCACGAACCATGAACAAGAGAAATGCAACCAGGA
ATGAATAGACTAGACTGAATAGTCCAGGCTATGCAGCAACTGTGTCAAGA
TGAGATAGATAACCCCTGCGGCACGTCGAAACAGGCCGACCCACGCGATG
AGCTGACGACATGTTTTTGCCTCCTTTTCCTCTTGATCCAAACGTCACTC
CATGGGGTATGGCACACCTTGCCCGGGCATCCACGACGACGACGACGACT
ACGACGACGACAACAAATAAAAGCTGTTTGGGAGCGGCCTGATTTTCTCG
ACCGGTCTGGTGTGGTTCTTCGTTCAGGCCTGGATCTTCGCGATCGAAGC
GCAGACCGTATGGCTCATCATTCTCCTCACGGTCACGACCATGGTCGCGG
TTGTGTCGCAGGGGTACTTGTGCGCGATTTTCGTCTCCATCCCGCCGGTG
AGCGAGCGCTTTCGGAAGCACAAACAGATAGTGATTGCTGGTGTTCTCTG
CGCTGCACTGCTATCATGTTCGACGAAAAAATACACATCTGGGTTTGAGA
TCACGACTTTGGAACACTGTAGCTGCTGACAGAGAACCTGCTTGAGGTTC
ATCGGGCGCCCGCCCCACTTTCGGTAGATGTAGAGCACGGAGGGAAAGGC
GAAACACACTACGAACACCCAACCCTTCTGGAACATTTGTGTGAAAAAAC
AAGCATAAGGATACTGAAAAAGCGAGTGCCGTCAGCTTTGATCATCAACG
CTACGTAGGATTTTCAGACGTACATAGAAGTGTGTTGGCTCGGCTTCGCA
GGAAAACACACGCTCGCGCACTTTCCCTTCCGCACGACCAACCGCTACAG
TCAGGTGAAGAGGACGACCTCGTAGTTATACTGATGAGCCTTCACGATTC
TCAGGCACCTGGTCGCGTTGTTCCCTATGTGAGAGCGCTGCACCGTAGTG
TTAAGCTTGGCCTTTAGCTTTGGCCCCTATGCGTATCCCGTTCTACCAGG
TCGATGTACAGCAGGCTAACGGTGGACATAAAGGTGGAAGAAGGAACAGA
TTCTAAAATCCCCTTTGGATCGGGATGAACACAGTCTGCAGAAGTTTTAC
AATGGTTTTGCGATACTCGATTCACGACAATGCTTGGGGATTTACTGTAG
GGCCAACAACCCTTTCGTGCATGGTTTTCGTGCCAATGTGCGGCCGCTGG
CATACATCGAACTTTGGCGGAGATGCTAACTGTTCTTGAACTGTTCCGCG
TGTTGGCTGAAACACCCTTCTATCCGACCCCGCTTCCGCCTTGTACAAAA
CTTTTGGAGTTCGATCAACGCAACAATTAATTAACAAGAGACCCCAACTC
CCCCCCGTCTTTTGGTGCTAAATCAGGATCCCAAGCCTAGAGGGGTGACG
CAAGTCAACAGAGAGGTGCGTGAAGCAGTGCTGTCGGATGTCAGGGGGAA
AACATCAAAGGACCTAACACTCCCTAGCGAGAAGAAATAATGTTTTCAGA
AATCACCAACTCAGTGGCATGCAATAAACATCCTTGCCATACAGGCTTAT
GACTCTCCGTATTCTTCGCATGGGTTTTCCAATGACGAGGAGCGCAGAAA
ATGCAGCTTTCAAGCCTAACCTTGCGTTTCGCGACAAAACGCTGGAGCTG
GTAGGGTATCTGCCGCCCGTATTGCACAAAAAACATGAGCCCAAGTACAC
GCGGTTCCAGAAACGCGTTGTTGTCACTCTGTGCACAATCAATCGTGGAC
TGCACAGCTCGGCGATGTAAAACACAGGGATGGCTGTGTTTCGGGCCAAA
CGCGGCGTTCATGGGTCTTAACCAAGGTTTTAGTTTCCTCATGTACTTCA
GCAATCGTAATTACATCCCTTGTTGATGCTCCTCCTTGAACACTCTACTT
CGCAGCAATGGCTGAATCACATGCAAAAAGTTTCGTCTAACGTGTGTCAA
TCTTGGTAAAAAAGGGTCCGCGCGGCTTCCACACACTACCGTCAGCTGCC
CTATGAACTGCGGGACAAAAAAACGCGTTCGTGACAAAGCAGGCTGATCC
CTCATTTCCGTGAGCCAAACCCGCCATTCAATAACGCAGAGCACCGCCGT
TCATGCAGTCTCCCCCAGTCTCCATATGTTACCACCGCCACTGAACTACC
CCCCTCCCCCCCCGCCCGCCCGCAGGCTTTCGCTTCATTCCCCTTCGACG
CCACCGCCAGCCTCGTCCGTCGGAAAGGGTCCGGCACAAGGCCGCCGGTC
GGCTGGGAGGTTAAGTCTTCCCAGCAGCTCGCCGCCTCGCTTTGCCACCC
CGACCCCGGAGCCCCCCTCGGCAGCGACGCCGCCGCCAGTTGCCAAGCAG
GTGCCCTAGAGGGCCAAGCTCAGCAACGAAACGGCGGCGGCGACATCGCC
GGCGGTAGGAAGTTTGTACCGGTGGGGGGGGGAGCGGTGGGAAGTATGGA
AACCCGGGAGTGCACAGCGGTGGCGGGGGGGGCGGTGCGTTCGCCGAAAA
GTGGCGAGACGTTACACATATTGGCGCCGCCGGCGGATAGCGGCCTGGTG
AGCCGCAGCTGCGGGCGGGGCGTGTTTGGAACGGCAAGGATTGCGTCGTC
AGACGCCGGGGTTACGGCGGCGGCGGCAGCGGGACAATGCGTCGAAGACG
TGGTGGAGTCCGGTCACGCAGGACCGGTTCTCTTGGCCCGGACGAAGACG
AATCCGCTATCGCCAGGGCCCTCCCACTCGGCCGGCGGACCTCACGCGCA
CGGCGAGAGCGGGGAGAAAATTCTCGAGGAGGGGGAGTTGGGCGAGTCGC
TAGGCAAACACGACCACGCCGCAGCACGCCACAGGCATCGCCACCACCGC
CGCCGCCACTACCACCGGCACCTCAGCCAGGAGATGAAGGTCTGCAGCAG
CTGGACCGGGTCGGCACGAACGGACGCAACCAGCATCGGCTCCGACGACG
ACGACGACGACACGGCCGTGCGGTTCAGGCGCGGCAGCGATGGGTCGAAC
GGCTGCAGCGAAACAGCCGATATGGACGGCTGCACGGCTTGCGCCAAAGG
CCCAGCAGCGCTGGGCGTGACGGAGCAGCAATCGGCGACGAAGGCAGAGG
CCGCGGTGCTGCCGCCTTCGCCTTTGGCGGAGCAGCATAATTCGGCGGCG
GCTGTCTCCGGCGTCGCTTCCGGCGCCGACGGCGGAAGCGCCAGGCCGAA
CGACGAAACAGTGGTGCGCGTGAGCGAGCTGCCGGACGTGTGCGCGATCT
GCTTGGGGCAGTACGCCACAGGGGAGGAAGTTCACGTGCTTCCCTGCCTG
CACATATTTCACGCCGAGGTGATTGCTTGGTTCTCTCGGTCGGCAAGAGT
AATCTCGCGTGGCGGTCCGCAGCAGAACAGATCTACTGCTGCAGAAACAG
TTGCTGCTAGACTTCCACCGCTTTGTGCTCTCTGCAACTCACGGGAGTCA
TGACCTCAGCTCGCCATTATGCATCTTGTTGTTTGTCAATCGTCTGTACG
ACACCCTATAACCGCTCTTCTGGTGACGAAGCCACTAAATGCTCCAAACG
CCGCTGCGACCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCATCTATG
GACCGATCGAATCATCATCAGTGCCTGGACGTCTGGATCCGCAGTCACCC
GTCCTGCCCATACTGCAAGGGTGACCTGAACGTTATCCCGCAAGAAAACA
ATCTCTCCCCCGAGACAAGCGCCATCTGCTATGCCTGCAGCGTGCTGTCG
GGGATAGCGTCGTACGTCACCCGGCCCTTCGGTCGCTTTTTCCGCGGGTT
TTGGGAGCGGCGGCAGCAGCGAGAGCAGACGGCCGAGGGTGGCGGGGACA
GGGAGGAAGGAGAGGGGAACGAAGCCGCCGAAGGTGTTGTTAGCTTTGCT
CCACCAGCGTTGAACACTCCGGCAGCGTCACACGTTCTGCCAACTGTGGT
GGCAGCGTGAGATACTCGGCACACCTCTGTAAATGGGGCGCCTTTTCCGT
TGCTCGCTAGAAAGGGTTTACGGGTGCGATCGTTGTGATTTTCATGGGTT
TTTTTTTGCGTTTGTGTTCCAGGCAGTGTGTGTGGCGTTTACTTTTGTAG
GAATGCCTGAATAACCCCCTGATGAAGGCTCACTTACAGTTGAACCGCTT
GGAAGAGTTTTGCGTCCTGCTTCCTTGCTCCCTTTGGTAGACTGAACAAC
CGGGGCAGCGACTACACCATGAGGGATCGTTTTTTAATTCATCCCCTGCC
CGTGCTAGCCGAGTGGGCAACTCCCACCAGTATCCTATCTATAGTTCTGT
CGAAGTACTGTTGAGGCGTTCTCTCATACCTCTGAATTAGCTAGACAAAG
GGCCATCGTCGCCAACTGACCGTGCGAGCAACACGAGGTAGTGAAGAGAC
CCAAAAGGCAAGGAGCACGAGAAGATCCAGACCCAAAACGAACGACAAGG
GTCACACCCAACCCAAGATGGGCGTACGTTCAGAGCGTTTTCAGGATACA
AACCAGTC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1632:9753..15510+

>mRNA_E-fasciculatus_F_contig1632.4291.1 ID=mRNA_E-fasciculatus_F_contig1632.4291.1|Name=mRNA_E-fasciculatus_F_contig1632.4291.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3720bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1632:9753..15510+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGCTGGGCTGCAGTAATGATGAGCTGGGCTGCAGTAATGCTGTTTGG
GAGCGGCCTGATTTTCTCGACCGGTCTGGTGTGGTTCTTCGTTCAGGCCT
GGATCTTCGCGATCGAAGCGCAGACCGTATGGCTCATCATTCTCCTCACG
GTCACGACCATGGTCGCGGTTGTGTCGCAGGGGTACTTGTGCGCGATTTT
CGTCTCCATCCCGCCGCTGTTTGGGAGCGGCCTGATTTTCTCGACCGGTC
TGGTGTGGTTCTTCGTTCAGGCCTGGATCTTCGCGATCGAAGCGCAGACC
GTATGGCTCATCATTCTCCTCACGGTCACGACCATGGTCGCGGTTGTGTC
GCAGGGGTACTTGTGCGCGATTTTCGTCTCCATCCCGCCGTCAGGTGAAG
AGGACGACCTCGTAGTTATACTGATGAGCCTTCACGATTCTCAGGCACCT
GGTCGCGTTGTTCCCTATTCAGGTGAAGAGGACGACCTCGTAGTTATACT
GATGAGCCTTCACGATTCTCAGGCACCTGGTCGCGTTGTTCCCTATGATC
CCAAGCCTAGAGGGGTGACGCAAGTCAACAGAGAGGATCCCAAGCCTAGA
GGGGTGACGCAAGTCAACAGAGAGGCTTTCGCTTCATTCCCCTTCGACGC
CACCGCCAGCCTCGTCCGTCGGAAAGGGTCCGGCACAAGGCCGCCGGTCG
GCTGGGAGGTTAAGTCTTCCCAGCAGCTCGCCGCCTCGCTTTGCCACCCC
GACCCCGGAGCCCCCCTCGGCAGCGACGCCGCCGCCAGTTGCCAAGCAGG
TGCCCTAGAGGGCCAAGCTCAGCAACGAAACGGCGGCGGCGACATCGCCG
GCGGTAGGAAGTTTGTACCGGTGGGGGGGGGAGCGGTGGGAAGTATGGAA
ACCCGGGAGTGCACAGCGGTGGCGGGGGGGGCGGTGCGTTCGCCGAAAAG
TGGCGAGACGTTACACATATTGGCGCCGCCGGCGGATAGCGGCCTGGTGA
GCCGCAGCTGCGGGCGGGGCGTGTTTGGAACGGCAAGGATTGCGTCGTCA
GACGCCGGGGTTACGGCGGCGGCGGCAGCGGGACAATGCGTCGAAGACGT
GGTGGAGTCCGGTCACGCAGGACCGGTTCTCTTGGCCCGGACGAAGACGA
ATCCGCTATCGCCAGGGCCCTCCCACTCGGCCGGCGGACCTCACGCGCAC
GGCGAGAGCGGGGAGAAAATTCTCGAGGAGGGGGAGTTGGGCGAGTCGCT
AGGCAAACACGACCACGCCGCAGCACGCCACAGGCATCGCCACCACCGCC
GCCGCCACTACCACCGGCACCTCAGCCAGGAGATGAAGGTCTGCAGCAGC
TGGACCGGGTCGGCACGAACGGACGCAACCAGCATCGGCTCCGACGACGA
CGACGACGACACGGCCGTGCGGTTCAGGCGCGGCAGCGATGGGTCGAACG
GCTGCAGCGAAACAGCCGATATGGACGGCTGCACGGCTTGCGCCAAAGGC
CCAGCAGCGCTGGGCGTGACGGAGCAGCAATCGGCGACGAAGGCAGAGGC
CGCGGTGCTGCCGCCTTCGCCTTTGGCGGAGCAGCATAATTCGGCGGCGG
CTGTCTCCGGCGTCGCTTCCGGCGCCGACGGCGGAAGCGCCAGGCCGAAC
GACGAAACAGTGGTGCGCGTGAGCGAGCTGCCGGACGTGTGCGCGATCTG
CTTGGGGCAGTACGCCACAGGGGAGGAAGTTCACGTGCTTCCCTGCCTGC
ACATATTTCACGCCGAGGCTTTCGCTTCATTCCCCTTCGACGCCACCGCC
AGCCTCGTCCGTCGGAAAGGGTCCGGCACAAGGCCGCCGGTCGGCTGGGA
GGTTAAGTCTTCCCAGCAGCTCGCCGCCTCGCTTTGCCACCCCGACCCCG
GAGCCCCCCTCGGCAGCGACGCCGCCGCCAGTTGCCAAGCAGGTGCCCTA
GAGGGCCAAGCTCAGCAACGAAACGGCGGCGGCGACATCGCCGGCGGTAG
GAAGTTTGTACCGGTGGGGGGGGGAGCGGTGGGAAGTATGGAAACCCGGG
AGTGCACAGCGGTGGCGGGGGGGGCGGTGCGTTCGCCGAAAAGTGGCGAG
ACGTTACACATATTGGCGCCGCCGGCGGATAGCGGCCTGGTGAGCCGCAG
CTGCGGGCGGGGCGTGTTTGGAACGGCAAGGATTGCGTCGTCAGACGCCG
GGGTTACGGCGGCGGCGGCAGCGGGACAATGCGTCGAAGACGTGGTGGAG
TCCGGTCACGCAGGACCGGTTCTCTTGGCCCGGACGAAGACGAATCCGCT
ATCGCCAGGGCCCTCCCACTCGGCCGGCGGACCTCACGCGCACGGCGAGA
GCGGGGAGAAAATTCTCGAGGAGGGGGAGTTGGGCGAGTCGCTAGGCAAA
CACGACCACGCCGCAGCACGCCACAGGCATCGCCACCACCGCCGCCGCCA
CTACCACCGGCACCTCAGCCAGGAGATGAAGGTCTGCAGCAGCTGGACCG
GGTCGGCACGAACGGACGCAACCAGCATCGGCTCCGACGACGACGACGAC
GACACGGCCGTGCGGTTCAGGCGCGGCAGCGATGGGTCGAACGGCTGCAG
CGAAACAGCCGATATGGACGGCTGCACGGCTTGCGCCAAAGGCCCAGCAG
CGCTGGGCGTGACGGAGCAGCAATCGGCGACGAAGGCAGAGGCCGCGGTG
CTGCCGCCTTCGCCTTTGGCGGAGCAGCATAATTCGGCGGCGGCTGTCTC
CGGCGTCGCTTCCGGCGCCGACGGCGGAAGCGCCAGGCCGAACGACGAAA
CAGTGGTGCGCGTGAGCGAGCTGCCGGACGTGTGCGCGATCTGCTTGGGG
CAGTACGCCACAGGGGAGGAAGTTCACGTGCTTCCCTGCCTGCACATATT
TCACGCCGAGTGCCTGGACGTCTGGATCCGCAGTCACCCGTCCTGCCCAT
ACTGCAAGGGTGACCTGAACGTTATCCCGCAAGAAAACAATCTCTCCCCC
GAGACAAGCGCCATCTGCTATGCCTGCAGCGTGCTGTCGGGGATAGCGTC
GTACGTCACCCGGCCCTTCGGTCGCTTTTTCCGCGGGTTTTGGGAGCGGC
GGCAGCAGCGAGAGCAGACGGCCGAGGGTGGCGGGGACAGGGAGGAAGGA
GAGGGGAACGAAGCCGCCGAAGGTGTTGTTAGCTTTGCTCCACCAGCGTT
GAACACTCCGGCAGCGTCACACGTTCTGCCAACTGTGGTGGCAGCGTTGC
CTGGACGTCTGGATCCGCAGTCACCCGTCCTGCCCATACTGCAAGGGTGA
CCTGAACGTTATCCCGCAAGAAAACAATCTCTCCCCCGAGACAAGCGCCA
TCTGCTATGCCTGCAGCGTGCTGTCGGGGATAGCGTCGTACGTCACCCGG
CCCTTCGGTCGCTTTTTCCGCGGGTTTTGGGAGCGGCGGCAGCAGCGAGA
GCAGACGGCCGAGGGTGGCGGGGACAGGGAGGAAGGAGAGGGGAACGAAG
CCGCCGAAGGTGTTGTTAGCTTTGCTCCACCAGCGTTGAACACTCCGGCA
GCGTCACACGTTCTGCCAACTGTGGTGGCAGCGTGGTTTTTTTTTGCGTT
TGTGTTCCAGGCAGTGTGTGTGGCGTTTACTTTTGTAGGAATGCCTGAAT
AAGGTTTTTTTTTGCGTTTGTGTTCCAGGCAGTGTGTGTGGCGTTTACTT
TTGTAGGAATGCCTGAATAA
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