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Homology
BLAST of mRNA_E-fasciculatus_F_contig16314.4287.1 vs. uniprot
Match: D7FPK1_ECTSI (Cytochrome P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK1_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.890e-43 Identity = 87/100 (87.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 370 RTATIQRACTATTRCFQETTTMESGLELEAGTAFTLLTRYPCLSEDSFTRAKDFVPERWIDAERAKALLDQPADRDSSDVVHREEVAQAFGGGPRKCPGM 669
RTA I+RAC ATTR QETTTM+SGL+LEAGTAFTLL RYPCLSE SFTRAKDFVPERWIDAER +ALL QPADR SSDVVHREEVAQAFGGGPRKCPGM
Sbjct: 379 RTANIERACIATTRRSQETTTMKSGLKLEAGTAFTLLLRYPCLSEHSFTRAKDFVPERWIDAEREEALLGQPADRKSSDVVHREEVAQAFGGGPRKCPGM 478
BLAST of mRNA_E-fasciculatus_F_contig16314.4287.1 vs. uniprot
Match: D8LC30_ECTSI (Cytochrome P450 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC30_ECTSI) HSP 1 Score: 57.8 bits (138), Expect = 4.260e-5 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 2
Query: 2 PEMHSRCREEALRAAPLSDGLVSSSEQASQLVYCSAVFKEVLRLVPAAPLVFLHSTVGRQHAVSSSGKMRKG 217
P+ RCR EAL+ AP SDG+VS++EQ +L +C+AVFKE LRL AP L T + S ++KG
Sbjct: 369 PKAALRCRAEALKVAPESDGMVSTAEQLKRLRFCAAVFKEALRLRTPAPR--LSFTCTEDFTMKSGRVLKKG 438
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 173.7 |
| Seed ortholog evalue | 9.8e-41 |
| Seed eggNOG ortholog | 2880.D7FPK1 |
| KEGG ko | ko:K15388,ko:K21446 |
| EggNOG free text desc. | iron ion binding |
| EggNOG OGs | COG2124@1,KOG0158@2759 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01008 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1713 |
| Cds size | 687 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16314.4287.1 >prot_E-fasciculatus_F_contig16314.4287.1 ID=prot_E-fasciculatus_F_contig16314.4287.1|Name=mRNA_E-fasciculatus_F_contig16314.4287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=229bp
PRDALQVSRGGPKSGATQRWLGVFQRAGVSAGVLLRGVQGGTQACPCGTA
GVPSQHGRSTTCRIVVRKNAKRTRITGKHPLQFVAPSVVHSYATETFLSA
TKTAEPGKSIQPLRVVFGSFACARTATIQRACTATTRCFQETTTMESGLE
LEAGTAFTLLTRYPCLSEDSFTRAKDFVPERWIDAERAKALLDQPADRDS
SDVVHREEVAQAFGGGPRKCPGMVCIRV* back to topmRNA from alignment at E-fasciculatus_F_contig16314:19..2793+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig16314.4287.1 ID=mRNA_E-fasciculatus_F_contig16314.4287.1|Name=mRNA_E-fasciculatus_F_contig16314.4287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2775bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16314:19..2793+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCAGAGATGCACTCCAGGTGTCGCGAGGAGGCCCTAAGAGCGGCGCCAC
TCAGGCGAGGACCCGTTCTTGAATTACAGACTTCCCGCTTTAAGGACGTG
CATGTACTATTTTTCAAGAAATGTTGCCATGCTTTTGAAGATGTTGGTGT
CCTTGAAGCTAGCGGGCGATGTCCTTGATTTTGGCGTCCTCCAAGCGGGG
ATGACTGATGCAGTTTCTGTCGTCGTACATTATGCAAACATAGTTGTCTT
GCTCTTTCTCATTTGCAAAACTGTTTTGAGTGTTGTGGTCCACGAGTCGT
AGGGACCCTCCCACGGGTATCAGCACACGTACTCAATGTTTCCGATACCA
CCCGCTATCGGAAGGCTGTCACCCAAGCATTGCTCTCGACATTGGTACTT
GGGACAAGCAACTTCTACAGAAGGCAGTGACAGCAATATTTCCTCGATGG
AAGGGTCTCCGGGTCCTCCGTGTAGAGTATTCATATTACCGTCAGCTGTT
TACGTTCTACGTCAGCCTTGTGTCGCTGACCGCGACTGCTGTTAATTGTG
TCGATTCTGCACCCTGTTCCCTGTTCCCCGTTTTAACCGAGGCAGCGATG
GCTTGGTGTCTTCCAGCGAGCAGGCGTCTCAGCTGGTGTATTGCTCCGCG
GTGTTCAAGGAGGTACTCAGGCTTGTCCCTGCGGCACCGCTGGTGTTCCT
TCACAGCACGGTAGGTCGACAACATGCCGTATCGTCGTCAGGAAAAATGC
GAAAAGGACAAGAATAACTGGAAAACACCCCTTGCAATTCGTCGCTCCCT
CCGTGGTACATTCATACGCTACCGAGACATTCCTATCTGCTACAAAAACA
GCGGAACCTGGCAAGAGCATTCAACCGCTCCGTGTAGTATTCGGTTCATT
TGCTTGTGCAAGAACAGCGACAATCCAGAGGGCGTGCACCGCAACGACAC
GTTGCTTCCAGGAAACTACCACCATGGAGAGCGGGTTGGAACTCGAGGCC
GGCACGGCGTTCACCCTTCTCACCCGGTATCCCTGTCTTTCGGAGGACTC
ATTCACGAGGGCGAAAGACTTCGTGCCCGAAAGGTGAGCAATCTCTGTGG
GCCTCTCTCTCTCCCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGGCTGG
CTGTCATTCTCTCTCTGTGTATGTATCTGCCAAACACGTCGATGTTTTTG
CCACCGCTGTGCTCCCTAGTACCGCCGCGAGATTAATGTGCTGCGGACTG
GAAGCAAGGTCTTACTGGCTTGAGTAATCATCTCGGACGCGGCCGCTTTA
CTTGTCCAACGGAACAGCTGTTCAGCGCACTTCGTGTAGAGTGAACATCG
GGGGGCAGGGCGAGGACGAATTGGTTGATGACCATGGCTCTCCCCTACCT
CCGTTCCGTCCGTTGCTGCAAAGCAGACCCTTGGCCAAGGCTAACTTGCC
TGGAAATGATCCCTACATGCGGCCTAGTTTCTGCGCCGGGCTTGTCACAT
GCCAAGCATAAGAAACGGTCCCTTGCGGGGGTTCCCTCAGCAGCCCGTAA
TTCCACCCACTACCCTTTCGTGTGCGTGACTTTCACGGCGTTTTCCCGAA
ACAAGATGGATTGATGCCGAGCGTGCGAAGGCTCTCTTGGACCAGCCAGC
AGACCGGGACAGCAGCGATGTCGTTCACCGCGAAGAGGTAGCGCAGGCCT
TCGGCGGTGGCCCGCGTAAATGCCCCGGAATGGTATGTATTCGCGTCTGA
TACCTTCGGCTGCACCCCTTGTCATGATCGGTAGAAGCAAGGAAAAGTGT
GGTTGTGCTGTCGGCTGTTTCGTTGTTGCTGGCCGACATGAAGACGTCGG
CTTCTCCTGGTAACGGCAGTGTTCGAAGGAGCACAGACAAGCCACGGATG
AGAGAGAAAGCGAACGGCCGCACTAGACAGGGGGCCGTTGGCCGAGAACG
AGAAGGGTTCCTACCTTCCGCCATCTCATTTTGCGATTGATGAGGAAGAT
TGCGGACAACGTTACCCCAATCTCCCACAGTACGGACATAGGAAGGTACT
GGGTAGAGAGAGATCGGGCCGGTTTTTGATGTGAACACAACAACAGTACG
GGTTAGTTGTGCTAAATCGCCCCATGTGACACCCATGGGCCGCCGATGGG
CACTTGATGGACTGCCCATGAGCCGCCCATTGGCGGGCCCATGGACAGGC
CCATGAACTGTCCCATGGGCGGCCCACCGTGGGCACTTCAACCTGGAACT
CGCCACCGGCATATCAACCTAGAACTTCGCCATCGACACATCAACCTAGA
ACCTAGCCACCCAGCGCCAACCTAGCACGTATCGTGTGGGCGTAGGCCTT
GGGTTTGGGTTAGCGTTAGGGTTTTTAACCGGTAGAATGCCCGAAGCAGA
TAATCTTTTGTCAAGGAGTATTATACTGCCGGTTCCGTGCGAAGGGCACT
CATTGGCCGCTCATAGGCTGCCCATGAGCCCATGAACTACCACCATGGGC
ACCCCCTTGGGCATTTCCCATGGGCATTTCCCATGGGCGGCGCATGGGCA
TGCTCATGGGCATCCCCATGTGCAGCCCATTGGTACCCCATGGGTACCCT
ATGGGAGGTTTAACAAAACTGTAGAAAGTGTGGGAGAAACCCCTACGTTT
GACGTCCGACGTAAGTTTACTCCGCGTTTGGTTGCACCCTTCCCTCATTG
CCAGGACATGGCGCACCTCGAGGCGGCCATAATCCTCGCAGCAATATCCG
CTCGCTTCGATCTGGCTCTGGCACC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig16314:19..2793+ >mRNA_E-fasciculatus_F_contig16314.4287.1 ID=mRNA_E-fasciculatus_F_contig16314.4287.1|Name=mRNA_E-fasciculatus_F_contig16314.4287.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1374bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16314:19..2793+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCAGAGATGCACTCCAGGTGTCGCGAGGAGGCCCTAAGAGCGGCGCCAC
TCAGCCCAGAGATGCACTCCAGGTGTCGCGAGGAGGCCCTAAGAGCGGCG
CCACTCAGCGATGGCTTGGTGTCTTCCAGCGAGCAGGCGTCTCAGCTGGT
GTATTGCTCCGCGGTGTTCAAGGAGGTACTCAGGCTTGTCCCTGCGGCAC
CGCTGGTGTTCCTTCACAGCACGGTAGGTCGACAACATGCCGTATCGTCG
TCAGGAAAAATGCGAAAAGGACAAGAATAACTGGAAAACACCCCTTGCAA
TTCGTCGCTCCCTCCGTGGTACATTCATACGCTACCGAGACATTCCTATC
TGCTACAAAAACAGCGGAACCTGGCAAGAGCATTCAACCGCTCCGTGTAG
TATTCGGTTCATTTGCTTGTGCAAGAACAGCGACAATCCAGAGGGCGTGC
ACCGCAACGACACGTTGCTTCCAGGAAACTACCACCATGGAGAGCGGGTT
GGAACTCGAGGCCGGCACGGCGTTCACCCTTCTCACCCGGTATCCCTGTC
TTTCGGAGGACTCATTCACGAGGGCGAAAGACTTCGTGCCCGAAAGCGAT
GGCTTGGTGTCTTCCAGCGAGCAGGCGTCTCAGCTGGTGTATTGCTCCGC
GGTGTTCAAGGAGGTACTCAGGCTTGTCCCTGCGGCACCGCTGGTGTTCC
TTCACAGCACGGTAGGTCGACAACATGCCGTATCGTCGTCAGGAAAAATG
CGAAAAGGACAAGAATAACTGGAAAACACCCCTTGCAATTCGTCGCTCCC
TCCGTGGTACATTCATACGCTACCGAGACATTCCTATCTGCTACAAAAAC
AGCGGAACCTGGCAAGAGCATTCAACCGCTCCGTGTAGTATTCGGTTCAT
TTGCTTGTGCAAGAACAGCGACAATCCAGAGGGCGTGCACCGCAACGACA
CGTTGCTTCCAGGAAACTACCACCATGGAGAGCGGGTTGGAACTCGAGGC
CGGCACGGCGTTCACCCTTCTCACCCGGTATCCCTGTCTTTCGGAGGACT
CATTCACGAGGGCGAAAGACTTCGTGCCCGAAAGATGGATTGATGCCGAG
CGTGCGAAGGCTCTCTTGGACCAGCCAGCAGACCGGGACAGCAGCGATGT
CGTTCACCGCGAAGAGGTAGCGCAGGCCTTCGGCGGTGGCCCGCGTAAAT
GCCCCGGAATGGTATGTATTCGCGTCTGAATGGATTGATGCCGAGCGTGC
GAAGGCTCTCTTGGACCAGCCAGCAGACCGGGACAGCAGCGATGTCGTTC
ACCGCGAAGAGGTAGCGCAGGCCTTCGGCGGTGGCCCGCGTAAATGCCCC
GGAATGGTATGTATTCGCGTCTGA back to top
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