mRNA_E-fasciculatus_F_contig16309.4285.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE) HSP 1 Score: 299 bits (766), Expect = 4.880e-99 Identity = 150/169 (88.76%), Postives = 153/169 (90.53%), Query Frame = 1
Query: 37 MAKQGNGSAPNEMPVADDVSNPVHVMELIKQFDFLSIGLKGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPLREXXXXXXXXXXGAEFWAPTGGAGAMDEDG 543
M+KQGNGSAPNEMPVADD S PVHVM+LIKQFDFLSIGL+GKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEP VVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPL E GAEFW PTGGA AMDEDG
Sbjct: 1 MSKQGNGSAPNEMPVADDSSKPVHVMDLIKQFDFLSIGLRGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPLGEDTEEEDEEEHGAEFWVPTGGAEAMDEDG 169
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI) HSP 1 Score: 285 bits (730), Expect = 1.430e-93 Identity = 145/169 (85.80%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 37 MAKQGNGSAPNEMPVADDVSNPVHVMELIKQFDFLSIGLKGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPLREXXXXXXXXXXGAEFWAPTGGAGAMDEDG 543
MAKQG GSAP EMP ADD S PVHVM+LIKQFDFLSIGL GKIHCALTNRDLPLNS AVHQHLNSKKLKKEREWYNADFSKYEP VVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRY NRKAEMEGLKQAQRQPL E GAE W PTGGA AMDEDG
Sbjct: 1 MAKQGKGSAPKEMPGADDSSKPVHVMDLIKQFDFLSIGLTGKIHCALTNRDLPLNSTAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYGNRKAEMEGLKQAQRQPLGEDSEEEDQEEDGAEIWVPTGGAEAMDEDG 169
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A835YV33_9STRA (Surfeit locus protein 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV33_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.120e-31 Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 100 PVHVMELIKQFDFLSIGLKGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQ 447
P V +I Q DFLS+ GK HC +TN D+P A+ HL SKK K+R+WY+ DFSKYEP +VA+K +PKLLFC LT LNRIP+E+E HVNGKR++ AE E QA++Q
Sbjct: 34 PPEVQAIIDQHDFLSLNEHGKAHCNVTNLDIPARVDALKTHLASKKFIKQRDWYSYDFSKYEPHIVANKKDPKLLFCKLTMKPLNRIPEEIETHVNGKRFKRLVAEAEAA-QARKQ 148
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A7S2V5T7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5T7_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.730e-25 Identity = 56/136 (41.18%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 22 LSLLTMAKQGNGSAPNEMPVADDVSNPVHVMELIKQFDFLSIGLKGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGL 429
+SLL MAK G M +A + ++ L+ + K ++HC++T D+P +S +V HL SKK KK++EWY D+S++EP +V HK + +LLFCTLTR LN+IP +V+ HV GKR+ +AE E +
Sbjct: 2 VSLLNMAKDGEN-----MSLAQLIEQNKDILSLVVREG------KSRVHCSVTGHDIPPSSNSVQAHLKSKKFKKQKEWYKQDYSEFEPYIVPHKFDSRLLFCTLTRRPLNKIPNQVKKHVEGKRFIRLRAEKEKI 126
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A7R9UEL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL5_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.490e-24 Identity = 53/116 (45.69%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 73 MPVADDVSNPVHVMELIKQFDFLSIGL-KGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAE 417
+P++ D+S V +L+ + L + L + K+ C+LT ++P ++ AV +L SK +K++EWY+ADFSKYEP VVAHK + + LFC +TR LNRIPKEV+ H GKR++ K E
Sbjct: 13 LPMSADISEDVR--KLVAETACLDLDLGRRKVVCSLTRHEMPPSAPAVQAYLRSKAFRKQKEWYSADFSKYEPYVVAHKKDGRKLFCNVTRKSLNRIPKEVQRHWEGKRFQRLKVE 126
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A024G4B4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G4B4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.070e-21 Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 109 VMELIKQFDFLSI----GLKGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRY 399
V +L+ DFL + ++ C LT D+ A + QHL SK L K ++WYN DFSKY P ++ H+ PK L+C +T+ LNRIP++VE HVNGKRY
Sbjct: 5 VRQLVNSTDFLRVIETQSNGTRVQCTLTKHDMVPKEAVILQHLRSKALLKAKDWYNYDFSKYRPHIIPHRRKPKCLYCNVTQTTLNRIPEQVEKHVNGKRY 105
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: W2QB64_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QB64_PHYPN) HSP 1 Score: 94.4 bits (233), Expect = 1.820e-20 Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 1
Query: 79 VADDVSNPVHVMELIKQFDFLSIGLKG-------KIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRK 411
+A +++P V +L+KQ +FL I G ++ C LT ++ + QHL SKK K R+WY D+S+YEP +V H+ PK L+C +T LNRIP EVE HV GKRY+ K
Sbjct: 1 MASPIADPA-VQQLLKQHEFLEIVESGEGDNKRVRVKCQLTQHEMLPRVDVIEQHLKSKKFVKARDWYCHDYSQYEPYIVPHRRLPKSLYCNVTGTILNRIPSEVEKHVQGKRYKRMK 117
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A3M6VBC6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBC6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.930e-19 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 109 VMELIKQFDFLSIGLKG-------KIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRK 411
V +L+ + +L I G +I C LT ++P+ + + HL SKK K R+WY D+S+YEP +V H+ PK LFC +T LNRIP EVE HV GKRY+ K
Sbjct: 10 VQQLLSEHKYLEIIETGEGEKKRVRIKCQLTQHEMPMRTDIIATHLMSKKFLKARDWYCHDYSQYEPYIVPHRRLPKSLFCNVTNTILNRIPSEVEKHVQGKRYKRMK 117
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A484DXM0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXM0_BRELC) HSP 1 Score: 90.9 bits (224), Expect = 3.790e-19 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 100 PVHVMELIKQFDFLSI--GLKG-----KIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRK 411
P V L+ Q +FL + KG +I C +T +L + QHL SKK K R+WYN D+S+YEP +V H+ PK L+C +T LNRIP E+E HV GKRY+ K
Sbjct: 4 PPDVQHLLDQHEFLKVVESSKGDSKHLRIKCEITQHELVPCVDVIEQHLKSKKFVKARDWYNHDYSQYEPYIVPHRKLPKQLYCNVTGTVLNRIPFELEKHVQGKRYKRLK 114
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Match: A0A8K1F9L1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1F9L1_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 3.980e-19 Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 160 KIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPLVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRK 411
++ C LT+ +L AA+ +L +KK KK +EWY D+S+YEP +V+H+ PK L+C +T LNRIP EVE HVNGKR++ K
Sbjct: 34 RVRCDLTSHELLPTKAAIESYLQTKKFKKAKEWYCYDYSQYEPYIVSHRRKPKSLYCNVTNTILNRIPSEVEKHVNGKRFQRLK 117 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16309.4285.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16309.4285.1 >prot_E-fasciculatus_F_contig16309.4285.1 ID=prot_E-fasciculatus_F_contig16309.4285.1|Name=mRNA_E-fasciculatus_F_contig16309.4285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=181bp HSFELSPLSLLTMAKQGNGSAPNEMPVADDVSNPVHVMELIKQFDFLSIGback to top mRNA from alignment at E-fasciculatus_F_contig16309:919..2794+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16309.4285.1 ID=mRNA_E-fasciculatus_F_contig16309.4285.1|Name=mRNA_E-fasciculatus_F_contig16309.4285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1876bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16309:919..2794+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16309:919..2794+ >mRNA_E-fasciculatus_F_contig16309.4285.1 ID=mRNA_E-fasciculatus_F_contig16309.4285.1|Name=mRNA_E-fasciculatus_F_contig16309.4285.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1086bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16309:919..2794+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |