mRNA_E-fasciculatus_F_contig16284.4272.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D7G837_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G837_ECTSI) HSP 1 Score: 104 bits (259), Expect = 8.550e-24 Identity = 60/126 (47.62%), Postives = 66/126 (52.38%), Query Frame = 1
Query: 112 EKRDNLAKASAGFEEGGVPQAGSVDGPPRQGPPPSYEQMMTQPD--------------------------VDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
+KRDNL +A AGFEE GV QA S DGPP Q PPPSYEQ+ +P AD LGPVAKCR+RSKS+WIHFPHVELLFILYAFQ
Sbjct: 23 QKRDNLREARAGFEESGVHQAASADGPPPQEPPPSYEQVAIEPGGQXXXXXXXXXXXXXXXXXXXXXXXXXXADNVNVGAEGTRSAGGEEAGDDGLGPVAKCRDRSKSLWIHFPHVELLFILYAFQ 148
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.960e-11 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWL-QREKRDNLAKASAGFEEGGVPQ---AGSVDGPPRQGPPPSYEQ--MMTQPDVDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNLVLFL + F+I ++H+ + S EA+WL +R ++A+A + GVP + + P P S Q + T D L +A+CRERS+S+W+HFPHVEL+++L+AF+
Sbjct: 2286 FVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARA----QRRGVPVRELSARLSNPWAPFDPNSESQRSLRTAKTSGDDEGEADDTDAEEGMPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFE 2420
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.620e-10 Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 1
Query: 319 LGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
LGPVAKCR+RSKS+WIHFPHVELLFILYAFQ
Sbjct: 673 LGPVAKCRDRSKSLWIHFPHVELLFILYAFQ 703
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.070e-9 Identity = 43/135 (31.85%), Postives = 66/135 (48.89%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREK-RDNLAKASAG-FEEGGVPQAGSVDGPPRQGPPPSYEQMMTQPDVDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL LF +I VH+LL SA EA+WL +++ R+ + +A G G A S R P + P D+ +G V++CRE S+S W+H+PH+EL+F+ +AF+
Sbjct: 196 FMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRALGGDLSTSGSSTAWSGT---RAIQSPQLMEHQALPSWDSTGRNDSTNVQEAARTNTRAGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFE 327
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 63.9 bits (154), Expect = 3.380e-9 Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREKR-DNLAKASAGFEEGGVPQAG--------------SVDGPPRQGPPPSYEQMMTQPDVDADXXXXXXXXXXXXXXXXXXXXXL-GPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
FLGN+ LF L I+V+H++LVSA EA+WL +E+ + L KA + G+P G + P S + M++ AD L +A CR RS S+W++FPH+ELLF+L+AF+
Sbjct: 132 FLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKA----QRRGIPIRGLGARRASRVAHSPDAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFE 276
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 4.850e-7 Identity = 42/148 (28.38%), Postives = 65/148 (43.92%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREKRDNLAKASA--GFEEGGVPQA-------------GSVDGPPRQGPPPSYEQMMTQPDVDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL LF L +I H+L+ S EA+W+ +++ + S G +P A GS G G S ++M Q D +G V+ CRE S+S W+H+PH+EL+F+ +AF+
Sbjct: 233 FMGNLALFSGLLVIIFTSHVLVASVVEAYWVAKQRARKVISRSLRRGLSLSEIPIALSGTWSQQPTMDDGSSAGSQSSGIMQSPQRMERQAVSPYDGGDSKSDEEEGGPRNTRPGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFE 380
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D7G5F3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI) HSP 1 Score: 57.4 bits (137), Expect = 5.940e-7 Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILV--VHLLLVSATEAWWLQREK-RDNLAKASAGFEE---------GGVPQAGSVDGPPRQGPPPS----YEQMMTQPDV---DADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL LF GFL+ + +H+L+ SA EA+WL +++ R+ + +A G G PQ ++D G S Q+M V D+ +G V++CRE S+S W+H+PH+EL+F+L+AF+
Sbjct: 64 FMGNLALFA--GFLLTIFSLHILVASAIEAYWLAKQRARNEVPRALRGDVSTSEFPTALLGTRPQQKNLDDGWSAGRQTSGTIQSPQLMEHQAVSSWDSTGGGDSTNEQKRGRTNTRAGSSIGQVSQCRELSQSAWLHYPHLELVFLLFAFE 213
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 1.320e-6 Identity = 45/146 (30.82%), Postives = 63/146 (43.15%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREK-RDNLAKASAGFEEGGVPQAGSVDGP------PRQGPPPSYEQMMTQPDV------DADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL L + + I +H+ VS EA WL +++ R+NL A G QA G P P + + QP + + L PVA CRE S S W+HFPHVEL+F+ +AF+
Sbjct: 1264 FVGNLALVIGILLAIFFMHVAAVSGVEALWLTKKRARENLDAARRRGAPIGELQARLRGGRIICRTNPDLADPSPFARQAPQPSGTPSTLHEEESDMSDEEEGGRGLVPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFE 1409
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 1.340e-6 Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREK-RDNLAKAS----------AGFEEGGV---PQAGSVDGPPRQGPPPSYEQMMTQPDVDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL L L + I +H+ +VS EA WL +++ R+NL A A F G + G D P PS + +Q + + L PVA CRE S S W+HFPHVEL+F+ +AF+
Sbjct: 1493 FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRIIRQTNPGLTDPSPFASRNPSLVRDGSQRTDEEEGGRELVPMCSENR--------LSPVAMCREHSTSAWLHFPHVELVFLFFAFE 1631
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 56.2 bits (134), Expect = 1.820e-6 Identity = 47/147 (31.97%), Postives = 66/147 (44.90%), Query Frame = 1
Query: 13 FLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREK-RDNLAKAS----------AGFEEGGV---PQAGSVDGPPRQGPPPSYEQMMTQPDVDADXXXXXXXXXXXXXXXXXXXXXLGPVAKCRERSKSIWIHFPHVELLFILYAFQ 411
F+GNL L L + I +H+ +VS EA WL +++ R+NL A A F G + G D P PS + +Q + + L PVA CRE S S W+HFPHVEL+F+ +AF+
Sbjct: 1452 FVGNLALVLGILLAIFFLHVAVVSGAEALWLTKKRARENLDGARRRNTPISELLARFRGGRMIRRTNPGLTDPSPFGSRNPSLVRDRSQRTDEEEGGRGLVPMCSENQ--------LSPVATCREHSTSAWLHFPHVELVFLFFAFE 1590 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16284.4272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16284.4272.1 >prot_E-fasciculatus_F_contig16284.4272.1 ID=prot_E-fasciculatus_F_contig16284.4272.1|Name=mRNA_E-fasciculatus_F_contig16284.4272.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp DEEGFLGNLVLFLCLGFLILVVHLLLVSATEAWWLQREKRDNLAKASAGFback to top mRNA from alignment at E-fasciculatus_F_contig16284:1309..2780+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16284.4272.1 ID=mRNA_E-fasciculatus_F_contig16284.4272.1|Name=mRNA_E-fasciculatus_F_contig16284.4272.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1472bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16284:1309..2780+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16284:1309..2780+ >mRNA_E-fasciculatus_F_contig16284.4272.1 ID=mRNA_E-fasciculatus_F_contig16284.4272.1|Name=mRNA_E-fasciculatus_F_contig16284.4272.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16284:1309..2780+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |