mRNA_E-fasciculatus_F_contig1628.4270.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1628.4270.1
Unique NamemRNA_E-fasciculatus_F_contig1628.4270.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: D7FWS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS2_ECTSI)

HSP 1 Score: 1360 bits (3521), Expect = 0.000e+0
Identity = 694/791 (87.74%), Postives = 729/791 (92.16%), Query Frame = 1 
Query:    1 MLSVRDVAAGRSVGENRTRSAPNATPSPANVGATSPPAPLGRLDINTPTLSAEELRAERRRKNNESARKSRFVQGIKNHIDSSAMDY-------------EAYKGIMKHDICQQVVHDECKAKENEHRAVVQAVRDVWSTVSRPSVVASAGGYSLRRTMLGIIGAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKLWPTLHHGETTGAACSCTCDLCTSAGGCKDFLPYSSTKEVSSMGKLSDKLMCDKIFLYTAAGNGTAISAHSSACVSGNCPRCKEKQERFFRCPRNKGGTDRHFGPASSSSSSIHPARPTSSGTVEWSMFDNVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKVCDHQLPQPGLTHPCP 2334
            MLSVRDVAAGR  GE+RT++   ATPSPANVGATSPP PLGRLDINTP   A+  +A +RRKN ES RK RFV+ IK +IDSSA  +             +AYKG+M H+IC+QVVHDECKAK+NEH AVVQAVRDVWS VS  SVVASAGGYSLRRTM+GIIG+PRV FEAAKSFLGGTLKEKTY KA+ERREEALKNNDFGK+ GKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHG+SYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVK+WPTLHHGETTGAACSCTCDLC+SAGGCK+FLPYSS KEVSSMGKLSDKLMCDKIFLYTA GNG AISAHSS CVSGNCPRCKE+Q+RFF CPRN+GG DR  GPAS+SSS+IHPA  TS GTVEWSMFD VDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVR IQGVYRKHRRQFHHQRSTFNET+ATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFK+RGRVWCYSFQVL+DDR+QDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEG ITKLAERTNVMNGSWVVRNP+HLCELLAK+FSFLLQEAS DE DRFYEDKSH+RGGQQLL+TKVCDHQLP  G   P P
Sbjct:    1 MLSVRDVAAGRLSGEHRTQATLFATPSPANVGATSPPTPLGRLDINTPPQPADPQQAAKRRKNTESTRKCRFVKAIKENIDSSARSHADTFGMSFEQAQKDAYKGVMTHEICRQVVHDECKAKKNEHHAVVQAVRDVWSIVSGSSVVASAGGYSLRRTMVGIIGSPRVSFEAAKSFLGGTLKEKTYKKARERREEALKNNDFGKMAGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGISYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKMWPTLHHGETTGAACSCTCDLCSSAGGCKEFLPYSSPKEVSSMGKLSDKLMCDKIFLYTATGNGKAISAHSSVCVSGNCPRCKERQDRFFGCPRNRGGIDRDLGPASTSSSTIHPAGRTSGGTVEWSMFDTVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVREIQGVYRKHRRQFHHQRSTFNETLATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKMRGRVWCYSFQVLTDDRTQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGAITKLAERTNVMNGSWVVRNPEHLCELLAKEFSFLLQEASPDEADRFYEDKSHSRGGQQLLVTKVCDHQLPPTGKDRPIP 791
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: D7G3S2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S2_ECTSI)

HSP 1 Score: 738 bits (1904), Expect = 2.460e-256
Identity = 365/648 (56.33%), Postives = 463/648 (71.45%), Query Frame = 1 
Query:  352 VQAVRDVWSTVSRPSVVASAGGYSLRRTMLGIIGAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHD-RAKGNHIRSDADNSLVCVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKLWPTLHHGETTGAACSCTCDLCTSAGGCKDFLPYSSTKEVSSMGKLSDKLMCDKIFLYTAAGNGTAISAHSSACVSGNCPRCKEKQERFFRCPRNKGGTDRHFGPASSSSSSIHPARPTSSGTVEWSMFDNVDEAGRAVGPSRRRGANA-GGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKV 2289
            + A+R+ W+ +++P VVA+  GY+ RRT+LG I   +V ++ A  FLGGTL  K++N+AKERR  AL++ D   L GKRK RSDNL++ YP A  RV +SI ERTQPSP  TKT HD R +G+HIRSDADNSLVCV PE C+TH + YM GTQ  LY+ CM+DLQ AF  G  E+ SIS+ SF+ ++PFYVVEQS RSCLCVHCYKAKL TV+L +LWPTLHHG+ +G+ C+C C  C S G C+ FLP+++ K V  MG LSD L+C+K+F+Y    NG  + AH S CVSG+CP C+ KQ  FF CPR++G TDR F  ++++  +   A     G V+WSMF +VD  GRA    R  G      D              PKK V  K GTVD+F +E ++I   Y  HRRQ+H+QRS F+ET+ TLEEG VVFV DFQEQLQL EQDEVQ+QHWQHESVTIFP PIYFK +GRVW YSFQVLSDDR+QD+ WVQ+VM ++L+ HVP L+RK+GA  M  AI FTDNCAKQFKCRFHFGW+A   VM+ D++G +T++ + +EHHYFGSCHGKS+SDSEG  TK   R N++N SWVV++P+HLC LL +   F+L E ++DE   F   ++ +RGG QLLMTKV
Sbjct:    1 MHAIRETWAKINQPHVVAAEAGYNARRTILGAIAGEKVKYKHANEFLGGTLSRKSFNEAKERRLTALEDGDVSALAGKRKMRSDNLQEKYPMACCRVEQSILERTQPSPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHRVHYMTGTQQHLYHQCMDDLQVAFSAGRAEIASISRSSFDKMVPFYVVEQSIRSCLCVHCYKAKLITVALYQLWPTLHHGDNSGSGCTCNCGFC-SDGACRTFLPFATEKSVHGMGDLSDLLLCEKVFIYRGQ-NGKDVKAHRSVCVSGHCPTCQRKQAAFFGCPRHQGTTDRRFPSSAATLGACPSAMEGQPGRVKWSMFTSVDAEGRATDARRLAGPQPPDDDDGDWEPRVASDTSRPKKAVATKTGTVDDFTKEFKDIFRRYIPHRRQYHNQRSAFHETLRTLEEGTVVFVFDFQEQLQLIEQDEVQAQHWQHESVTIFPCPIYFKWKGRVWSYSFQVLSDDRTQDHAWVQHVMFKILTEHVPALMRKLGAPAMVLAIFFTDNCAKQFKCRFHFGWLASRAVMVCDTNGESTNVPVHIEHHYFGSCHGKSSSDSEGANTKGVTRHNIINQSWVVQSPRHLCTLLGESMDFMLLEPTEDEAMTFETARTSSRGGDQLLMTKV 646
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: D7FXZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ3_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 1.240e-205
Identity = 326/661 (49.32%), Postives = 426/661 (64.45%), Query Frame = 1 
Query:  322 KAKENEHRAVVQAVRDVWSTVSRPSVVASAGGYSLRRTMLGIIGAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLVCVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKLWPTLHHGETTGAACSCTCDLCTSAGGCKDFLPYSSTKEVSSMGKLSDKLMCDKIFLYTAAGNGTAISAHSSACVSGNCPRCKEKQERFFRCPRNKGGTDRHFGPASSSSSSIHPARPTSSGTVEWSMFDNVDEAGRAVGP--SRRRGAN--AGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGG-QQLLMTKV 2289
            K KE  + A+   +R +W  +S    VAS+ G+  RR +LG +  P   ++    F+GG+L  + +N+A+ RR+     +    L   RK RSD LE   P A+A + E I   TQPSPC  KT+HD   GNH RS+ADNSLVCV P  C+T  + Y+MGT+LQLY + M+DL  AF    VEV SIS+ SF+ IIPFYVVEQS RSC+CVHCYKAKL T  L  LWPTLH G T G+ C C C+LC   GGC ++LPY S+K V SM   SD LMC K  LY +  +GT   AH + CVSG+C  CK+KQERFF CP+NKG  DR   PA+  +    P      G V W  F  VD+ G+A      RRR  N  AGG+               ++ V  K GTVDEF  E+++ +  + KHRR +  QR+ F E   T+EEG+V+ +VDFQE+LQ+ EQDEVQSQHW  E+ TIFP PI+FK+ GRVW YSFQ+LSDD +QDN WVQ+VM++LL+  +P LLRK+GA PMT+  I+TDNCAKQFKCRFHFGWVA + +M  D DG  T +R+ +EHHYFG+CHGK+ SD+EG +TK   R  ++N  W V + + LCE L K  +F L+ A+ +E + F++D++   GG +QLL+TK 
Sbjct:  133 KHKERGNEAIRDNIRALWKRLSSSETVASSEGWQFRRVLLGALCGPNTTYKEVHEFVGGSLSHRAFNEAQIRRDATDTTSILHDLISDRKLRSDRLEVSCPKALAWIVERIIFHTQPSPCLVKTEHDYDTGNHRRSEADNSLVCVYPARCKTESVRYLMGTKLQLYQTVMKDLDQAFAAEKVEVPSISRPSFDKIIPFYVVEQSLRSCICVHCYKAKLVTKGLCDLWPTLHQGSTPGSKCDCECELCKD-GGCAEYLPYGSSKAVHSMADFSDMLMCPKEQLYCSE-DGTLEDAHKAVCVSGHCLLCKQKQERFFDCPKNKGNADRQLNPAAGPAQVGAPPP----GEVRWKNFTTVDDNGQATSAPLQRRRAPNSTAGGEDDEDFDPLGGSKRRTRRAVAEKTGTVDEFMAELKDHRASFGKHRRSYKTQRAAFTEKKLTIEEGEVLCIVDFQERLQVGEQDEVQSQHWDREATTIFPCPIFFKVDGRVWAYSFQILSDDMAQDNAWVQFVMSKLLNEDIPALLRKIGAKPMTRCTIWTDNCAKQFKCRFHFGWVADAQIMGLDKDGEPTGIRVHMEHHYFGACHGKNVSDAEGGMTKEYVRRMILNMMWRVASSRDLCEKLEKALNFFLRFANGEETEAFWKDRNGREGGTEQLLVTKT 787
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 489 bits (1259), Expect = 6.380e-151
Identity = 291/649 (44.84%), Postives = 386/649 (59.48%), Query Frame = 1 
Query:  352 VQAVRDVWSTVSRPSVVASAGGYSLRRTMLGIIGAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHD-RAKGNHIRSDADNSLVCVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFEDIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKLWPTLHHGETTGAACSCTCDLCTSAGGCKDFLPYSSTKEVSSMGKLSDKLMCDKIFLYTAAGNGTAISAHSSACVSGNCPRCKEKQERFFRCPRNKGGTDRHFGPASSSSSSIHPARPTSSGTV-EWSMFDNVDEAGRAVGPSRRRGANAGGDXXXXXXXXXXXXXXPKKGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKVC 2292
            V+A+R++WS +++P VVA+  GY+ RRT+LG I +  V +  A  F+GG+L   T+N+AK RRE AL   D  KL+GKRK+RSDNL++ YP A +RV +SI ERTQPSP  TKT HD R +G+HIRSDADNSLVCV  E               ++ NS        FE G  EVGSIS++SF+ ++PFYVVEQS RSCLCVH Y+AKL TV+L +LW TLHHG+T+ + C+CTC  C S G C+ FLP+++ K V  MG LSD L+C+K            I+ H+SA           K+            +DR F PASS++  +     TS G   + +  D+ D A R    S R                      PKK  +  + + +++  +     G             ST      T      VFV DFQEQL+L EQDEVQSQHWQHE VTIFP PI+ K +GR               DN WVQ+VM ++++ HVP L+RK+GA  M +AI FTDNCAKQFKCRFHFGW+A   VMIRD++G +T++ + VEHHYFGSCHG S SDSEG  TK   R N++N +WVV+ P+HL  LL +   F+L+E +++E+  F   ++ +RGG QLL+TK C
Sbjct:  105 VEAIREIWSNINQPHVVATLPGYNARRTILGAIASIDVKYSTACEFVGGSLSRATFNEAKARRETALAAGDMSKLSGKRKERSDNLQEKYPMACSRVEQSIAERTQPSPNLTKTNHDYRRRGDHIRSDADNSLVCVHREK--------------EVRNS------PGFEAGAAEVGSISRRSFDKMVPFYVVEQSLRSCLCVHYYRAKLITVALCQLWSTLHHGDTSDSGCTCTCGFC-SDGACRTFLPFATAKSVHGMGDLSDLLLCEK-----------GIARHASA----------GKRHSSVVLVITAVSSDRRF-PASSAA--LGAIASTSEGQAGKPTDDDDGDWAPRVASDSSR----------------------PKKLTISPKNS-EKYSGDTLLTGG-------------ST------TPNGAHSVFVFDFQEQLKLMEQDEVQSQHWQHERVTIFPCPIHCKWKGR---------------DNAWVQHVMFKIMTEHVPALMRKLGAPAMVRAIFFTDNCAKQFKCRFHFGWLASHEVMIRDNNGGSTNVPVHVEHHYFGSCHGNSGSDSEGANTKSTTRQNIINQTWVVQGPRHLSTLLGESMDFILEEPTEEEEMIFEASRTSSRGGDQLLVTKTC 651
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6H5L1G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G9_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.420e-57
Identity = 113/231 (48.92%), Postives = 139/231 (60.17%), Query Frame = 1 
Query: 1597 HQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKV 2289
            H       T  TLEEG VV+V DFQEQ QL EQDEVQSQHWQH+SVTIF  PIY K + R+W YS+QVLSDDR+QDN W                     A P    + FTDNCAKQFKCRFHFGW+A   VMIRD+ G +T++ + VEHHYFGSCHGKS                       V+ P+HLC LL +   F+L+E +++E+  F   ++ +R G QLLMTK+
Sbjct:    6 HPTERIQRTSLTLEEGTVVYVFDFQEQRQLMEQDEVQSQHWQHDSVTIFRCPIYLKWKARMWAYSYQVLSDDRTQDNAW---------------------ALPPWCELFFTDNCAKQFKCRFHFGWLASYEVMIRDNHGESTNVPVHVEHHYFGSCHGKS-----------------------VQGPRHLCTLLGESMDFILEEPTEEEEIIFEASRTSSRRGDQLLMTKI 192
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6H5JXK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK3_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 2.330e-57
Identity = 114/244 (46.72%), Postives = 146/244 (59.84%), Query Frame = 1 
Query: 1654 FVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAA---PMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGK-----------------------------SNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKV 2289
            F +  QE+LQL EQDEVQ QHWQHE+VTIFP PIYFK +GRVW YSFQVLSD R                       ++VGAA    M +AI FTDNCAKQFKCRFHFGW+A   V+IRD++G +T++ + VEHH+FGSCHGK                             S SD +G  TK     N++N +WVV+ P+HLC LL +   F+L+E +++E+  F    + +RGG QLLMTK+
Sbjct:   29 FRLRLQEKLQLMEQDEVQLQHWQHENVTIFPCPIYFKWKGRVWAYSFQVLSDYRKSG--------------------QRVGAACAPTMMRAIFFTDNCAKQFKCRFHFGWLASHEVIIRDNNGGSTNVPVHVEHHHFGSCHGKRDDXFAITTAGLPTYQCMWSITTLGAATGSGSDIKGANTKGTTTQNIINQTWVVQGPRHLCTLLGEAMDFILEEPTEEEEMIFEASSTSSRGGDQLLMTKL 252
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6H5KFD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD4_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 2.410e-44
Identity = 89/179 (49.72%), Postives = 118/179 (65.92%), Query Frame = 1 
Query: 1753 IYFKLRGRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKSHTRGGQQLLMTKV 2289
            IYFK +GRVW  SFQVLSDDR+QDN W Q VM +L++ HVP L+RK+GA  M +AI FTDNCAK+FKCR HFGW+A   V+IRD +G +T++ +  EHHYFGSCHGKS                       V++P+HLC LL +   F+L+E +++E   F   ++ + GG QLL+T V
Sbjct:  120 IYFKWKGRVWANSFQVLSDDRTQDNAWAQDVMFKLMTEHVPVLMRKLGAPAMVRAIFFTDNCAKRFKCRLHFGWLASHEVIIRDINGESTNVPVHAEHHYFGSCHGKS-----------------------VQSPRHLCTLLGESVDFILEEPTKEEMT-FEASRTSSSGGDQLLVTTV 274
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6H5JLV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV8_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 6.540e-40
Identity = 83/167 (49.70%), Postives = 111/167 (66.47%), Query Frame = 1 
Query:  352 VQAVRDVWSTVSRPSVVASAGGYSLRRTMLGIIGAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRSDNLEDLYPFAMARVRESIEERTQPSPCETKTKHD-RAKGNHIRSDADNSLVCVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAA 849
            V+A+ ++W+ V++P VVA+  GY  RR +LG I +  V +  A  F+GG+L    +N+AK  RE AL + D  KL+G  K+RSDNL+   P A  R  +S  E TQP P  TKT HD R +G+HIRSDADNSLVCV PE C+TH + Y+ GT+  L+  CM+DLQAA
Sbjct:   49 VEAITEIWANVNQPHVVATLPGYKARRAILGAIASNHVKYSTACEFVGGSLSRAAFNEAKAPRETALADGDMSKLSGTSKERSDNLQKKSPMACGRE-QSFAEHTQPFPNLTKTNHDYRQRGDHIRSDADNSLVCVHPEKCETHPVYYITGTRDHLFRQCMDDLQAA 214
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: UPI000B45A240 (uncharacterized protein LOC110453517 n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45A240)

HSP 1 Score: 79.3 bits (194), Expect = 1.860e-11
Identity = 59/193 (30.57%), Postives = 88/193 (45.60%), Query Frame = 1 
Query: 1600 QRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGR----VWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRNPQHL 2166
            Q+  F+  + T+    VV  +DF E    S Q+EVQS HW H SVTI P   Y++  G     V   +   +SDD   D   V      L + H    L+ V    + + I  TD C+ Q+K +  F  ++ +            D    VE H++GS HGK  SD  G + K + + +VM  + V+ N + L
Sbjct:  374 QQVQFSGLVKTVPPNWVVLNMDFSENYSCSNQNEVQSAHWGHNSVTIHPTVAYYQCPGEECVDVVQEAMVFVSDDLQHDAHAVAK-FTSLANEH----LQNVRGLTIEREIQLTDGCSAQYKSKTPFTDISFAN----------HDHGFPVERHFYGSRHGKGPSDGAGAVVKSSAKRSVMGMNSVINNAEDL 551
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Match: A0A6J8CGW0_MYTCO (Uncharacterized protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CGW0_MYTCO)

HSP 1 Score: 79.0 bits (193), Expect = 3.110e-11
Identity = 63/221 (28.51%), Postives = 98/221 (44.34%), Query Frame = 1 
Query: 1498 KKGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQVVFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLR--GRVWCYSFQVLSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQFKCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVITKLAERTNVMNGSWVVRN 2154
            KK + +K+ +V+ F EE++     +  H      Q   F      L     VF  DF E      QDE QS HW H++VT+F    Y + +    V   S   +S+D+  D  +VQ+ ++ L + ++    ++V      + I F+D  A QFK +  F           D+  + +D    VE H+FGS HGK   D E  + K      V N   +V+N
Sbjct:  481 KKVLSLKKESVNNFLEELKKELQPFSAHLNTAWWQHDQFRHVTQNLPSDWTVFCSDFAENYTCIYQDEAQSAHWSHDTVTLFSIVAYIRCKFCKLVVTQSMIYVSEDKKHDFHYVQHCIS-LANEYI----QRVYEIKSKRQIHFSDGAASQFKSKTPFA----------DALHSKSDFGFPVEKHFFGSRHGKGPCDGEFGVIKRIVTNAVKNRKAMVKN 686
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1628.4270.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWS2_ECTSI0.000e+087.74Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G3S2_ECTSI2.460e-25656.33Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FXZ3_ECTSI1.240e-20549.32Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K4U5_9PHAE6.380e-15144.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L1G9_9PHAE1.420e-5748.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXK3_9PHAE2.330e-5746.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFD4_9PHAE2.410e-4449.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLV8_9PHAE6.540e-4049.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000B45A2401.860e-1130.57uncharacterized protein LOC110453517 n=1 Tax=Mizuh... [more]
A0A6J8CGW0_MYTCO3.110e-1128.51Uncharacterized protein n=2 Tax=Mytilus coruscus T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1628contigE-fasciculatus_F_contig1628:2692..8765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score81.6
Seed ortholog evalue1.7e-12
Seed eggNOG ortholog6500.XP_005094568.1
EggNOG OGs2CNQC@1,2QXFF@2759,39Y03@33154,3BMKX@33208,3D3RP@33213
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size2358
Cds size2358
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1628.4270.1prot_E-fasciculatus_F_contig1628.4270.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1628 2692..8765 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928098.680078-CDS-E-fasciculatus_F_contig1628:2691..35461622928098.680078-CDS-E-fasciculatus_F_contig1628:2691..3546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 2692..3546 -
1695995819.249165-CDS-E-fasciculatus_F_contig1628:2691..35461695995819.249165-CDS-E-fasciculatus_F_contig1628:2691..3546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 2692..3546 -
1622928098.7162006-CDS-E-fasciculatus_F_contig1628:3925..45791622928098.7162006-CDS-E-fasciculatus_F_contig1628:3925..4579Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 3926..4579 -
1695995819.2647772-CDS-E-fasciculatus_F_contig1628:3925..45791695995819.2647772-CDS-E-fasciculatus_F_contig1628:3925..4579Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 3926..4579 -
1622928098.734983-CDS-E-fasciculatus_F_contig1628:4922..51961622928098.734983-CDS-E-fasciculatus_F_contig1628:4922..5196Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 4923..5196 -
1695995819.2753565-CDS-E-fasciculatus_F_contig1628:4922..51961695995819.2753565-CDS-E-fasciculatus_F_contig1628:4922..5196Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 4923..5196 -
1622928098.7483785-CDS-E-fasciculatus_F_contig1628:5536..59291622928098.7483785-CDS-E-fasciculatus_F_contig1628:5536..5929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 5537..5929 -
1695995819.2870572-CDS-E-fasciculatus_F_contig1628:5536..59291695995819.2870572-CDS-E-fasciculatus_F_contig1628:5536..5929Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 5537..5929 -
1622928098.7648435-CDS-E-fasciculatus_F_contig1628:8583..87651622928098.7648435-CDS-E-fasciculatus_F_contig1628:8583..8765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 8584..8765 -
1695995819.2956815-CDS-E-fasciculatus_F_contig1628:8583..87651695995819.2956815-CDS-E-fasciculatus_F_contig1628:8583..8765Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1628 8584..8765 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1628.4270.1

>prot_E-fasciculatus_F_contig1628.4270.1 ID=prot_E-fasciculatus_F_contig1628.4270.1|Name=mRNA_E-fasciculatus_F_contig1628.4270.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=786bp
MLSVRDVAAGRSVGENRTRSAPNATPSPANVGATSPPAPLGRLDINTPTL
SAEELRAERRRKNNESARKSRFVQGIKNHIDSSAMDYEAYKGIMKHDICQ
QVVHDECKAKENEHRAVVQAVRDVWSTVSRPSVVASAGGYSLRRTMLGII
GAPRVGFEAAKSFLGGTLKEKTYNKAKERREEALKNNDFGKLTGKRKQRS
DNLEDLYPFAMARVRESIEERTQPSPCETKTKHDRAKGNHIRSDADNSLV
CVRPELCQTHGLSYMMGTQLQLYNSCMEDLQAAFEQGHVEVGSISKKSFE
DIIPFYVVEQSPRSCLCVHCYKAKLATVSLVKLWPTLHHGETTGAACSCT
CDLCTSAGGCKDFLPYSSTKEVSSMGKLSDKLMCDKIFLYTAAGNGTAIS
AHSSACVSGNCPRCKEKQERFFRCPRNKGGTDRHFGPASSSSSSIHPARP
TSSGTVEWSMFDNVDEAGRAVGPSRRRGANAGGDGESDDDSGGAGRPRPK
KGVVVKRGTVDEFFEEVRNIQGVYRKHRRQFHHQRSTFNETIATLEEGQV
VFVVDFQEQLQLSEQDEVQSQHWQHESVTIFPAPIYFKLRGRVWCYSFQV
LSDDRSQDNVWVQYVMNQLLSVHVPGLLRKVGAAPMTKAIIFTDNCAKQF
KCRFHFGWVAQSGVMIRDSDGNATDMRLVVEHHYFGSCHGKSNSDSEGVI
TKLAERTNVMNGSWVVRNPQHLCELLAKDFSFLLQEASQDEKDRFYEDKS
HTRGGQQLLMTKVCDHQLPQPGLTHPCPMIGRLGC*
back to top

mRNA from alignment at E-fasciculatus_F_contig1628:2692..8765-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1628.4270.1 ID=mRNA_E-fasciculatus_F_contig1628.4270.1|Name=mRNA_E-fasciculatus_F_contig1628.4270.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6074bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1628:2692..8765- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTTGTCAGTCCGCGACGTCGCCGCCGGGCGGTCTGTGGGCGAAAACCG
GACACGATCCGCCCCGAACGCTACGCCATCGCCAGCCAACGTTGGTGCCA
CGTCTCCGCCAGCACCGCTGGGTCGTCTAGACATCAACACCCCAACCCTA
TCCGCCGAGGAACTAAGGGCGGAAAGGAGAAGGTGAGAACAGCAGTAGAC
AGCTTGGGGTTCGTTCTCTAACGGCGTTCCCGCAGGTACACACGCGTAAT
GAGAACGTGCGGGAGAGACGTGCTCCTTCGAGCACTCGCTCGTAATTTTG
AACAGAATGATCGCGCCCCAGGCCGGCCTTTAATCCCAATCAAGCGAGCA
ACCAAGCGGAGTACGCCTGCCCGTCTGTGTGCCACATTCCAGCGCCGCAC
GCGGGCTCCTACCCAGGCTCAGTCATGTCAGTGCGAGCGCACACATGCAT
GTGCATCAACATGTGCCGATGATATGACGATTCATTCTCGTCTCTCGTTG
CAAAATATTGAGACCAACCGTCATTTATTTGTAGGTGCGTGCGTGCTGAA
CGAAGGTAACGCCAGGCCAGCCATGCGCTGCGTGCAAGCAGTCTCATTCC
TAGATGGCCGTAATGCGAAAGGTTGGGCAACTCACAGCCACTGATGATAG
TCAATACCAAAGGGGCGTGGTGGCTGCGTGCGGACATACGACGCAGTCCC
ACGAAGGGCGATTTTACAGCAAACGGTGACTACAGCAAGCAGCAGCAGCA
GTCCTACACCGTGATGCATACATAACGCCCAGTTTTTTGCCTGTGCTCCA
CGGCCAACTTCACACGTTTGGTTTTGTTTGGGAAATATCAACTACTTGTA
AATAGTCGGTCGTCTACAACACCCACACTTTCTATTCATCTATTGGACCC
CGATATATGCACAAACACGCAGAGTCAAACCAGCCGTCCGGGCGTTTTGG
TTGAAATCTATTTCGAATGCAGTCTATCGCCTATGTGGGAGGATTGATTT
CGCTGACGAGACCACGAATGCCAGAATTTCCAACGCCAAAGCACGTGTGT
CGCCCCGTAACAACTCACTGCTGGTCATTTCCCGTCATTTCGTGTCAACG
GCTAATTACCGAACACCTGGCGTGAACCATCATCGGCATTAGATCCGGCC
CAATTCCTTCACAGGTAGGGGGAACGACCGAAACGCCGTCGTCGTGAACA
TATGGTAAAGGGTTGTCTAAACATTAAACTGCTGCAATACAACGGCGGTT
TATCTTGCTTTTGGTTCAATTCTTGTTGTTCATGGTCGCATGGAACTTAA
CGGAACTACATAGACTATTGTACAAACTTCAAATTCTAACGGTTTTTCTG
GTGACCACAAGAAAGATGTACAGCAGTGTGTAACCCTCTATAGCGCGCGT
TATCTGGTGCGATTTTCCGGTAGAGTGCGGGTGAAATTGGCTGGTTGGGT
TACTGTGGAGGTTGCTTCCCAAAATGTGCCCAGTCAAAAAGCAAACGGCC
GGTTGTGTGCAGCGAGACAGTCCAAGAAACAGGTGTAGGGCAAGACTGAA
CATGAGGCTTGGACGCCCGCTGATGCTTAGCTTCGTGTGTGTGCTGATTG
AGAAGTATATTTTTACTGCTGCTCCCGTGTGGTACACATGGTCTGTCGCT
CTTCGTGCTTTGAACTGCATCGCTCTTCGCTCTAAGAACTGCTGGGTGGT
CACCACGTCACCTCGCGGCAGCGATGTTCCGCCACATTTGGGTGTTGCTG
GGATTTGGGTGCGGATAAATTACGTTAGAATGACGCAAGCCATTTTTGAC
AAAAAATAACAATTACTGCTGTTGGTCTAATTTTTAACGTTAATACAGGG
CCTTATCCCGGTCTCGCCGAGCGCATTCGTCGCTTTGCGTGCCGAAAATG
GGCTTTTAAAGCCGGTCCGGTGGGTGTAAAGTGCCATCCTACGTAACCCG
CGGGGACCCCAAAGAGGCGGCCAATTACTCATGGCGAAGACCGGAACCCG
ACGTACGCAGTCAACGGAGGTAGCAAGCTCTTGTTTCGAAGAGCCTGCAG
TCATCGTAACCTGGGGGTAACCGAATACACATACAAACTTCTCTGCGCCC
TTCGCACGGCACCGTCGGAATCCGAAGTCCGCATTACACCAAGCTTGCGA
ATGGTGACAGAAATTAATGGTCCGGGAGGTTGGAGTTTGTGTCCGCTAGG
TGTATCAACTCACTCAATGGAGTTGGTACCAGCTCCACCTTTCTTTAGGG
GCGAGTCGCTCGAGTTATCGACTCAATGCAGTTGGCTTGGGACCTACTCC
CCTCTGGACTTGTATCATCATCGATCGACTCAATGGAGTTGGCACGGGCT
CCACCTTTATGGGCGAGTCGCTCGAGTTATCGACTCAATGCAGTTGGCTT
GGGTCCCACTCCCCTCTTGACTTGTCTCGTCGATCGACTCAATCGAGTTG
GAACGGGCTCCGCCTTTATAGGCGAGTCGCTAGAGTTATTGACTCAATTC
AGTTGGCTTCGGGCCCACTCCCCTCTGGACTTGTATCATCGATCGACTCA
ATCGAGTTGGCACCATGTCACCCCCCCCTTTCGATATGAGCTGACAGTTG
GACAAAATACATACACAACCAATCAACGTTGACTGCACTAGATCAAATCC
CGACTGGTCACTCTAGATTTTTTTTCGGCAACGTATGACGAGGTGTCACG
CCCAGAAGATCGCTGCTTAAATCCAAGTGCTAAACCGGGTGGCGACGACA
ACGAGTCGAAAGTACATCCGACTTCTTGATGAATGCATGTTGGAAATACG
AGTCCCGCCTTCATGTTCGTTTTGCAATTCGAACAGGAAGAACAACGAAT
CCGCCAGGAAGAGCCGGTTTGTACAAGGCATCAAGAACCACATCGACTCG
AGTGCAATGGACTACGAGGCCTACAAGGGCATCATGAAGCACGACATATG
CCAACAAGTTGTTCACGACGAGTGCAAGGCAAAAGAGAACGAACACCGCG
CCGTCGTGCAGGCCGTGCGCGACGTGTGGTCAACCGTGAGCCGGCCGAGC
GTCGTTGCAAGTGCGGGAGGGTATTCGCTACGGAGAACAATGTTGGGCAT
CATCGGCGCTCCTCGTGTTGGCTTCGAGGCCGCCAAGTCCTTCCTAGGAG
GAACCCTCAAAGAGAAGACGTACAACAAGGCCAAGGAACGACGAGAGGAG
GCGCTGAAGAACAACGATTTCGGAAAATTGTAAGTCCACCTCAAAAACAA
ATTATCTACCCACCTATGTGATTGTAGGCCATTTGGTGCAAGCTGCTACT
ATTGCTGTGATCGTAGGCCATTTGGTGCAAGCTGCTACTATTGCAAAATC
CCATTCAACATGTGCATATGTTGGCCACGCAGCTTGCCGCGATTAAACGT
GCAGGTCCTTACATATATAGCCACTACGAGATTTTTACGACTAGTCTAAT
GGAGAGGTAGGCACAGGAGTAGTACAGAAGCAAAGTCCTCTCATTTCATA
TATATATATGTTGGCACCTGTCGCACTTCCTCAATACGTTTGCTATCTTC
TTCCCGATGTCGCGCGCAGGACGGGAAAACGAAAACAAAGATCGGACAAC
CTGGAGGACCTTTACCCGTTCGCGATGGCCAGGGTTAGGGAAAGCATCGA
GGAGCGCACACAGCCGTCACCGTGCGAAACGAAGACGAAGCACGACCGCG
CGAAGGGGAACCATATCCGGTCGGACGCGGATAACTCCCTCGTTTGTGTG
CGCCCCGAGCTGTGCCAAACACACGGATTATCCTACATGATGGGGACACA
ACTACAGCTCTACAACTCTTGCATGGAAGATCTCCAGGCAGCGGTAAGAG
AGAAGAAGACGAAGCTTCGTGGTTCGTTGTTATCGACTGAACGATCCCGG
TGTGCCTTGACAGCAATCAGAGTCAATTTATCTTACCTTGGACGCTGTTT
TCGCTTCTTCTTGGGTGCAGCCTTCTCCTGGGAACGGGTCTTACTTATCC
GTTGACCCGCTGTAGGTGTCATGGCCATTAGGACAAGGAGAATGTAAAGA
AACATCAATGATGCATCATGGGCGTCATGCTTTGCAAATGTATATATATA
TAGAATATCTCGCCATATCTCGATTGCCAAAGACAGTTTACAAGAGGTCC
CATCATCCACCCGCGTGTGCCGTACTTGCCGAACAGTTTGAACAGGGCCA
TGTCGAAGTGGGGTCGATATCCAAGAAGTCTTTCGAGGACATAATACCCT
TCTACGTAGTGGAACAGTCACCTCGCTCCTGCCTTTGTGTGCATTGTTAC
AAGGCCAAGCTAGCTACGGTTTCCCTTGTCAAGCTGTGGCCGACGCTCCA
CCACGGCGAAACAACGGGAGCAGCCTGCTCGTGCACTTGCGACCTGTGCA
CCTCGGCAGGGGGCTGTAAGGATTTCCTACCGTATTCCTCGACCAAGGAG
GTCTCCAGCATGGGCAAGCTAAGCGACAAACTGATGTGCGACAAAATCTT
CCTTTACACAGCTGCCGGCAACGGGACGGCCATCAGCGCACATTCATCGG
CCTGCGTTTCGGGGAATTGCCCGCGGTGTAAGGAAAAGCAGGAACGCTTC
TTCCGTTGCCCTCGGAATAAAGGGGGTACCGACAGGCACTTCGGGCCCGC
TTCGTCCTCTTCGTCCAGCATCCATCCTGCAAGACCAACGTCGAGTGGGA
CCGTCGAGTGGAGTATGTTCGACAACGTAGATGAAGCGGGGCGTGCGGTG
GGGCCCAGCCGTAGGAGAGGGGCAAATGCGGGCGGCGACGGAGAGAGCGA
CGACGACTCAGGGGGCGCGGGCAGGCCAAGACCGAAGAAGGTGAAAACAG
TGTGTTTCGCTGACATTATTTAGGGTAACCTTCGATTCTGCCTGAAACGC
TGGGTGACACGACGCACCGATCCGTTAGTGCAGATCGGGCGTTTGTTCCA
AGGCGCTTTGAATCTTCCCATTTATCGGCGCAGAGGTATACACCACGTTC
GAGTCGCTAGCGTTAGTGAGTAGAGCAATCGTTGAATGTGTTGCCAACCA
ATATTCCCATGCGAAAACGGCCCAACGAAAATGATGTTTTGCTTTTCGGG
ACGTTGTTTGCGTATCTTCACTTCAATAACTCACCAACAACTTGGTTGAT
TTCATTGTGGCCCGACTCGTACACATACCGTGCGTGTCTCGTGACGACCT
GTTCCCCCCCATCGAGCAGGGGGTTGTTGTCAAGAGAGGCACGGTCGACG
AGTTCTTCGAAGAGGTTCGGAATATTCAGGGCGTCTACAGAAAGCATCGG
AGACAGTTCCACCACCAGAGGAGTACATTCAACGAGACTATAGCAACGTT
GGAAGAGGGGCAGGTCGTGTTTGTCGTAGACTTTCAGGAACAGCTACAAC
TGAGCGAGCAGGACGAAGTTCAGTCCCAACACTGGCAGCACGAGAGTGTG
ACCATTTTCCCCGCCCCTATCTACTTCAAGTTGAGAGGGCGAGTTTGGTG
CTACTCTTTCCAGGTCCTCAGCGATGACAGGTCCCAGGACAACGTATGGG
TGCAGTACGTCATGAATCAGTTGCTAAGTGTCCATGTCCCTGGCCTGTTG
CGGAAAGTAGGGGCCGCCCCGATGACCAAAGCCATCATCTTCACGGACAA
CTGTGCCAAGCAGTTCAAGTGTAGATTTCACTTTGGCTGGGTTGCCCAAA
GCGGGGTGATGATCCGCGACTCCGACGGAAATGCCACCGACATGCGTCTT
GTTGTTGAGCACCACTACTTCGGCTCGTGTCATGGGAAGAGCAATTCAGA
CTCAGAGGGGGTTATCACGAAGTTGGCAGAGAGAACGAACGTCATGAACG
GGTCGTGGGTGGTCCGAAACCCGCAACATCTCTGCGAGCTGCTGGCGAAG
GATTTCTCCTTCTTGCTGCAGGAGGCTTCTCAAGACGAGAAGGATCGGTT
CTACGAAGACAAGAGCCACACCCGAGGAGGGCAGCAGCTTCTGATGACAA
AGGTGTGCGACCATCAACTGCCCCAACCGGGATTGACACACCCATGCCCG
ATGATAGGTCGACTTGGTTGCTAA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1628:2692..8765-

>mRNA_E-fasciculatus_F_contig1628.4270.1 ID=mRNA_E-fasciculatus_F_contig1628.4270.1|Name=mRNA_E-fasciculatus_F_contig1628.4270.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4716bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1628:2692..8765- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTTGTCAGTCCGCGACGTCGCCGCCGGGCGGTCTGTGGGCGAAAACCG
GACACGATCCGCCCCGAACGCTACGCCATCGCCAGCCAACGTTGGTGCCA
CGTCTCCGCCAGCACCGCTGGGTCGTCTAGACATCAACACCCCAACCCTA
TCCGCCGAGGAACTAAGGGCGGAAAGGAGAAGATGTTGTCAGTCCGCGAC
GTCGCCGCCGGGCGGTCTGTGGGCGAAAACCGGACACGATCCGCCCCGAA
CGCTACGCCATCGCCAGCCAACGTTGGTGCCACGTCTCCGCCAGCACCGC
TGGGTCGTCTAGACATCAACACCCCAACCCTATCCGCCGAGGAACTAAGG
GCGGAAAGGAGAAGGAAGAACAACGAATCCGCCAGGAAGAGCCGGTTTGT
ACAAGGCATCAAGAACCACATCGACTCGAGTGCAATGGACTACGAGGCCT
ACAAGGGCATCATGAAGCACGACATATGCCAACAAGTTGTTCACGACGAG
TGCAAGGCAAAAGAGAACGAACACCGCGCCGTCGTGCAGGCCGTGCGCGA
CGTGTGGTCAACCGTGAGCCGGCCGAGCGTCGTTGCAAGTGCGGGAGGGT
ATTCGCTACGGAGAACAATGTTGGGCATCATCGGCGCTCCTCGTGTTGGC
TTCGAGGCCGCCAAGTCCTTCCTAGGAGGAACCCTCAAAGAGAAGACGTA
CAACAAGGCCAAGGAACGACGAGAGGAGGCGCTGAAGAACAACGATTTCG
GAAAATTGAAGAACAACGAATCCGCCAGGAAGAGCCGGTTTGTACAAGGC
ATCAAGAACCACATCGACTCGAGTGCAATGGACTACGAGGCCTACAAGGG
CATCATGAAGCACGACATATGCCAACAAGTTGTTCACGACGAGTGCAAGG
CAAAAGAGAACGAACACCGCGCCGTCGTGCAGGCCGTGCGCGACGTGTGG
TCAACCGTGAGCCGGCCGAGCGTCGTTGCAAGTGCGGGAGGGTATTCGCT
ACGGAGAACAATGTTGGGCATCATCGGCGCTCCTCGTGTTGGCTTCGAGG
CCGCCAAGTCCTTCCTAGGAGGAACCCTCAAAGAGAAGACGTACAACAAG
GCCAAGGAACGACGAGAGGAGGCGCTGAAGAACAACGATTTCGGAAAATT
GACGGGAAAACGAAAACAAAGATCGGACAACCTGGAGGACCTTTACCCGT
TCGCGATGGCCAGGGTTAGGGAAAGCATCGAGGAGCGCACACAGCCGTCA
CCGTGCGAAACGAAGACGAAGCACGACCGCGCGAAGGGGAACCATATCCG
GTCGGACGCGGATAACTCCCTCGTTTGTGTGCGCCCCGAGCTGTGCCAAA
CACACGGATTATCCTACATGATGGGGACACAACTACAGCTCTACAACTCT
TGCATGGAAGATCTCCAGGCAGCGGACGGGAAAACGAAAACAAAGATCGG
ACAACCTGGAGGACCTTTACCCGTTCGCGATGGCCAGGGTTAGGGAAAGC
ATCGAGGAGCGCACACAGCCGTCACCGTGCGAAACGAAGACGAAGCACGA
CCGCGCGAAGGGGAACCATATCCGGTCGGACGCGGATAACTCCCTCGTTT
GTGTGCGCCCCGAGCTGTGCCAAACACACGGATTATCCTACATGATGGGG
ACACAACTACAGCTCTACAACTCTTGCATGGAAGATCTCCAGGCAGCGTT
TGAACAGGGCCATGTCGAAGTGGGGTCGATATCCAAGAAGTCTTTCGAGG
ACATAATACCCTTCTACGTAGTGGAACAGTCACCTCGCTCCTGCCTTTGT
GTGCATTGTTACAAGGCCAAGCTAGCTACGGTTTCCCTTGTCAAGCTGTG
GCCGACGCTCCACCACGGCGAAACAACGGGAGCAGCCTGCTCGTGCACTT
GCGACCTGTGCACCTCGGCAGGGGGCTGTAAGGATTTCCTACCGTATTCC
TCGACCAAGGAGGTCTCCAGCATGGGCAAGCTAAGCGACAAACTGATGTG
CGACAAAATCTTCCTTTACACAGCTGCCGGCAACGGGACGGCCATCAGCG
CACATTCATCGGCCTGCGTTTCGGGGAATTGCCCGCGGTGTAAGGAAAAG
CAGGAACGCTTCTTCCGTTGCCCTCGGAATAAAGGGGGTACCGACAGGCA
CTTCGGGCCCGCTTCGTCCTCTTCGTCCAGCATCCATCCTGCAAGACCAA
CGTCGAGTGGGACCGTCGAGTGGAGTATGTTCGACAACGTAGATGAAGCG
GGGCGTGCGGTGGGGCCCAGCCGTAGGAGAGGGGCAAATGCGGGCGGCGA
CGGAGAGAGCGACGACGACTCAGGGGGCGCGGGCAGGCCAAGACCGAAGA
AGTTTGAACAGGGCCATGTCGAAGTGGGGTCGATATCCAAGAAGTCTTTC
GAGGACATAATACCCTTCTACGTAGTGGAACAGTCACCTCGCTCCTGCCT
TTGTGTGCATTGTTACAAGGCCAAGCTAGCTACGGTTTCCCTTGTCAAGC
TGTGGCCGACGCTCCACCACGGCGAAACAACGGGAGCAGCCTGCTCGTGC
ACTTGCGACCTGTGCACCTCGGCAGGGGGCTGTAAGGATTTCCTACCGTA
TTCCTCGACCAAGGAGGTCTCCAGCATGGGCAAGCTAAGCGACAAACTGA
TGTGCGACAAAATCTTCCTTTACACAGCTGCCGGCAACGGGACGGCCATC
AGCGCACATTCATCGGCCTGCGTTTCGGGGAATTGCCCGCGGTGTAAGGA
AAAGCAGGAACGCTTCTTCCGTTGCCCTCGGAATAAAGGGGGTACCGACA
GGCACTTCGGGCCCGCTTCGTCCTCTTCGTCCAGCATCCATCCTGCAAGA
CCAACGTCGAGTGGGACCGTCGAGTGGAGTATGTTCGACAACGTAGATGA
AGCGGGGCGTGCGGTGGGGCCCAGCCGTAGGAGAGGGGCAAATGCGGGCG
GCGACGGAGAGAGCGACGACGACTCAGGGGGCGCGGGCAGGCCAAGACCG
AAGAAGGGGGTTGTTGTCAAGAGAGGCACGGTCGACGAGTTCTTCGAAGA
GGTTCGGAATATTCAGGGCGTCTACAGAAAGCATCGGAGACAGTTCCACC
ACCAGAGGAGTACATTCAACGAGACTATAGCAACGTTGGAAGAGGGGCAG
GTCGTGTTTGTCGTAGACTTTCAGGAACAGCTACAACTGAGCGAGCAGGA
CGAAGTTCAGTCCCAACACTGGCAGCACGAGAGTGTGACCATTTTCCCCG
CCCCTATCTACTTCAAGTTGAGAGGGCGAGTTTGGTGCTACTCTTTCCAG
GTCCTCAGCGATGACAGGTCCCAGGACAACGTATGGGTGCAGTACGTCAT
GAATCAGTTGCTAAGTGTCCATGTCCCTGGCCTGTTGCGGAAAGTAGGGG
CCGCCCCGATGACCAAAGCCATCATCTTCACGGACAACTGTGCCAAGCAG
TTCAAGTGTAGATTTCACTTTGGCTGGGTTGCCCAAAGCGGGGTGATGAT
CCGCGACTCCGACGGAAATGCCACCGACATGCGTCTTGTTGTTGAGCACC
ACTACTTCGGCTCGTGTCATGGGAAGAGCAATTCAGACTCAGAGGGGGTT
ATCACGAAGTTGGCAGAGAGAACGAACGTCATGAACGGGTCGTGGGTGGT
CCGAAACCCGCAACATCTCTGCGAGCTGCTGGCGAAGGATTTCTCCTTCT
TGCTGCAGGAGGCTTCTCAAGACGAGAAGGATCGGTTCTACGAAGACAAG
AGCCACACCCGAGGAGGGCAGCAGCTTCTGATGACAAAGGTGTGCGACCA
TCAACTGCCCCAACCGGGATTGACACACCCATGCCCGATGATAGGTCGAC
TTGGTTGCTAAGGGGTTGTTGTCAAGAGAGGCACGGTCGACGAGTTCTTC
GAAGAGGTTCGGAATATTCAGGGCGTCTACAGAAAGCATCGGAGACAGTT
CCACCACCAGAGGAGTACATTCAACGAGACTATAGCAACGTTGGAAGAGG
GGCAGGTCGTGTTTGTCGTAGACTTTCAGGAACAGCTACAACTGAGCGAG
CAGGACGAAGTTCAGTCCCAACACTGGCAGCACGAGAGTGTGACCATTTT
CCCCGCCCCTATCTACTTCAAGTTGAGAGGGCGAGTTTGGTGCTACTCTT
TCCAGGTCCTCAGCGATGACAGGTCCCAGGACAACGTATGGGTGCAGTAC
GTCATGAATCAGTTGCTAAGTGTCCATGTCCCTGGCCTGTTGCGGAAAGT
AGGGGCCGCCCCGATGACCAAAGCCATCATCTTCACGGACAACTGTGCCA
AGCAGTTCAAGTGTAGATTTCACTTTGGCTGGGTTGCCCAAAGCGGGGTG
ATGATCCGCGACTCCGACGGAAATGCCACCGACATGCGTCTTGTTGTTGA
GCACCACTACTTCGGCTCGTGTCATGGGAAGAGCAATTCAGACTCAGAGG
GGGTTATCACGAAGTTGGCAGAGAGAACGAACGTCATGAACGGGTCGTGG
GTGGTCCGAAACCCGCAACATCTCTGCGAGCTGCTGGCGAAGGATTTCTC
CTTCTTGCTGCAGGAGGCTTCTCAAGACGAGAAGGATCGGTTCTACGAAG
ACAAGAGCCACACCCGAGGAGGGCAGCAGCTTCTGATGACAAAGGTGTGC
GACCATCAACTGCCCCAACCGGGATTGACACACCCATGCCCGATGATAGG
TCGACTTGGTTGCTAA
back to top