mRNA_E-fasciculatus_F_contig16273.4268.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig16273.4268.1
Unique NamemRNA_E-fasciculatus_F_contig16273.4268.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A6H5JI82_9PHAE (Protein phosphatase methylesterase-1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI82_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 2.620e-152
Identity = 269/390 (68.97%), Postives = 289/390 (74.10%), Query Frame = 1 
Query:    1 MGPPQGDGHEGPGSSDGRVQLPPXXXASWPAAGSAKQLGGSAAAVAAHVPSWSGFDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSADTDAPRENDTNNAEDGDDCGGEGGADTPLMSLDSLAEDVTSLLVEIFSSGVLLQPQLPQRQKKEQGEHQ----------QEALQAASPSPQPSPALHAKDSERVTKSPASSCSSSS----DPPSGGPAAVRAQSP-RGSEDHEGGVATAAXXXXNTNTITNNTGVNTCNATGPRSASPGTPSNDVAAEESHSSGGSGSSCTSSPSIRLLLVGHSLGGSIAVRVAGAAEELSRRCGGSAEIAGVVAVDVVEGTALSALDDMPEV 1125
            MGPPQGDGHEGPGSSD RVQLPP   ASWPAAGS KQLGG+A+A+A HVPSWSGFDEDFEVHLPGREHTTFFVRVAGR+LAA NGVAVVLHGGGFTGMSWAPAAGVM+RHCCVV+PDLRGHGLTSSA TDAPRE+D N  +DGD+CGGEGGADTPLMSLDSLAEDVT LLVEIFS G+LLQPQLPQRQ                  Q  L+ A P                       CSS S    DPPSG P  + A  P +GSEDH  GV T       TNT   +       AT P  ASP  PSND AAEE+HSS GSGSS T SP+IRLLLVGHSLGGS+AVRVAGAA+EL  RCGG+AEIAGVVAVDVVEGTALSALDDMPE+
Sbjct:    1 MGPPQGDGHEGPGSSDRRVQLPPPPPASWPAAGSGKQLGGAASAIATHVPSWSGFDEDFEVHLPGREHTTFFVRVAGRKLAAINGVAVVLHGGGFTGMSWAPAAGVMKRHCCVVAPDLRGHGLTSSAGTDAPRESDANYCDDGDECGGEGGADTPLMSLDSLAEDVTCLLVEIFSCGMLLQPQLPQRQXXXXXXXXXXXXXXXXXXQAPLRTACPX---------XXXXXXXXXXXXXCSSRSXXXGDPPSGDPTTIGAHPPPQGSEDHGRGVVT-------TNTTPGS-------ATQPHRASPEIPSNDGAAEEAHSSSGSGSSSTGSPTIRLLLVGHSLGGSVAVRVAGAAQELRERCGGAAEIAGVVAVDVVEGTALSALDDMPEI 367
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: D7FSV3_ECTSI (Protein phosphatase methylesterase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV3_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 5.030e-89
Identity = 181/375 (48.27%), Postives = 191/375 (50.93%), Query Frame = 1 
Query:    1 MGPPQGDGHEGPGSSDGRVQLPPXXXASWPAAGSAKQLGGSAAAVAAHVPSWSGFDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSADTDAPRENDTNNAEDGDDCGGEGGADTPLMSLDSLAEDVTSLLVEIFSSGVLLQPQLPQRQKKEQGEHQQEALQAASPSPQPSPALHAKDSERVTKSPASSCSSSSDPPSGGPAAVRAQSPRGSEDHEGGVATAAXXXXNTNTITNNTGVNTCNATGPRSASPGTPSNDVAAEESHSSGGSGSSCTSSPSIRLLLVGHSLGGSIAVRVAGAAEELSRRCGGSAEIAGVVAVDVVEGTALSALDDMPEV 1125
            MGPPQGDGHEGPGSSD RVQLPP   ASWPAAGS KQLGG+A+A+AAHVPSWSGFDEDFEVHLPGREHTTFFVRV+GRELAA NGVAVVLHGGGFTGMSWAPAAGVM+RHCCVV+PDLRGHGLTSSAD                                                                                                                                                                           EE+HS   SGSS TSSP+IRLLLVGHSLGGSIAVRVAGAA EL RRCGG+AEI GVVAVDVVEGTALSALDDMPE+
Sbjct:    1 MGPPQGDGHEGPGSSDRRVQLPPPPPASWPAAGSGKQLGGAASAIAAHVPSWSGFDEDFEVHLPGREHTTFFVRVSGRELAATNGVAVVLHGGGFTGMSWAPAAGVMKRHCCVVAPDLRGHGLTSSAD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------EEAHSGSASGSSSTSSPTIRLLLVGHSLGGSIAVRVAGAAGELRRRCGGAAEITGVVAVDVVEGTALSALDDMPEI 204
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A1Y1IFT6_KLENI (Protein phosphatase methylesterase 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IFT6_KLENI)

HSP 1 Score: 61.6 bits (148), Expect = 7.710e-7
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSAD 384
            WS  FDE+ +V + G     F V  AG+E      V + LHGGG+TG+S+A AA  M+  C V++PDLRGHG T ++D
Sbjct:   73 WSNYFDEERDVEIAGTTDM-FHVYSAGKE----GPVLLCLHGGGYTGVSFATAAAHMKATCRVIAPDLRGHGRTRTSD 145
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A835YP78_9STRA (Protein phosphatase methylesterase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP78_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.200e-6
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:  211 FFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSAD 384
            F V VAG    +  G+  +LHG GFTGMSWAP    +++ CC V+PDLR HG T++AD
Sbjct:   10 FDVHVAGAANMS-GGLVFLLHGAGFTGMSWAPLVDHLKQLCCCVAPDLRAHGGTTTAD 66
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A2P6U3R7_CHLSO (Protein phosphatase methylesterase-1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3R7_CHLSO)

HSP 1 Score: 59.7 bits (143), Expect = 4.220e-6
Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSS 378
            WS  FD + +VH P R   TF V  AG    +   V + LHGGG+TG+SWA  A  ++  C V++PDLR HG T +
Sbjct:   57 WSNYFDAEQDVHCPERG-ATFHVCTAG----SSGPVVLCLHGGGYTGLSWALIARRLKDKCRVIAPDLRAHGRTQA 127
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A7S0UTK2_9CHLO (Protein phosphatase methylesterase-1 (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UTK2_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 4.450e-5
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 1 
Query:  145 VPSWSGF-DEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSS 378
            +  W  + D+   + +PGR    F V  AG+E  A     ++LHGGG+TG++W+  A  ++    V +PDLRGHGLT++
Sbjct:   55 IKEWDAYWDKKLSIEVPGRG--VFNVYGAGKEGPAL----ILLHGGGYTGLTWSLVAQTLKDKYRVYAPDLRGHGLTTT 127
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A453C1T4_AEGTS (Protein phosphatase methylesterase-1 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453C1T4_AEGTS)

HSP 1 Score: 52.8 bits (125), Expect = 7.520e-5
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSAD 384
            WS  FDE+  V +P  E   F V +AG E      V   LHGGG++G+S+A AA  ++    VV+ DLRGHG +S++D
Sbjct:    3 WSAYFDEERPVAIPNTEDV-FNVYMAGSE----GPVVFCLHGGGYSGLSFALAANQIKGKARVVAMDLRGHGKSSTSD 75
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A7I4E2B4_PHYPA (Protein phosphatase methylesterase 1 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E2B4_PHYPA)

HSP 1 Score: 55.1 bits (131), Expect = 8.820e-5
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSAD 384
            W G FDED  V +P  +   F V +AG E      V   LHGGG+TG+S+A  AG M+    VV+ D+RGHG + ++D
Sbjct:   31 WQGHFDEDKMVAIPDSDDI-FHVYLAGTE----GPVVFCLHGGGYTGLSFALIAGKMKEKVRVVAMDMRGHGQSKTSD 103
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A9U2U7_PHYPA (Protein phosphatase methylesterase-1 (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U2U7_PHYPA)

HSP 1 Score: 55.1 bits (131), Expect = 8.860e-5
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSSAD 384
            W G FDED  V +P  +   F V +AG E      V   LHGGG+TG+S+A  AG M+    VV+ D+RGHG + ++D
Sbjct:   45 WQGHFDEDKMVAIPDSDDI-FHVYLAGTE----GPVVFCLHGGGYTGLSFALIAGKMKEKVRVVAMDMRGHGQSKTSD 117
[Close]
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Match: A0A3S3QVI1_9MAGN (Protein phosphatase methylesterase 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QVI1_9MAGN)

HSP 1 Score: 55.1 bits (131), Expect = 9.070e-5
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  154 WSG-FDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSWAPAAGVMRRHCCVVSPDLRGHGLTSS 378
            WSG FD++ +V +PG  +  F V +AG    ++  V   LHGGG++G+S+A AA  ++    VV+ DLRGHG +S+
Sbjct:   42 WSGYFDQEDDVSIPG-SNDVFHVYMAG----SQGPVVFCLHGGGYSGLSFALAASEIKEKARVVAMDLRGHGKSST 112
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16273.4268.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JI82_9PHAE2.620e-15268.97Protein phosphatase methylesterase-1 n=1 Tax=Ectoc... [more]
D7FSV3_ECTSI5.030e-8948.27Protein phosphatase methylesterase-1 n=1 Tax=Ectoc... [more]
A0A1Y1IFT6_KLENI7.710e-746.15Protein phosphatase methylesterase 1 n=1 Tax=Klebs... [more]
A0A835YP78_9STRA1.200e-651.72Protein phosphatase methylesterase 1 n=1 Tax=Tribo... [more]
A0A2P6U3R7_CHLSO4.220e-644.74Protein phosphatase methylesterase-1 n=1 Tax=Chlor... [more]
A0A7S0UTK2_9CHLO4.450e-537.97Protein phosphatase methylesterase-1 (Fragment) n=... [more]
A0A453C1T4_AEGTS7.520e-543.59Protein phosphatase methylesterase-1 n=1 Tax=Aegil... [more]
A0A7I4E2B4_PHYPA8.820e-543.59Protein phosphatase methylesterase 1 n=1 Tax=Physc... [more]
A9U2U7_PHYPA8.860e-543.59Protein phosphatase methylesterase-1 (Fragment) n=... [more]
A0A3S3QVI1_9MAGN9.070e-542.11Protein phosphatase methylesterase 1 n=1 Tax=Cinna... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16273contigE-fasciculatus_F_contig16273:608..2377 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score283.5
Seed ortholog evalue1.4e-73
Seed eggNOG ortholog2880.D7FSV3
Preferred namePPME1
KEGG koko:K13617
GOsGO:0000086,GO:0000278,GO:0000313,GO:0000314,GO:0002028,GO:0003674,GO:0003735,GO:0003824,GO:0004857,GO:0004864,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006464,GO:0006482,GO:0006518,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0008214,GO:0009058,GO:0009059,GO:0009636,GO:0009892,GO:0009987,GO:0010467,GO:0010563,GO:0010605,GO:0010921,GO:0010923,GO:0010959,GO:0015935,GO:0016787,GO:0016788,GO:0019208,GO:0019212,GO:0019220,GO:0019222,GO:0019538,GO:0019888,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0022402,GO:0030091,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032515,GO:0032543,GO:0032879,GO:0032991,GO:0034641,GO:0034645,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0036211,GO:0042221,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0043412,GO:0043603,GO:0043604,GO:0043666,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0045936,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0051716,GO:0051721,GO:0051722,GO:0051723,GO:0052689,GO:0060255,GO:0065007,GO:0065009,GO:0070013,GO:0070887,GO:0070988,GO:0071704,GO:0080090,GO:0097237,GO:0098754,GO:0098772,GO:0098798,GO:0140053,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1903047,GO:1990577,GO:1990748,GO:1990904
EggNOG free text desc.protein methylesterase activity
EggNOG OGsCOG0596@1,KOG2564@2759
EC3.1.1.89
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein phosphatase methylesterase, eukaryotic
Ec32 orthologEc-19_001900.1
Exons2
Model size1125
Cds size1125
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928098.5811083-CDS-E-fasciculatus_F_contig16273:607..8831622928098.5811083-CDS-E-fasciculatus_F_contig16273:607..883Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16273 608..883 +
1695995819.211835-CDS-E-fasciculatus_F_contig16273:607..8831695995819.211835-CDS-E-fasciculatus_F_contig16273:607..883Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16273 608..883 +
1622928098.5932326-CDS-E-fasciculatus_F_contig16273:1528..23771622928098.5932326-CDS-E-fasciculatus_F_contig16273:1528..2377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16273 1529..2377 +
1695995819.2254155-CDS-E-fasciculatus_F_contig16273:1528..23771695995819.2254155-CDS-E-fasciculatus_F_contig16273:1528..2377Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig16273 1529..2377 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16273.4268.1prot_E-fasciculatus_F_contig16273.4268.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig16273 608..2377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig16273.4268.1

>prot_E-fasciculatus_F_contig16273.4268.1 ID=prot_E-fasciculatus_F_contig16273.4268.1|Name=mRNA_E-fasciculatus_F_contig16273.4268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=375bp
MGPPQGDGHEGPGSSDGRVQLPPPPPASWPAAGSAKQLGGSAAAVAAHVP
SWSGFDEDFEVHLPGREHTTFFVRVAGRELAAKNGVAVVLHGGGFTGMSW
APAAGVMRRHCCVVSPDLRGHGLTSSADTDAPRENDTNNAEDGDDCGGEG
GADTPLMSLDSLAEDVTSLLVEIFSSGVLLQPQLPQRQKKEQGEHQQEAL
QAASPSPQPSPALHAKDSERVTKSPASSCSSSSDPPSGGPAAVRAQSPRG
SEDHEGGVATAAATTTNTNTITNNTGVNTCNATGPRSASPGTPSNDVAAE
ESHSSGGSGSSCTSSPSIRLLLVGHSLGGSIAVRVAGAAEELSRRCGGSA
EIAGVVAVDVVEGTALSALDDMPEV
back to top

mRNA from alignment at E-fasciculatus_F_contig16273:608..2377+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig16273.4268.1 ID=mRNA_E-fasciculatus_F_contig16273.4268.1|Name=mRNA_E-fasciculatus_F_contig16273.4268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1770bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16273:608..2377+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGACCTCCGCAAGGCGATGGCCACGAGGGGCCTGGTAGCAGCGATGG
TCGAGTTCAGCTCCCGCCACCGCCCCCAGCTTCCTGGCCTGCTGCCGGCA
GCGCCAAGCAACTGGGAGGATCAGCAGCAGCTGTTGCAGCTCACGTTCCC
TCCTGGTCGGGCTTTGACGAGGACTTCGAGGTGCATCTGCCTGGCCGAGA
ACATACGACCTTCTTCGTGCGTGTGGCAGGGCGCGAGCTCGCCGCGAAAA
ATGGCGTCGCGGTGGTGCTCCATGGGGTGAGATGAGAACACTCAATTAAT
AAACACCGCCGAGATGGGATTTGCCGCGCGCGCCTCTCACGTGTTGTATG
CATATGCATAGCAACAGCACCTCCGCACCTCGACCAATTCAAACCTGCGT
TAGTCTAAGCTGGACCCACTACTTTGTAGTTCTAGTTGATGCATCGCCTC
CGGGTGGTCCAGTTGATAACCTCGTACCCTTCTAATGCCTCTGCAGATGG
TGGGAACGAATCTCTGAAGCGAAACTCGAAAATCGCAACCTCTATGTAGG
GGGAAAGGGCAGGGAGAGGGAAGAAACAAGGGGCCACAGCTGTGTTGGGT
TCGAGTTCGAAGCACCCCCGGAGCCCTGACTCGAAATGGACGTGTCTTGT
TTCCGGCAGCCGACTGGGTTACGTCTGGCGGAACACGTAACGTTGGCTTG
CAATCAATTTTTGATTCCCATGTTAATGTGAAGACAACAACAACAATGTT
GACGACTACTACTGTTCGCCGGTAACCTCCAAGGTGCGGAACGAATGTTG
ATGTTTTGTACGCTGCTCCCCTGGGAGAAGGGGAGGCCACCTGAGCACTC
CCGTACGCGCGATCCCCAACTTTCTGGCTCTCTTTGCTGCGTACTGCTTG
CGGTGGCTTTGACCAAACCAGGGTGGCTTTACGGGCATGTCCTGGGCGCC
GGCGGCGGGCGTGATGAGGCGCCACTGCTGCGTTGTCTCGCCTGATCTAC
GAGGTCACGGCCTCACGTCTTCCGCCGACACCGACGCCCCAAGGGAAAAC
GACACCAACAATGCCGAGGATGGGGATGACTGCGGCGGCGAGGGTGGCGC
GGATACCCCCCTCATGTCCCTTGATAGCCTAGCGGAAGACGTGACGAGTC
TGCTCGTGGAGATATTCAGCAGCGGGGTGCTGTTGCAGCCGCAACTCCCG
CAGCGACAGAAGAAGGAGCAAGGGGAGCACCAACAGGAGGCGTTGCAGGC
GGCCTCCCCGTCACCCCAGCCTTCGCCGGCACTTCATGCCAAGGATAGTG
AGCGTGTTACGAAAAGCCCCGCGTCGTCCTGTAGCAGCAGCAGCGACCCA
CCCAGTGGTGGCCCCGCTGCCGTAAGAGCGCAGTCCCCCCGAGGTTCAGA
AGACCACGAAGGAGGCGTCGCCACCGCCGCCGCCACCACCACCAACACCA
ACACCATCACCAACAACACCGGCGTCAACACTTGTAATGCGACGGGACCA
CGGAGCGCCAGCCCCGGAACCCCTTCGAATGACGTTGCGGCAGAAGAATC
GCACAGCAGCGGCGGGAGCGGCAGCTCGTGTACCAGCAGCCCGAGTATCA
GGCTACTCCTGGTGGGGCATTCCCTGGGAGGCTCTATCGCGGTCCGGGTG
GCCGGCGCGGCGGAGGAGCTCAGTCGGCGCTGCGGGGGCTCAGCGGAGAT
CGCGGGCGTCGTCGCCGTCGACGTGGTGGAGGGGACGGCGCTGTCCGCCT
TGGACGACATGCCCGAGGTA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16273:608..2377+

>mRNA_E-fasciculatus_F_contig16273.4268.1 ID=mRNA_E-fasciculatus_F_contig16273.4268.1|Name=mRNA_E-fasciculatus_F_contig16273.4268.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2250bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16273:608..2377+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGGACCTCCGCAAGGCGATGGCCACGAGGGGCCTGGTAGCAGCGATGG
TCGAGTTCAGCTCCCGCCACCGCCCCCAGCTTCCTGGCCTGCTGCCGGCA
GCGCCAAGCAACTGGGAGGATCAGCAGCAGCTGTTGCAGCTCACGTTCCC
TCCTGGTCGGGCTTTGACGAGGACTTCGAGGTGCATCTGCCTGGCCGAGA
ACATACGACCTTCTTCGTGCGTGTGGCAGGGCGCGAGCTCGCCGCGAAAA
ATGGCGTCGCGGTGGTGCTCCATGGGATGGGACCTCCGCAAGGCGATGGC
CACGAGGGGCCTGGTAGCAGCGATGGTCGAGTTCAGCTCCCGCCACCGCC
CCCAGCTTCCTGGCCTGCTGCCGGCAGCGCCAAGCAACTGGGAGGATCAG
CAGCAGCTGTTGCAGCTCACGTTCCCTCCTGGTCGGGCTTTGACGAGGAC
TTCGAGGTGCATCTGCCTGGCCGAGAACATACGACCTTCTTCGTGCGTGT
GGCAGGGCGCGAGCTCGCCGCGAAAAATGGCGTCGCGGTGGTGCTCCATG
GGGGTGGCTTTACGGGCATGTCCTGGGCGCCGGCGGCGGGCGTGATGAGG
CGCCACTGCTGCGTTGTCTCGCCTGATCTACGAGGTCACGGCCTCACGTC
TTCCGCCGACACCGACGCCCCAAGGGAAAACGACACCAACAATGCCGAGG
ATGGGGATGACTGCGGCGGCGAGGGTGGCGCGGATACCCCCCTCATGTCC
CTTGATAGCCTAGCGGAAGACGTGACGAGTCTGCTCGTGGAGATATTCAG
CAGCGGGGTGCTGTTGCAGCCGCAACTCCCGCAGCGACAGAAGAAGGAGC
AAGGGGAGCACCAACAGGAGGCGTTGCAGGCGGCCTCCCCGTCACCCCAG
CCTTCGCCGGCACTTCATGCCAAGGATAGTGAGCGTGTTACGAAAAGCCC
CGCGTCGTCCTGTAGCAGCAGCAGCGACCCACCCAGTGGTGGCCCCGCTG
CCGTAAGAGCGCAGTCCCCCCGAGGTTCAGAAGACCACGAAGGAGGCGTC
GCCACCGCCGCCGCCACCACCACCAACACCAACACCATCACCAACAACAC
CGGCGTCAACACTTGTAATGCGACGGGACCACGGAGCGCCAGCCCCGGAA
CCCCTTCGAATGACGTTGCGGCAGAAGAATCGCACAGCAGCGGCGGGAGC
GGCAGCTCGTGTACCAGCAGCCCGAGTATCAGGCTACTCCTGGTGGGGCA
TTCCCTGGGAGGCTCTATCGCGGTCCGGGTGGCCGGCGCGGCGGAGGAGC
TCAGTCGGCGCTGCGGGGGCTCAGCGGAGATCGCGGGCGTCGTCGCCGTC
GACGTGGTGGAGGGGACGGCGCTGTCCGCCTTGGACGACATGCCCGAGGT
AGGTGGCTTTACGGGCATGTCCTGGGCGCCGGCGGCGGGCGTGATGAGGC
GCCACTGCTGCGTTGTCTCGCCTGATCTACGAGGTCACGGCCTCACGTCT
TCCGCCGACACCGACGCCCCAAGGGAAAACGACACCAACAATGCCGAGGA
TGGGGATGACTGCGGCGGCGAGGGTGGCGCGGATACCCCCCTCATGTCCC
TTGATAGCCTAGCGGAAGACGTGACGAGTCTGCTCGTGGAGATATTCAGC
AGCGGGGTGCTGTTGCAGCCGCAACTCCCGCAGCGACAGAAGAAGGAGCA
AGGGGAGCACCAACAGGAGGCGTTGCAGGCGGCCTCCCCGTCACCCCAGC
CTTCGCCGGCACTTCATGCCAAGGATAGTGAGCGTGTTACGAAAAGCCCC
GCGTCGTCCTGTAGCAGCAGCAGCGACCCACCCAGTGGTGGCCCCGCTGC
CGTAAGAGCGCAGTCCCCCCGAGGTTCAGAAGACCACGAAGGAGGCGTCG
CCACCGCCGCCGCCACCACCACCAACACCAACACCATCACCAACAACACC
GGCGTCAACACTTGTAATGCGACGGGACCACGGAGCGCCAGCCCCGGAAC
CCCTTCGAATGACGTTGCGGCAGAAGAATCGCACAGCAGCGGCGGGAGCG
GCAGCTCGTGTACCAGCAGCCCGAGTATCAGGCTACTCCTGGTGGGGCAT
TCCCTGGGAGGCTCTATCGCGGTCCGGGTGGCCGGCGCGGCGGAGGAGCT
CAGTCGGCGCTGCGGGGGCTCAGCGGAGATCGCGGGCGTCGTCGCCGTCG
ACGTGGTGGAGGGGACGGCGCTGTCCGCCTTGGACGACATGCCCGAGGTA
back to top