mRNA_E-fasciculatus_F_contig16256.4256.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: D7G000_ECTSI (Coiled-coil flagellar protein, move backward only 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G000_ECTSI) HSP 1 Score: 335 bits (860), Expect = 1.110e-109 Identity = 185/188 (98.40%), Postives = 186/188 (98.94%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQ EALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNN LKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLE+NNASMHYR
Sbjct: 288 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQGEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNRLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLEANNASMHYR 475
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A7S3XQY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQY0_HETAK) HSP 1 Score: 239 bits (609), Expect = 9.240e-73 Identity = 131/188 (69.68%), Postives = 154/188 (81.91%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
+RQ+VD+ +ARFL QE E KR L L+E+V+ LE E+ QWG EE++Q KL+ +L QR+IK EA+RAQ AE+DT +QVK+K+L I DL+KRCND NN LKEFSALYDVVKNERNKYVNLIQAS+QALAEMKEKIKIL NEVDILRNES AKDKAL+KE+ AH+ASQAQRDGLRLE N A YR
Sbjct: 47 LRQEVDVAIARFLRQEGLEREKRDGLDLLVEQVEALEGEIAQWGAEERKQAKLLHVLSAQREIKAREAMRAQAAERDTREQVKVKELAILDLTKRCNDVNNRLKEFSALYDVVKNERNKYVNLIQASNQALAEMKEKIKILQNEVDILRNESAAKDKALQKEKSAHQASQAQRDGLRLELNKAQTEYR 234
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A7S1U464_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U464_9STRA) HSP 1 Score: 211 bits (536), Expect = 3.970e-60 Identity = 115/185 (62.16%), Postives = 150/185 (81.08%), Query Frame = 1
Query: 10 DVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
+VDI +ARFL QE E +KRS+L AL+EEVDGLE + +W EE++Q K++++L QR+++ EALRA+ +EKDT +QV++K+LVI DL+K+CN+ NN LKEFSALYDVVKNERNKYVNLIQ+S+QA AEM+EKI+IL NEVDIL ES AKD+AL+KE A +A+Q QRD LRL++N A YR
Sbjct: 386 EVDILIARFLQQESIEQNKRSELDALVEEVDGLEETLAKWHAEERKQNKILSVLSAQRELRSREALRAKASEKDTREQVRIKELVILDLTKKCNEVNNRLKEFSALYDVVKNERNKYVNLIQSSNQAQAEMREKIRILQNEVDILLAESGAKDRALQKEHAARQAAQTQRDALRLDTNKAQAEYR 570
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A1V9Z3F5_9STRA (MBO2, coiled coil flagellar protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3F5_9STRA) HSP 1 Score: 204 bits (519), Expect = 8.810e-58 Identity = 113/188 (60.11%), Postives = 144/188 (76.60%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++QDVD+ +AR + E +K ++L AL + V EAE+ QW EE +Q+K++ALL QR++K A A EK T Q++KMK+LVI D +K+CN+TNN LKEFSALYD+VKNERNKYVNLIQAS QALAEMKEKIKILHNEV++LRNESLAKDKAL KER+AH+ +Q RD LRL++N + YR
Sbjct: 387 LKQDVDVLIARLFKLDTVEKAKVAELQALAQRVTDYEAELTQWVAEEVKQQKIIALLSAQREMKARAASTAVDNEKATQQELKMKELVILDFAKKCNETNNRLKEFSALYDIVKNERNKYVNLIQASSQALAEMKEKIKILHNEVEVLRNESLAKDKALTKERLAHQTAQCSRDSLRLDTNKSHELYR 574
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A8K1C4E7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E7_PYTOL) HSP 1 Score: 203 bits (517), Expect = 2.130e-57 Identity = 113/188 (60.11%), Postives = 143/188 (76.06%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++Q +D+ +ARFL E +E + +L + + V LE EV QW +EE + +KLVA+L QR++K EA A +AEK T Q++KMK+LVI DL+K+ N+TNN LKEFSALYDVVKNERNKYVNLIQA+ QALAEMKEKIKIL NEV++LRNES+AKDKAL KER+AH +Q RD LRLE+N YR
Sbjct: 431 VKQQIDVLIARFLKHEDSEKEQNEELETMAQNVTSLEEEVAQWIQEEAKHKKLVAMLTAQRELKAREAASALEAEKQTQQELKMKELVIFDLAKKWNETNNHLKEFSALYDVVKNERNKYVNLIQAASQALAEMKEKIKILQNEVEVLRNESIAKDKALGKERLAHTTAQCSRDSLRLETNKCHDQYR 618
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A5D6Y4G9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4G9_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.590e-57 Identity = 117/188 (62.23%), Postives = 144/188 (76.60%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++Q VD+ +ARFL QE E + +L AL V LEAEV QW E +Q KLVA+L QR++K EA A ++E+ T Q++KMK+LVI DL+K+ N+TNN LKEFSALYDVVKNERNKYVNLIQAS QALAEMKEKIKILHNEV++LRNESLAKDKAL KE++AH +Q RD LRL++N + YR
Sbjct: 406 VKQQVDLLIARFLRQEDGEKRQSGELDALASTVAALEAEVAQWLLEAGKQTKLVAMLTAQREMKAREAAAALESERQTQQELKMKELVIFDLAKKWNETNNHLKEFSALYDVVKNERNKYVNLIQASSQALAEMKEKIKILHNEVEVLRNESLAKDKALGKEKLAHGTAQCSRDSLRLDTNKSHEQYR 593
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A329SVV3_9STRA (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SVV3_9STRA) HSP 1 Score: 202 bits (513), Expect = 7.770e-57 Identity = 115/188 (61.17%), Postives = 147/188 (78.19%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++Q VD+ +ARFL QE EN++ ++L AL +V GLEAEV QW EE +Q+KLV +L QR++K EA A +E+ T Q++K K+LVI DL+K+ N+T N L+EFSALYDVVKNERNKYVNLIQAS QALAEMKEKIKIL+NEV++LRNESLAKDKAL KE++AH +Q RD LRL++N + YR
Sbjct: 437 VKQQVDLLIARFLKQEDGENAQSAELEALSAQVAGLEAEVAQWLVEEGKQKKLVTMLTAQRELKAREAASALNSERQTQQELKTKELVIFDLAKKWNETTNHLREFSALYDVVKNERNKYVNLIQASTQALAEMKEKIKILNNEVEVLRNESLAKDKALVKEKLAHSTAQCSRDSLRLDTNKSHDAYR 624
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A3R7J844_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J844_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.550e-56 Identity = 114/188 (60.64%), Postives = 144/188 (76.60%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
+++ VD+ +ARFL QE E ++ +DL L +V LEAEV QW EE +Q+KLV +L QR++K EA A AE+ T Q++K K+LVI DL+K+ N+T N L+EFSALYDVVKNERNKYVNLIQAS QALAEMKEKIKILHNEV++LRNESLAKDKAL KE++AH +Q RD LRL++N + YR
Sbjct: 446 VKEQVDLLIARFLKQEDGEKAQSADLDVLSTQVSELEAEVAQWLVEENKQKKLVTMLTAQRELKAREATSALTAERQTQQELKTKELVIFDLAKKWNETTNHLREFSALYDVVKNERNKYVNLIQASTQALAEMKEKIKILHNEVEVLRNESLAKDKALVKEKLAHSTAQCSRDSLRLDTNKSHDAYR 633
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: A0A662X8Z1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8Z1_9STRA) HSP 1 Score: 200 bits (508), Expect = 3.910e-56 Identity = 114/188 (60.64%), Postives = 145/188 (77.13%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++Q VD+ +ARFL +E E + +L AL +V LEAEV QW EE +Q++L+A+L QR++K EA A AE+ T Q++KMK+LVI DL+K+ N+T N L+EFSALYDVVKNERNKYVNLIQAS QALAEMKEKIKILHNEV++LRNESLAKDKAL KE++AH +Q RD LRL++N + YR
Sbjct: 446 VKQQVDLLIARFLKREDGEKEQGVELEALSVQVTELEAEVAQWVVEESKQKRLIAMLTAQRELKAREATSALAAERQTQQELKMKELVIFDLAKKWNETTNHLREFSALYDVVKNERNKYVNLIQASTQALAEMKEKIKILHNEVEVLRNESLAKDKALVKEKLAHATAQCSRDSLRLDTNKSHDAYR 633
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Match: H3G9R9_PHYRM (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=H3G9R9_PHYRM) HSP 1 Score: 199 bits (505), Expect = 7.340e-56 Identity = 113/188 (60.11%), Postives = 145/188 (77.13%), Query Frame = 1
Query: 1 MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQRKLVALLKGQRDIKQAEALRAQQAEKDTAQQVKMKQLVIADLSKRCNDTNNLLKEFSALYDVVKNERNKYVNLIQASHQALAEMKEKIKILHNEVDILRNESLAKDKALKKERVAHRASQAQRDGLRLESNNASMHYR 564
++Q VD+ +ARFL QE + ++ ++L AL +V LE+EV QW EE +Q+KLV +L QR++K EA A AE+ T Q++K K+LVI DL+K+ N+T N L+EFSALYDVVKNERNKYVNLIQAS QALAEMKEKIKILHNEV++LRNESLAKDKAL KE++AH +Q RD LRL++N + YR
Sbjct: 372 VKQQVDLLIARFLKQEDGDKTQSTELEALSAQVTQLESEVAQWLVEESKQKKLVTMLTAQRELKAREATSALTAERQTQQELKTKELVIFDLAKKWNETTNHLREFSALYDVVKNERNKYVNLIQASTQALAEMKEKIKILHNEVEVLRNESLAKDKALVKEKLAHATAQCSRDSLRLDTNKSHDAYR 559 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16256.4256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16256.4256.1 >prot_E-fasciculatus_F_contig16256.4256.1 ID=prot_E-fasciculatus_F_contig16256.4256.1|Name=mRNA_E-fasciculatus_F_contig16256.4256.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp MRQDVDIGLARFLSQEMAENSKRSDLAALLEEVDGLEAEVLQWGEEEKRQback to top mRNA from alignment at E-fasciculatus_F_contig16256:734..2775- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16256.4256.1 ID=mRNA_E-fasciculatus_F_contig16256.4256.1|Name=mRNA_E-fasciculatus_F_contig16256.4256.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2042bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16256:734..2775- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16256:734..2775- >mRNA_E-fasciculatus_F_contig16256.4256.1 ID=mRNA_E-fasciculatus_F_contig16256.4256.1|Name=mRNA_E-fasciculatus_F_contig16256.4256.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16256:734..2775- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |