mRNA_E-fasciculatus_F_contig1625.4253.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A6H5KZH6_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH6_9PHAE) HSP 1 Score: 720 bits (1858), Expect = 4.500e-244 Identity = 452/573 (78.88%), Postives = 469/573 (81.85%), Query Frame = 3
Query: 588 VYSLEIYPELRAMVGAEATAQAFACTSGVREHEENALRVLFRAFVTANTDVVTAQVSNLVERLKSEFCHGPAGKLCNETNRSNGNDGTYVVDVXXXXXXXXXXXXXXXXXXXXXXXXXDNDDDGLSAWRGKSPSFANRVSSSVPARHRNFGAICEDGEDSDMVAAEIQQEEGLRGAGGKLDGDRSGLEKAEMDIVHVRGDGDSEDLKNEEMQMLNVADGASDGTAETADGVTDNEDINTEEDDSSQSHRRPRPDGHDRASDLSSSNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHGVHGVATISSTEKGQLASSMRHNAXXXXXXXXXXXXXXGIPSCAFRRRGWSSSILAFSDVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQKLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINYAEGCEE 2306
VYSLEIYPELRAMVGAEATAQAFAC SGVREHEENALRVLFR VTANTDVVTAQV+NLVERLKSEF HG A KLC E+NRSN N G +VVDV XXXXXXXXXXXX DN DD LS WRGKS SFA+RVSSS P RHRNFGAICEDGEDSDMVAAEIQQE LR A DSE+LKN++MQML+V DG SDGTA+TAD VTDNED++TEEDDSSQSHR PR +GHDRA ++ XXXXXXXX XXXXXXXXXXXXXXX NHGVHGVA ISST K LASS+RHNA XXXXXXXXX IP CAFRRRGWSSSILAF+DVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQ CSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTG A AGNG Q+LCRG AFFVPA TTVVYTNS VAGEAA LWVCLARSNINY E CEE
Sbjct: 173 VYSLEIYPELRAMVGAEATAQAFACNSGVREHEENALRVLFRGLVTANTDVVTAQVNNLVERLKSEFRHGRAEKLCTESNRSNSNGGLHVVDVNYNGPGHSRGXXXXXXXXXXXXSI-DNADDELSTWRGKSDSFADRVSSSDPVRHRNFGAICEDGEDSDMVAAEIQQEGVLRVASXXXXXXXXXXXXXXXXXXXXXXXXDSENLKNQQMQMLHVVDGGSDGTADTADEVTDNEDMHTEEDDSSQSHRHPRTNGHDRAR----NSXXXXXXXXXXISTVHTSNNXXXXXXXXXXXXXXXGYASANHGVHGVAGISSTGKDHLASSVRHNAAXXXXXXXXX-----IPPCAFRRRGWSSSILAFADVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQCCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGVACAGNGTQRLCRGMAFFVPAETTVVYTNSCVAGEAA-LWVCLARSNINYPESCEE 734
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: D7FIF5_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF5_ECTSI) HSP 1 Score: 337 bits (863), Expect = 5.290e-105 Identity = 170/178 (95.51%), Postives = 172/178 (96.63%), Query Frame = 3
Query: 1776 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQKLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINYAEGCEES 2309
MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALA+VMAGTGFA AGNGRQ+LCRG AFFVPA TTVVYTNS VAGEAA LWVCLARSNINY EGCEES
Sbjct: 1 MMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAVVMAGTGFACAGNGRQRLCRGMAFFVPAETTVVYTNSCVAGEAA-LWVCLARSNINYPEGCEES 177
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A6H5KTB4_9PHAE (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB4_9PHAE) HSP 1 Score: 228 bits (580), Expect = 2.350e-61 Identity = 116/170 (68.24%), Postives = 134/170 (78.82%), Query Frame = 3
Query: 1710 EDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQKLCRGRAFFVPAGTTVVY 2219
ED +++L+ RL++EYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDI+EVMARSDNVVRVALTPKHRDVPLLC+ILTYNMGAPPIV PIQVDQ C R+TPPIKDFE+ D++VP G EY PV ++ +V+ G G A G L G FV A + +
Sbjct: 270 EDYYVQDLMRRLSKEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDIMEVMARSDNVVRVALTPKHRDVPLLCEILTYNMGAPPIVAPIQVDQCCHRFTPPIKDFELDDMKVPEGSEYTPLAIPVPSICMVLEGVGSASDGVRDTVLRPGVVVFVAARSVATF 439
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A835YY41_9STRA (Mannose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY41_9STRA) HSP 1 Score: 206 bits (524), Expect = 4.810e-54 Identity = 107/195 (54.87%), Postives = 144/195 (73.85%), Query Frame = 3
Query: 1710 EDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNG--RQKLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINY 2288
E+ ++ +L+LRL EEYPGDIGIMMPLLLNYLR+ G++FFM ANEPHAYL+GDI+EVMARSDNVVRVALTPK+RDVPLLC ILTY MGAPP+V P +V +C R+TPP+ DFE+ + +PH Q+++ V ++ +V+ GTG+A +G ++L G + FVPA V + +S A L V +A +NI++
Sbjct: 258 EERSIHKLMLRLNEEYPGDIGIMMPLLLNYLRLEPGQAFFMGANEPHAYLRGDIMEVMARSDNVVRVALTPKYRDVPLLCDILTYKMGAPPLVLPRRVSPYCLRFTPPVADFELEVVTLPHAQQFSFDSIKVPSIFLVLGGTGWATDDDGGAEKELWSGVSMFVPARCAVNFRATSTD---APLLVAVAHTNIHW 449
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A0R5QMD0_SACJA (Mannose-6-phosphate isomerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD0_SACJA) HSP 1 Score: 163 bits (412), Expect = 4.240e-39 Identity = 91/207 (43.96%), Postives = 131/207 (63.29%), Query Frame = 3
Query: 1680 SDVTGQRRAKEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTG---FARAGNGRQ-KLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINY 2288
++ +R KE+ + ++LRL+ EYPGD+GI+MPL+LN L + G++FFM +EPHAYL+GDILE MA S+NVVR ALTPK+RDV LL +L+YNM AP ++ P VD R+TPP+ DFE+ DI VP Y P PV A+ + + GT G++ + G FF+PA T V+G+ + L + +A +N+N+
Sbjct: 265 AEALDKRMKKENPDVVRVMLRLSTEYPGDLGILMPLVLNLLMLKTGKAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKYRDVDLLVDMLSYNMAAPAVLHPHTVDDNRKRFTPPVADFEIEDIHVPANDVYGLEPMPVPAVLVTLKGTQGGLLLDEDTGKEIEAAAGGIFFLPANTHCTL----VSGKLSELHIAMAHTNLNW 467
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: D7FPP3_ECTSI (Mannose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPP3_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.950e-38 Identity = 87/173 (50.29%), Postives = 113/173 (65.32%), Query Frame = 3
Query: 1707 KEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQ----KLCRGRAFFVPAGTTV 2213
+ED + ++LRL++EYPGD+GI+MPL+LN L + G +FFM +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ VD RYTPPI DFE+ +QVP + Y PV + + + G R + K C G FF+PA T V
Sbjct: 361 REDADSQRVMLRLSKEYPGDLGILMPLMLNLLHLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMPVPVVMVALEGGDGGRVIESKTDREIKACEGGVFFLPAFTPV 533
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A0R5QMD6_SACJA (Mannose-6-phosphate isomerase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A0R5QMD6_SACJA) HSP 1 Score: 164 bits (414), Expect = 2.180e-38 Identity = 94/198 (47.47%), Postives = 130/198 (65.66%), Query Frame = 3
Query: 1707 KEDLALRELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFAR---AGNGRQ-KLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINY 2288
+ED + ++LR ++EYPGD+GI+MPL+LN L++ G +FFM +EPHAYL+GDILEVMA S+NVVR ALTPK RDV LL ++LTYNMGAP ++ VD RYTPPI DFE+ +QVP + Y V + + +AG R + +GR+ K C G FF+PA T VV S G+ + + LA +N+++
Sbjct: 409 REDADSQRVMLRPSKEYPGDLGILMPLMLNLLQLKPGLAFFMTVDEPHAYLRGDILEVMACSNNVVRAALTPKFRDVNLLVEMLTYNMGAPAVLPAETVDACRKRYTPPINDFEIQILQVPANERYELEAMEVPVVMVALAGGADGRVIESESGREIKACEGGVFFLPAYTPVVVC-SGTKGDG--IKMALAHTNLHW 603
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A1Y1I1U7_KLENI (Mannose-6-phosphate isomerase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1U7_KLENI) HSP 1 Score: 154 bits (390), Expect = 1.220e-36 Identity = 78/164 (47.56%), Postives = 103/164 (62.80%), Query Frame = 3
Query: 1728 ELILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQKLC----RGRAFFVPAGT 2207
+LILRL E+YPGD+G+ P LNY+ + GES ++AANEPHAYL G+ +E MA SDNVVR LTPK RD +LC +LTYN G P I+ +D RY PP ++FE+ I+VP G Y P P ++ +V +G G A G G + +G FF+PA T
Sbjct: 226 KLILRLNEQYPGDVGVFCPYFLNYITLSPGESIYLAANEPHAYLSGECVECMATSDNVVRAGLTPKLRDTDVLCSMLTYNQGKPEILKGQPIDSHTRRYIPPFEEFEIDSIEVPKGTSYKLPFIPGPSIVLVQSGVGLATQGQGNAQRAFGVKKGDVFFLPAET 389
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: A0A7N0SZV4_KALFE (Mannose-6-phosphate isomerase n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0SZV4_KALFE) HSP 1 Score: 153 bits (387), Expect = 3.530e-36 Identity = 78/180 (43.33%), Postives = 111/180 (61.67%), Query Frame = 3
Query: 1701 RAKEDLALREL------ILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAGNGRQKLCRGRAFFVPAGTTVVYT 2222
R + ++ LREL +LRL E+YPGD+G++ LNY+R+ GE+ ++ ANEPHAYL G+ +E MA SDNVVR LTPK RDVP LC +LTY G P I+ + V+ + +Y PP +FE+ +P G A P P ++ +VMAG G A + R+++ G FFV A ++ T
Sbjct: 240 RLQSEIQLRELKERELLVLRLEEQYPGDVGVISAFFLNYVRLKPGEALYLGANEPHAYLSGECVECMAASDNVVRAGLTPKLRDVPTLCSMLTYKQGHPEILRGVSVNPYIKKYLPPFDEFEVDSCALPQGASTAFPAVPGPSIFLVMAGQGTIEADSLREEIAEGDVFFVAADCEILLT 419
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Match: D8LB30_ECTSI (Mannose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB30_ECTSI) HSP 1 Score: 150 bits (380), Expect = 6.290e-35 Identity = 87/193 (45.08%), Postives = 122/193 (63.21%), Query Frame = 3
Query: 1731 LILRLAEEYPGDIGIMMPLLLNYLRMGEGESFFMAANEPHAYLKGDILEVMARSDNVVRVALTPKHRDVPLLCQILTYNMGAPPIVTPIQVDQFCSRYTPPIKDFEMLDIQVPHGQEYATPPAPVAALAIVMAGTGFARAG------NGRQ-KLCRGRAFFVPAGTTVVYTNSSVAGEAAALWVCLARSNINY 2288
++LRL+ EYPGD+GI+MPL+LN L + G++FFM +EPHAYL+GDILE MA S+NVVR ALTPK RDV LL +LTYNM AP ++ P +D R+TPP+ FE+ I VP Y P PV A+ + + G A+ G G++ G FF+PA T + V+G+ + L + +A +N+N+
Sbjct: 285 VMLRLSTEYPGDLGILMPLVLNLLMLKTGQAFFMTVDEPHAYLRGDILECMACSNNVVRCALTPKFRDVDLLVDMLTYNMAAPAVLRPHIIDDNRKRFTPPVDVFEIEMINVPGNDAYRLNPMPVPAVLVTLHG---AQGGLLLDEDTGKEIPAAEGGIFFLPANTYC----TMVSGKTSDLRIAMAHTNLNW 470 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1625.4253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1625.4253.1 >prot_E-fasciculatus_F_contig1625.4253.1 ID=prot_E-fasciculatus_F_contig1625.4253.1|Name=mRNA_E-fasciculatus_F_contig1625.4253.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=563bp MVGAEATAQAFACTSGVREHEENALRVLFRAFVTANTDVVTAQVSNLVERback to top mRNA from alignment at E-fasciculatus_F_contig1625:10965..16995- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1625.4253.1 ID=mRNA_E-fasciculatus_F_contig1625.4253.1|Name=mRNA_E-fasciculatus_F_contig1625.4253.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6031bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1625:10965..16995- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1625:10965..16995- >mRNA_E-fasciculatus_F_contig1625.4253.1 ID=mRNA_E-fasciculatus_F_contig1625.4253.1|Name=mRNA_E-fasciculatus_F_contig1625.4253.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3378bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1625:10965..16995- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |