mRNA_E-fasciculatus_F_contig1621.4229.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1621.4229.1 vs. uniprot
Match: D7FWR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR2_ECTSI) HSP 1 Score: 874 bits (2257), Expect = 1.470e-310 Identity = 541/739 (73.21%), Postives = 569/739 (77.00%), Query Frame = 1
Query: 1 MDNLDRLESALWEAHGREARAAALLETRNLQHTHTTERAALEADLQRRRERLDEACSRQVRTLLQAHDEQLAQVDPTALPTAVGDGGGPHEDKAEHNEPPLTTITTDSVEIRQLAGAVVAAAPDAGTRSSEMIDIPSATLSTVAECLQEGGQQEQAQTKDGQKGQRSGHESLPGTRHEKLHTPPAGMGSAASAVTTAVTGTVI-DHTRSNRELVGLRSDLERHLAVVAHVVDRGRYLKEATRVMREIEELEARDKANARGGLGTISLEKATLLQKQAQAKEIQADKHHQLRRALESLGAEELRLLSARQKGSLGRLANRSREGTRRRKMELRGKLAAVKRSIAREWREHNRSHCRRSDGLLSSGGVDEGASRKRRVATGHGAGGRGIVASSAG--QQQDPAHGEKRGGGDTTTDKSDVGEREAEIGTIEGGGQGDTGIXXXXXXXXXXXEAGAGTGMAEGPSGGISATGVNLVLSGNHEPDHVECTAGTLSLNTVAAAMIESKAENGKRTVPDLESGTNKAQAEVRTGVPTIPSCQPSAXXXXXXXXXXXXXXXXXXXXXXV--AARAAAAYPASAVDTSLSKGNADDAFTVAGA-FGVLSEEEAQALAALGRGAPSDARLLLLVSSPSPAREGPQRHQLEPSSLAYQRLVLHEESEQTAEVHRDGFEIGGYHGNGDGGDDDVLGVKGVSGGGTTSS-CTKRGGYLEKVLDSAMDKLGREIQAEEDLSRRRLGMTPVPS 2196
MDNLD LESALWEAHGREARAA LLETRNL+ TH +ERAALEADLQRRRERL+EACSRQVRTLLQAH+EQL QVDPTA TAVGDGGG EDK +H+EPP T TTDSVEIR LAGA AAP+AGTRSSE I IP+ATL TVAECLQE G+QE+AQTKDGQK QR GHESLP TRHEKL P AGMGSAA V TAVTG V+ D TRSNRELVGLRSDL RHLA VAHVVDRGRYLKEATRVMREIEELEARDK NARGG GTISLEKATLLQKQAQAKE+QADKH++LRRALESLGAEELRLLSARQKGSLGRLA RSREGTRRR+MELRGKLA VKRSIAREWREHNRS CRRS GLLSS VDEGA QQQDP HG+KR XXXX XX EAGAGTG AEGPSGGISATGV+LVLSGNH PDHVECT G L L+TVAAA+++ K+ENG T PDLESGTNKAQA+ T VP S QP A XXX AARAAAAY SA DTSL K ADDA T G FGVLSEEEAQALAALGRGAPSDARLLLL SSPSPAR+G Q+ QLEPSS AYQ LVLH ESEQTAEV RDGFEIG YHGNGD GDD VLG+ GVSGGGTT+S TKRGGYLE+VLDSAMDKL REIQAEEDLSRRRLGMTPVPS
Sbjct: 1 MDNLDGLESALWEAHGREARAAVLLETRNLRRTHASERAALEADLQRRRERLEEACSRQVRTLLQAHNEQLTQVDPTAFATAVGDGGGSREDKVKHDEPPPMT-TTDSVEIRPLAGA---AAPEAGTRSSETIGIPAATLPTVAECLQEAGRQEEAQTKDGQKEQRFGHESLPRTRHEKLQLPFAGMGSAAPVVATAVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRYLKEATRVMREIEELEARDKTNARGGFGTISLEKATLLQKQAQAKEVQADKHNRLRRALESLGAEELRLLSARQKGSLGRLAARSREGTRRRQMELRGKLAVVKRSIAREWREHNRSQCRRSGGLLSSDDVDEGAXXXXXXXXXXXXXXXXXXXXXXXXXQQQDPVHGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXGTXXGAEEAGAGTGKAEGPSGGISATGVSLVLSGNHGPDHVECTTGRLPLDTVAAAVVQGKSENGTGTAPDLESGTNKAQAKGPTAVPATQSNQPPAPTAGFTSRASKDRGERRLRXXXXXXAARAAAAYLVSAADTSLPKDTADDALTAGGGTFGVLSEEEAQALAALGRGAPSDARLLLLASSPSPARDGRQQRQLEPSSRAYQGLVLHGESEQTAEVQRDGFEIGDYHGNGDVGDDYVLGIGGVSGGGTTTSNSTKRGGYLEEVLDSAMDKLAREIQAEEDLSRRRLGMTPVPS 734
BLAST of mRNA_E-fasciculatus_F_contig1621.4229.1 vs. uniprot
Match: A0A6H5JDU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU2_9PHAE) HSP 1 Score: 793 bits (2047), Expect = 3.020e-279 Identity = 500/744 (67.20%), Postives = 532/744 (71.51%), Query Frame = 1
Query: 1 MDNLDRLESALWEAHGREARAAALLETRNLQHTHTTERAALEADLQRRRERLDEACSRQVRTLLQAHDEQLAQVDPTALPTAVGDGGGPHEDKAEHNEPPLTTITTDSVEIRQLAGAVVAAAPDAGTRSSEMIDIPSATLSTVAECLQEGGQQEQAQTKDGQKGQRSGHESLPGTRHEKLHTPPAGMGSAASAVTTAVTGTVI-DHTRSNRELVGLRSDLERHLAVVAHVVDRGRYLKEATRVMREIEELEARDKA----NARGGLGTISLEKATLLQKQAQAKEIQADKHHQLRRALESLGAEELRLLSARQKGSLGRLANRSREGTRRRKMELRGKLAAVKRSIAREWREHNRSHCRRSDGLLSSGGVDEGASRKRRVATGHGAGGRGI--VASSAGQQQDPAHGEKRGGGDTTTDKSDVGEREAEIGTIEGGGQGDTGIXXXXXXXXXXXEAGAGTGMAEGPSGGISATGVNLVLSGNHEPDHVECTAGTLSLNTVAAAMIESKAENGKRTVPDLESGTNKAQAEVRTGVPTIPSCQPSAXXXXXXXXXXXXXXXXXXXXXX--VAARAAAAYPASAVDTSLSKGNADDAFTVAGA-FGVLSEEEAQALAALGRGAPSDARLLLLVSSPSPAREGPQRHQLEPSSLAYQRLVLHEESEQTAEVHRDGFEIGGYHGNGDGGDDDVLGVKGVSGGGTTSSCT-KRGGYLEKVLDSAMDKLGREIQAEEDLSRRRLGMTPVPSW 2199
MDNLD LESALWEAHGREARA ALLETRNL+ AH+EQL QVDPTA TAVGDGGG EDK EH+EPP T TTDSVEIR LAGA AAP+A TRSSE IDIP+ATL TVAECLQE G+Q +AQT+DGQKGQR HESLPGTRHEKL P A M +AASAV TAVTG V+ D TRSNRELVGLRSDL RHLA VAHVVDRGR+LKEATRVMREI++LEARDKA NARGGLGTI+LE ATLLQKQAQAKE+QADKHH+LRRALESLG EELRLLSARQKGSLGRLA SRE TRRR+MELRGKLAAVKRSIAREWREHNRSHCRRS GLLSS V V SAGQ QDP HG+K XXX EAGAG G EGP GGISATGVNLVLSGNHEPD +ECT GTL L+TV+AA +E K+E+G TVPDLESGTNKAQAEVRT VP QP A VAARAAAAY ASA DTSLSK A+DA T G F VLSEEEAQALAALGRGAPSDARLLLLVSSPSPAR+GPQ+HQ E SS AYQ LVLHEESEQTAEV RDG EIG YHGNGDGGDD+VLGV GVSGGGTT+S + KRGG LEKVLDSAM+KL REIQAE DLSRR+LGMTPVPSW
Sbjct: 1 MDNLDGLESALWEAHGREARAVALLETRNLR----------------------------------AHNEQLTQVDPTAFTTAVGDGGGSREDKVEHDEPPPMT-TTDSVEIRPLAGA---AAPEASTRSSETIDIPTATLPTVAECLQEAGRQGEAQTEDGQKGQRFRHESLPGTRHEKLQLPFAAMRTAASAVATAVTGAVVVDRTRSNRELVGLRSDLGRHLAAVAHVVDRGRHLKEATRVMREIDKLEARDKAEVGANARGGLGTINLETATLLQKQAQAKEVQADKHHRLRRALESLGVEELRLLSARQKGSLGRLAAHSRERTRRRQMELRGKLAAVKRSIAREWREHNRSHCRRSGGLLSSDDVXXXXXXXXXXXXXXXXXXXXXXSVVPSAGQHQDPVHGKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXGGTERGAKEAGAGPGKGEGPDGGISATGVNLVLSGNHEPDDLECTTGTLPLDTVSAAAVEEKSEDGTGTVPDLESGTNKAQAEVRTAVPATQPNQPPAPTAGFTIRASKDRGERRLRTRRKRVAARAAAAYLASAADTSLSKDTANDALTAGGGTFSVLSEEEAQALAALGRGAPSDARLLLLVSSPSPARDGPQQHQFESSSRAYQGLVLHEESEQTAEVQRDGSEIGDYHGNGDGGDDEVLGVGGVSGGGTTTSNSIKRGGSLEKVLDSAMNKLAREIQAEHDLSRRQLGMTPVPSW 705 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1621.4229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1621.4229.1 >prot_E-fasciculatus_F_contig1621.4229.1 ID=prot_E-fasciculatus_F_contig1621.4229.1|Name=mRNA_E-fasciculatus_F_contig1621.4229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=734bp MDNLDRLESALWEAHGREARAAALLETRNLQHTHTTERAALEADLQRRREback to top mRNA from alignment at E-fasciculatus_F_contig1621:11175..14113- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1621.4229.1 ID=mRNA_E-fasciculatus_F_contig1621.4229.1|Name=mRNA_E-fasciculatus_F_contig1621.4229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2939bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1621:11175..14113- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1621:11175..14113- >mRNA_E-fasciculatus_F_contig1621.4229.1 ID=mRNA_E-fasciculatus_F_contig1621.4229.1|Name=mRNA_E-fasciculatus_F_contig1621.4229.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1621:11175..14113- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |