mRNA_E-fasciculatus_F_contig16206.4224.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16206.4224.1 vs. uniprot
Match: A0A6H5K4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T0_9PHAE) HSP 1 Score: 449 bits (1154), Expect = 2.980e-148 Identity = 307/408 (75.25%), Postives = 329/408 (80.64%), Query Frame = 1
Query: 1 VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAFLKRILTELSLVAYQRKGGLSEELFQGLEERMEDPRSPGAALVLYEGLVPHFPPYKSGGSSXXXXXXXXXXXXXXXXXXXXXPREVLRRQEEAHGQSCLEREADWEARVVEAMAAADATRRTRNRRRSSRKALPQRICVESLSALSESGLLSREQMAANAFARRVGFKRGVGLPMPASVEWRRRKRMAEAXXXXXXXXXXXXXXXXRYTMAGRRPXXXXXXXXXXR---------MEIEESDESQLSGDGGGIFARSPVVGVGGEGAGERHKRQRTGNTMGHQSDDDGSRKSRSGAGEDEQARVLVRDVRRRFHRFGGTTPAAPGAPIEINNADLTEHLRAVMPTCSRGKWAILSGLKIRLASQRRRAADAGW 1197
VLQPRPWGD LAPSGGGQEAANSQVLE A+LKR+LTELS+VAYQR+GGLSEEL QGLEERMEDPRSPG+AL+LYEGLVP F Y+ GG XXXXXXXXXXXXXXXXXXXXX EEAH +SCL+REA WEARV E MAAA R++RN+RRS A +R+ VESLSA SESG LSREQ+AAN FARRVG KRGVGL MPAS EWRR+KRMAEA XXXXXXXXXXXXXXX XXXXXXXXXX ME+EE DES+LS DGGG+ ARS VVGVG EGAGE+ KR RTGN M HQSDDDGSRKSRSGAGEDEQAR LVRDVRRRFHRFGGT PAAPG IEINNADLTEHLRAVMPTCSR W +LSGLK RLASQRRRAAD+GW
Sbjct: 361 VLQPRPWGDALAPSGGGQEAANSQVLE-------AYLKRVLTELSVVAYQRRGGLSEELLQGLEERMEDPRSPGSALILYEGLVPRFRRYQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EEAHRRSCLKREAGWEARVAEVMAAAHGGRKSRNKRRSLTNAPSRRVGVESLSAWSESGWLSREQVAANEFARRVGVKRGVGLSMPASAEWRRKKRMAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMELEECDESRLSVDGGGLDARSSVVGVGREGAGEKRKRHRTGNDMAHQSDDDGSRKSRSGAGEDEQARTLVRDVRRRFHRFGGTIPAAPGGRIEINNADLTEHLRAVMPTCSRESWELLSGLKTRLASQRRRAADSGW 758
BLAST of mRNA_E-fasciculatus_F_contig16206.4224.1 vs. uniprot
Match: D7FYX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX3_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 3.450e-146 Identity = 300/399 (75.19%), Postives = 314/399 (78.70%), Query Frame = 1
Query: 1 VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAFLKRILTELSLVAYQRKGGLSEELFQGLEERMEDPRSPGAALVLYEGLVPHFPPYKSGGSSXXXXXXXXXXXXXXXXXXXXXPREVLRRQEEAHGQSCLEREADWEARVVEAMAAADATRRTRNRRRSSRKALPQRICVESLSALSESGLLSREQMAANAFARRVGFKRGVGLPMPASVEWRRRKRMAEAXXXXXXXXXXXXXXXXRYTMAGRRPXXXXXXXXXX-RMEIEESDESQLSGDGGGIFARSPVVGVGGEGAGERHKRQRTGNTMGHQSDDDGSRKSRSGAGEDEQARVLVRDVRRRFHRFGGTTPAAPGAPIEINNADLTEHLRAVMPTCSRGKWAILSGLKIRLASQRRRAADAG 1194
VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQA+LKR+LTELS+VAYQR+GGLSEEL QGLEERMEDPRSPG+ALVLYEGLVP FP Y+SGGS XXXXXXXXXXXXXXXX PREVLRR+E AH +SCLEREA WEARV E MAAAD +AAN FARRVGFKRGVGL MPAS EWRR+KRMAEA XXXXXXXXXXXXXXX XXXXXXXXXX +MEIEE DES+LS DGGGI AR VVGV EG GER KRQ TGN M QSDDDG+RKSRSG+GEDEQAR LVRDVRRRFHRFGGTTPAAPG IEINNADLTEHLRAVMPTCSR WAILSGLK RLASQRRRAADAG
Sbjct: 396 VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAYLKRVLTELSVVAYQRRGGLSEELLQGLEERMEDPRSPGSALVLYEGLVPRFPRYESGGSXXXXXXXXXXXXXXXXXED---PREVLRREEGAHRRSCLEREAGWEARVAEVMAAADG-------------------------------------VAANEFARRVGFKRGVGLSMPASAEWRRKKRMAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQMEIEECDESRLSVDGGGIDARPSVVGVRDEGVGERRKRQSTGNNMDDQSDDDGNRKSRSGSGEDEQARALVRDVRRRFHRFGGTTPAAPGGRIEINNADLTEHLRAVMPTCSRESWAILSGLKARLASQRRRAADAG 754
BLAST of mRNA_E-fasciculatus_F_contig16206.4224.1 vs. uniprot
Match: A0A6H5KTJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ7_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.190e-28 Identity = 83/209 (39.71%), Postives = 115/209 (55.02%), Query Frame = 1
Query: 1 VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAFLKRILTELSLVAYQRKGGLSEELFQGLEERMEDPRSPGAALVLYEGLVPHFPPYKSGGSSXXXXXXXXXXXXXXXXXXXXXPREVLRRQEEAHGQSCLEREADWEARVVEAMAAADATRRTRNRRRSSRKALPQRI-CVESLSALSESGLLSREQMAANAFARRVGFKRGVGL 624
VL+ RPWG+P P GG+EAA S VL+L+S A Q +LK IL EL++VAYQRKGGLS EL G+E R+ DP L + LVP P ++ PR +L + EEAH + C ERE W+ + + + A+ R+ R RR ++K P E + ++SG LS+EQ+A + FARRV K G+G+
Sbjct: 469 VLKERPWGNPREPLEGGKEAAGSDVLKLMSFAAQYYLKNILDELAVVAYQRKGGLSAELLSGVESRLRDPSVKDPKAELRQSLVPRLPSVRN------------------------LPRVILEKTEEAHRKECEEREERWDVELADTLTTAEEVRK-RLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGV 652
BLAST of mRNA_E-fasciculatus_F_contig16206.4224.1 vs. uniprot
Match: D8LCB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB6_ECTSI) HSP 1 Score: 127 bits (318), Expect = 6.100e-28 Identity = 83/209 (39.71%), Postives = 113/209 (54.07%), Query Frame = 1
Query: 1 VLQPRPWGDPLAPSGGGQEAANSQVLELISAATQAFLKRILTELSLVAYQRKGGLSEELFQGLEERMEDPRSPGAALVLYEGLVPHFPPYKSGGSSXXXXXXXXXXXXXXXXXXXXXPREVLRRQEEAHGQSCLEREADWEARVVEAMAAADATRRTRNRRRSSRKALPQRI-CVESLSALSESGLLSREQMAANAFARRVGFKRGVGL 624
VL+ RPWG+P P GG+EAA S VL+L+S A Q +LK +L EL++VAYQRKGGLS EL G+E R+ DP L + LVP P + PR L R EEAH + C ERE W+ + + + A+ R+ R RR ++K P E + ++SG LS+EQ+A + FARRV K G+G+
Sbjct: 268 VLKERPWGNPREPLEGGKEAAGSDVLKLMSLAAQYYLKNMLDELAVVAYQRKGGLSAELLSGVESRLRDPSVKDPKAELRQSLVPRLPRVQD------------------------LPRVTLERTEEAHRKECEEREERWDVELADTLTTAEEVRK-RLIRRGTKKLPPGSFKWWEDMETRAKSGWLSKEQLAGSEFARRVAVKHGIGV 451 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16206.4224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16206.4224.1 >prot_E-fasciculatus_F_contig16206.4224.1 ID=prot_E-fasciculatus_F_contig16206.4224.1|Name=mRNA_E-fasciculatus_F_contig16206.4224.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=334bp MEDPRSPGAALVLYEGLVPHFPPYKSGGSSETIITATTGTPAAAAATTTEback to top mRNA from alignment at E-fasciculatus_F_contig16206:2..2779+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16206.4224.1 ID=mRNA_E-fasciculatus_F_contig16206.4224.1|Name=mRNA_E-fasciculatus_F_contig16206.4224.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2778bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16206:2..2779+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16206:2..2779+ >mRNA_E-fasciculatus_F_contig16206.4224.1 ID=mRNA_E-fasciculatus_F_contig16206.4224.1|Name=mRNA_E-fasciculatus_F_contig16206.4224.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2004bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16206:2..2779+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |