mRNA_E-fasciculatus_F_contig16203.4223.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig16203.4223.1 vs. uniprot
Match: A0A6H5KDN4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN4_9PHAE) HSP 1 Score: 467 bits (1201), Expect = 6.020e-142 Identity = 460/734 (62.67%), Postives = 481/734 (65.53%), Query Frame = 1
Query: 64 EERRVASFLGMERFDVGFGGGDAEDEWVDDLDPGYMVMAVSEQEFQPHLSGSDHPHPRALDVAVHAADNGPGGGVDAPPKDLLEAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SWAGRSI--DDFGWEEEEGRPRQRRASSDEGGASRERLLAVA------------------------------------------DEVGGSRESERAGDDDGGYGEGGLYERDLEDAVALLENDGFVLNGKQPEAWRSESFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RPLDIAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQFVDGGYDDDGRGGGESAGCGDANEXXXXXXESVEGRPSSRRKDSFVFSETSAGSVGGGESGAGAAEGGAPASFDPMSPVWPKIAADFAFSQEDCGESSAFLRREREVLASSDEVEISRENSAKTTPLDRVRWPGHASGREERTGEKHGQXXXXXXXXXXXXXXXXXXXXSGLSGREEGAFQEADHAPSARNDLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDGMGDGSLSPFDPQHXXXXXXXXXXXXXXXXXXXGHEVTLHLRADGDSLGPMTPERGDDGED-TTTSTIATATAAGATADAAAERGGLVGVLGDGAGVEWGGGSLIAEGLRGEEAPEE 2118
E RRVASFLGM RF+VG GGG AEDEWVDDLDPGYMVMAVSEQE P PRA++VA+HAADNGPGGGVDAP K+LLEA EXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SWAGRS D+FGWEEEE RPR RRASSDEG SR+RLLAV D VGGSR SERAGD D GYGEG LYERDLEDA ALLEN GF LNG QPEAWRSESFSSS XXXXXXXXXXXXXXX RPLDIA G XXXXX XXXXXXXXX ESAGCGDA EXXXX ESVE RP SRRKDSFVFSETSAGS G GE GA AAEGGAPASFDP+SPVWP++AADFAFSQEDCGESSAFL RERE LASSDE E+SRENSAKTTPLD VRW GHASGREERTGE++G XXXXXXXXXXXXX AFQEADH PSAR+DL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSLS FDPQ XXXX EV LHLRADG ++GP+ PERG DGED TTTS IATATA G T AAE G L+G+LG+GA VEWGGGSL+AEGLR EEA EE
Sbjct: 717 EGRRVASFLGMGRFEVGVGGGHAEDEWVDDLDPGYMVMAVSEQELH-----HGQPLPRAMEVAIHAADNGPGGGVDAPTKELLEADEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEAGVGLGESRRRSWAGRSSMDDEFGWEEEEDRPRPRRASSDEGRPSRDRLLAVGSSFPGQGEGDSCQGRAASDSSSAGRLWDEERRTGQRRRDEVTDGVGGSRASERAGDGDDGYGEGDLYERDLEDAAALLENGGFALNGNQPEAWRSESFSSSTGGDGVXXXXXXXXXXXXXXXEGEKYDAVACQEEQGERGGEPAAPAAAVGRGDDAGRPLDIAHGTRTTKAGVEAAASTVADSGXXXXXDWGNVXXXXXXXXXXXXXXXXXXXXXXXXXXESAGCGDATEXXXX--ESVESRPPSRRKDSFVFSETSAGSAGAGERGAEAAEGGAPASFDPLSPVWPRMAADFAFSQEDCGESSAFLSREREALASSDEAEVSRENSAKTTPLDGVRWLGHASGREERTGEENGPQLGXXXXXXXXXXXXXE------------AFQEADHTPSARHDLDHHVQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXGSLSAFDPQXXXXX----------------REVILHLRADGGTIGPVAPERGGDGEDPTTTSAIATATAGGTTP--AAEGGRLMGMLGNGADVEWGGGSLVAEGLRDEEASEE 1410
BLAST of mRNA_E-fasciculatus_F_contig16203.4223.1 vs. uniprot
Match: D8LPS1_ECTSI (Dual-specificity tyrosine-phosphorylation regulated kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS1_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 1.810e-126 Identity = 438/708 (61.86%), Postives = 453/708 (63.98%), Query Frame = 1
Query: 70 RRVASFLGMERFDVGFGGGDAEDEWVDDLDPGYMVMAVSEQEFQPHLSGSDHPHPRALDVAVHAADNGPGGGVDAPPKDLLEAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SWAGRSIDDFGWEEEEGRPRQRRASSDEGGASRERLLAVADEVGGSRESERAGDDDGGYGEGGLYERDLEDAVALLENDGFVLNGKQPEAWRSESFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RPLDIAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRQFVDGGYDDDGRGGGESAGCGDANEXXXXXX----------------ESVEGRPSSRRKDSFVFSETSAGSVGGGESGAGAAEGGAPASFDPMSPVWPKIAADFAFSQEDCGESSAFLRREREVLASSDEVEISRENSAKTTPLDRVRWPGHASGREERTGEKHGQXXXXXXXXXXXXXXXXXXXXSGLSGREEGAFQEADHAPSARNDLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDGMGDGSLSPFDPQHXXXXXXXXXXXXXXXXXXXGHEVTLHLRADGDSLGPMTPERGDDGEDT-TTSTIATATAAGATADAAAERGGLVGVLGDGAGVEWGGGSLIAEGLRGEEAPEE 2118
RRVASFLGMERF+VGFGGGDAEDEWVDDLDPGYMVMAVSEQE H P ++VA+HAADNGPGGGVDAPPKDLLEAGE XXXXXXXXXXXXXXX SWAGRS+ +FGWEEEE RPRQRRASSDEG VAD VGG RESERAGDDDGGYGEG LYERDLEDAVALLEN GF LNG QPEAWRSESFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPLDIA G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX ESVE RPSSRRKDSFVFS+TSAGS G GE GGAPASFDP SPVWP+IAADFAFSQEDCGESSAFL RERE LASSDE E+SRENSAKTTPLD VRWPGHASGREER GEKHG PQ XXXXXXXXXXXX EV LHLRADG ++GP+ PERG DGEDT TTS IATATA G T AAE G LVG+LGDG VEWGGGSL+AEGLR +EA EE
Sbjct: 675 RRVASFLGMERFEVGFGGGDAEDEWVDDLDPGYMVMAVSEQELH-------HAQPHPMEVAIHAADNGPGGGVDAPPKDLLEAGEEGDTAVAVSGGCAPSHESSDYGGDGXXXXXXXXXXXXXXXESRRRSWAGRSVGEFGWEEEEDRPRQRRASSDEG--------RVADGVGGGRESERAGDDDGGYGEGDLYERDLEDAVALLENGGFALNGNQPEAWRSESFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDGRPLDIAHGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVESRPSSRRKDSFVFSDTSAGSAGAGERXXXXXXGGAPASFDPRSPVWPRIAADFAFSQEDCGESSAFLSREREALASSDEAEVSRENSAKTTPLDGVRWPGHASGREERMGEKHG------------------------------------------------------------------------------------------------------PQ--LGIXXXXXXXXXXXXEQQQREVILHLRADGGTIGPVAPERGGDGEDTSTTSAIATATAGGTTP--AAEGGRLVGMLGDGVDVEWGGGSLVAEGLRDKEASEE 1261 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16203.4223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig16203.4223.1 >prot_E-fasciculatus_F_contig16203.4223.1 ID=prot_E-fasciculatus_F_contig16203.4223.1|Name=mRNA_E-fasciculatus_F_contig16203.4223.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=706bp EGGGEGRSGGVGGAGGHAEEEEERRVASFLGMERFDVGFGGGDAEDEWVDback to top mRNA from alignment at E-fasciculatus_F_contig16203:2..2823- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig16203.4223.1 ID=mRNA_E-fasciculatus_F_contig16203.4223.1|Name=mRNA_E-fasciculatus_F_contig16203.4223.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2822bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16203:2..2823- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig16203:2..2823- >mRNA_E-fasciculatus_F_contig16203.4223.1 ID=mRNA_E-fasciculatus_F_contig16203.4223.1|Name=mRNA_E-fasciculatus_F_contig16203.4223.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4236bp|location=Sequence derived from alignment at E-fasciculatus_F_contig16203:2..2823- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |